==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-APR-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 09-JUL-10 2XKM . COMPND 2 MOLECULE: CAPSID PROTEIN G8P; . SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PHAGE PF1; . AUTHOR S.K.STRAUS,W.R.P SCOTT,C.D.SCHWIETERS,D.A.MARVIN . 46 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4394.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 40 87.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 38 82.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 149.5 15.5 -22.1 67.0 2 2 A V - 0 0 131 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.773 360.0-168.2 170.3 146.9 14.2 -23.0 63.4 3 3 A I - 0 0 148 -2,-0.2 2,-0.4 0, 0.0 0, 0.0 -0.693 27.2-123.2-132.4 175.5 11.6 -22.1 60.7 4 4 A D + 0 0 118 -2,-0.2 3,-0.4 1,-0.1 4,-0.2 -0.828 34.6 162.3-138.9 103.4 10.7 -24.2 57.6 5 5 A T > + 0 0 88 -2,-0.4 4,-0.6 1,-0.2 -1,-0.1 -0.294 60.3 100.5-106.3 40.9 10.9 -22.7 54.0 6 6 A S H > S+ 0 0 83 2,-0.2 4,-1.3 3,-0.1 -1,-0.2 0.788 78.3 49.3 -91.1 -40.2 10.9 -26.2 52.9 7 7 A A H > S+ 0 0 65 -3,-0.4 4,-2.2 1,-0.2 -2,-0.1 0.777 107.2 56.7 -69.4 -32.5 7.2 -26.1 52.0 8 8 A V H > S+ 0 0 66 2,-0.2 4,-3.1 -4,-0.2 5,-0.4 0.890 101.8 55.0 -69.5 -41.1 7.8 -22.9 50.1 9 9 A E H X S+ 0 0 140 -4,-0.6 4,-1.4 1,-0.2 -2,-0.2 0.930 111.1 44.6 -60.4 -42.2 10.4 -24.4 47.9 10 10 A S H X S+ 0 0 70 -4,-1.3 4,-1.1 2,-0.2 -1,-0.2 0.912 116.5 46.5 -67.9 -40.6 8.0 -27.2 46.9 11 11 A A H X S+ 0 0 53 -4,-2.2 4,-1.7 2,-0.2 3,-0.3 0.931 110.1 51.1 -67.6 -46.4 5.0 -24.7 46.4 12 12 A I H X S+ 0 0 102 -4,-3.1 4,-2.8 1,-0.3 -1,-0.2 0.875 104.5 58.8 -59.9 -35.3 7.0 -22.1 44.3 13 13 A T H X S+ 0 0 80 -4,-1.4 4,-2.2 -5,-0.4 -1,-0.3 0.929 103.1 53.0 -59.6 -41.8 8.2 -24.8 42.0 14 14 A D H X S+ 0 0 103 -4,-1.1 4,-2.0 -3,-0.3 5,-0.3 0.919 107.1 51.2 -59.1 -44.4 4.6 -25.5 41.3 15 15 A G H X S+ 0 0 31 -4,-1.7 4,-2.1 1,-0.3 -1,-0.2 0.947 110.0 49.7 -57.9 -45.5 3.9 -21.9 40.4 16 16 A Q H X S+ 0 0 88 -4,-2.8 4,-1.2 1,-0.2 -1,-0.3 0.861 108.3 55.1 -59.2 -39.2 6.8 -22.0 38.1 17 17 A G H X S+ 0 0 38 -4,-2.2 4,-0.7 2,-0.2 3,-0.3 0.936 109.2 43.2 -64.8 -48.3 5.5 -25.2 36.6 18 18 A D H X S+ 0 0 104 -4,-2.0 4,-3.2 2,-0.3 5,-0.3 0.798 107.8 60.2 -62.4 -36.0 1.9 -23.8 35.6 19 19 A M H X S+ 0 0 122 -4,-2.1 4,-3.1 -5,-0.3 -1,-0.2 0.901 101.7 54.8 -63.1 -34.3 3.4 -20.6 34.4 20 20 A K H X S+ 0 0 138 -4,-1.2 4,-2.4 -3,-0.3 -1,-0.3 0.877 110.3 44.4 -62.2 -38.3 5.2 -22.9 32.0 21 21 A A H X S+ 0 0 38 -4,-0.7 4,-3.0 2,-0.2 5,-0.3 0.891 115.0 47.6 -71.0 -44.5 1.8 -24.4 30.8 22 22 A I H X S+ 0 0 100 -4,-3.2 4,-2.5 1,-0.2 5,-0.2 0.945 116.1 45.7 -63.6 -45.5 0.2 -21.0 30.6 23 23 A G H X S+ 0 0 35 -4,-3.1 4,-2.0 -5,-0.3 -2,-0.2 0.902 117.2 43.0 -62.6 -45.2 3.2 -19.7 28.7 24 24 A G H X S+ 0 0 47 -4,-2.4 4,-1.2 -5,-0.2 -2,-0.2 0.950 117.1 44.7 -69.0 -47.0 3.4 -22.7 26.4 25 25 A Y H X S+ 0 0 192 -4,-3.0 4,-1.1 2,-0.2 3,-0.3 0.892 111.0 56.0 -63.3 -39.1 -0.3 -23.0 25.7 26 26 A I H >X S+ 0 0 91 -4,-2.5 4,-1.4 -5,-0.3 3,-0.8 0.957 106.4 50.7 -57.3 -48.0 -0.5 -19.1 25.2 27 27 A V H 3X S+ 0 0 85 -4,-2.0 4,-1.9 1,-0.2 -1,-0.3 0.804 98.1 66.8 -58.5 -32.3 2.2 -19.4 22.5 28 28 A G H 3X S+ 0 0 39 -4,-1.2 4,-0.6 -3,-0.3 -1,-0.2 0.908 103.2 46.4 -59.2 -40.2 0.2 -22.1 20.8 29 29 A A H XX S+ 0 0 49 -4,-1.1 4,-1.7 -3,-0.8 3,-0.8 0.861 105.6 57.2 -69.0 -39.6 -2.5 -19.6 20.0 30 30 A L H 3X S+ 0 0 109 -4,-1.4 4,-2.9 1,-0.3 5,-0.2