==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-AUG-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 21-SEP-04 1XI7 . COMPND 2 MOLECULE: CYSTEINE-RICH OMEGA-CONOTOXIN HOMOLOG VHV1.1; . SOURCE 2 ORGANISM_SCIENTIFIC: CAMPOLETIS SONORENSIS ICHNOVIRUS; . AUTHOR J.EINERWOLD,M.JASEJA,K.HAPNER,B.WEBB,V.COPIE . 47 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4343.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 26 55.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 27.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 19.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 6 A T 0 0 156 0, 0.0 2,-0.2 0, 0.0 16,-0.1 0.000 360.0 360.0 360.0 -70.5 -10.2 -1.4 -7.0 2 7 A a - 0 0 78 14,-0.1 14,-0.2 12,-0.1 2,-0.1 -0.452 360.0-133.5 -67.7 130.3 -7.5 0.6 -5.2 3 8 A I - 0 0 20 12,-1.6 14,-0.1 -2,-0.2 -1,-0.1 -0.286 10.3-154.2 -79.3 167.0 -6.2 -1.2 -2.2 4 9 A G - 0 0 27 1,-0.1 2,-0.3 38,-0.1 15,-0.2 0.793 53.5 -46.4-105.4 -77.7 -5.7 0.4 1.2 5 10 A H S S+ 0 0 117 1,-0.1 38,-0.2 39,-0.0 -1,-0.1 -0.896 109.3 11.6-166.9 134.0 -3.0 -1.2 3.4 6 11 A Y S S+ 0 0 142 36,-2.2 2,-0.3 -2,-0.3 37,-0.2 0.984 80.8 161.5 61.1 61.1 -2.1 -4.8 4.4 7 12 A Q E -A 42 0A 86 35,-1.1 35,-3.1 -3,-0.1 2,-0.4 -0.729 45.4 -96.2-110.9 161.4 -4.3 -6.6 1.9 8 13 A K E +A 41 0A 146 33,-0.3 33,-0.2 -2,-0.3 6,-0.2 -0.634 40.5 166.5 -79.7 125.8 -4.2 -10.1 0.6 9 14 A b > + 0 0 22 31,-1.6 3,-1.1 -2,-0.4 32,-0.2 0.687 68.8 63.8-107.6 -30.1 -2.4 -10.5 -2.7 10 15 A V T 3 S+ 0 0 90 30,-1.2 31,-0.1 1,-0.3 2,-0.1 0.981 117.0 26.1 -58.9 -61.6 -2.0 -14.3 -2.8 11 16 A N T 3 S+ 0 0 157 29,-0.3 -1,-0.3 1,-0.1 2,-0.2 -0.186 126.8 53.3 -96.8 40.6 -5.7 -15.1 -3.0 12 17 A A < - 0 0 24 -3,-1.1 2,-1.1 -5,-0.1 -1,-0.1 -0.678 62.7-155.3-175.3 115.7 -6.6 -11.8 -4.6 13 18 A D + 0 0 163 -2,-0.2 -4,-0.1 -3,-0.0 -3,-0.1 -0.699 41.7 143.9 -98.6 82.8 -5.3 -10.0 -7.7 14 19 A K - 0 0 114 -2,-1.1 2,-0.3 -6,-0.2 -12,-0.1 -0.919 54.1-104.1-122.2 147.7 -6.0 -6.3 -6.9 15 20 A P - 0 0 80 0, 0.0 -12,-1.6 0, 0.0 2,-1.1 -0.535 30.1-132.4 -72.3 124.8 -4.0 -3.1 -7.7 16 21 A c - 0 0 33 -2,-0.3 16,-0.4 -14,-0.2 -14,-0.1 -0.662 26.2-149.9 -81.3 99.7 -2.2 -1.7 -4.7 17 22 A a - 0 0 46 -2,-1.1 2,-0.5 -16,-0.1 15,-0.2 0.007 13.4-114.2 -60.1 173.0 -3.0 2.0 -4.8 18 23 A S - 0 0 64 13,-0.1 2,-1.1 26,-0.0 13,-0.2 -0.964 14.3-150.5-119.8 122.6 -0.6 4.6 -3.4 19 24 A K E -C 30 0B 132 11,-2.0 11,-1.9 -2,-0.5 2,-0.5 -0.756 19.2-172.7 -93.7 95.8 -1.4 6.8 -0.4 20 25 A T E -C 29 0B 98 -2,-1.1 9,-0.3 9,-0.3 2,-0.1 -0.778 14.8-138.1 -92.9 126.7 0.4 10.1 -0.8 21 26 A V E -C 28 0B 75 7,-3.5 7,-0.6 -2,-0.5 2,-0.2 -0.400 23.3-177.1 -79.8 158.5 0.3 12.5 2.1 22 27 A R + 0 0 188 5,-0.1 4,-0.1 -2,-0.1 -1,-0.1 -0.654 34.8 74.0-137.9-166.5 -0.2 16.2 1.7 23 28 A Y S S+ 0 0 192 -2,-0.2 3,-0.1 1,-0.1 -2,-0.0 0.631 78.3 44.7 63.1 133.4 -0.3 19.5 3.7 24 29 A G S S- 0 0 68 1,-0.1 -1,-0.1 3,-0.0 0, 0.0 -0.007 96.8 -81.1 88.5 163.0 2.9 21.0 5.0 25 30 A D S S+ 0 0 135 -3,-0.1 2,-0.6 1,-0.1 -1,-0.1 0.807 112.9 74.9 -71.2 -30.2 6.2 21.6 3.4 26 31 A S - 0 0 101 -3,-0.1 2,-0.2 -4,-0.1 -1,-0.1 -0.762 68.7-172.4 -89.5 119.4 7.2 18.0 4.1 27 32 A K - 0 0 139 -2,-0.6 2,-0.3 2,-0.0 -5,-0.1 -0.601 8.4-166.6-106.1 168.5 5.6 15.5 1.8 28 33 A N E -C 21 0B 102 -7,-0.6 -7,-3.5 -2,-0.2 2,-0.9 -0.876 12.9-152.8-160.1 122.8 5.5 11.7 1.8 29 34 A V E -C 20 0B 82 -2,-0.3 2,-0.7 -9,-0.3 -9,-0.3 -0.808 16.1-161.8-101.0 96.6 4.4 9.2 -0.9 30 35 A R E -C 19 0B 143 -11,-1.9 -11,-2.0 -2,-0.9 16,-0.2 -0.685 13.9-174.2 -81.8 112.7 3.3 6.0 0.9 31 36 A K E -B 45 0A 105 14,-1.7 14,-2.3 -2,-0.7 2,-0.4 -0.470 16.4-139.6 -99.9 173.7 3.2 3.1 -1.6 32 37 A F E -B 44 0A 16 -16,-0.4 2,-0.3 12,-0.3 -16,-0.1 -0.911 16.0-172.4-141.7 111.2 2.1 -0.5 -1.2 33 38 A I E -B 43 0A 52 10,-1.7 10,-1.7 -2,-0.4 2,-1.1 -0.764 31.3-114.2-103.6 148.9 3.9 -3.5 -2.6 34 39 A b E -B 42 0A 56 -2,-0.3 2,-0.6 8,-0.2 8,-0.3 -0.684 33.7-162.7 -83.8 98.3 2.7 -7.1 -2.7 35 40 A D E +B 41 0A 77 6,-2.2 6,-1.5 -2,-1.1 5,-0.4 -0.729 22.0 166.1 -86.6 120.7 5.1 -8.9 -0.4 36 41 A R + 0 0 180 -2,-0.6 -1,-0.1 4,-0.2 6,-0.1 0.027 57.8 86.0-120.1 24.3 5.0 -12.7 -0.9 37 42 A D S S+ 0 0 156 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.762 103.9 19.4 -93.5 -31.1 8.2 -13.5 1.0 38 43 A G S S- 0 0 70 3,-0.1 -2,-0.1 -3,-0.0 0, 0.0 0.853 141.1 -28.6-101.8 -69.1 6.7 -13.7 4.5 39 44 A E S S- 0 0 179 -4,-0.3 -3,-0.1 2,-0.1 -31,-0.0 0.715 85.7 -99.7-117.2 -57.7 2.9 -14.3 4.3 40 45 A G + 0 0 3 -5,-0.4 -31,-1.6 1,-0.2 -30,-1.2 0.600 69.0 120.6 129.6 60.5 1.5 -12.7 1.1 41 46 A V E -AB 8 35A 34 -6,-1.5 -6,-2.2 -33,-0.2 2,-0.7 -0.942 62.9-101.5-143.0 163.8 -0.0 -9.3 1.6 42 47 A c E +AB 7 34A 0 -35,-3.1 -36,-2.2 -2,-0.3 -35,-1.1 -0.792 46.1 174.5 -92.1 111.9 0.3 -5.7 0.3 43 48 A V E - B 0 33A 29 -10,-1.7 -10,-1.7 -2,-0.7 -38,-0.0 -0.756 38.4 -75.1-114.9 162.2 2.1 -3.6 2.9 44 49 A P E + B 0 32A 34 0, 0.0 -12,-0.3 0, 0.0 2,-0.2 -0.045 58.8 155.7 -51.0 154.6 3.4 0.1 2.9 45 50 A F E + B 0 31A 125 -14,-2.3 -14,-1.7 1,-0.1 0, 0.0 -0.850 20.4 88.1-160.1-165.9 6.5 0.9 1.0 46 51 A D 0 0 84 -2,-0.2 -15,-0.2 -16,-0.2 -1,-0.1 0.769 360.0 360.0 64.5 119.0 8.5 3.6 -0.8 47 52 A G 0 0 123 -17,-0.1 -1,-0.2 -19,-0.0 -19,-0.0 -0.960 360.0 360.0 158.6 360.0 10.9 5.7 1.3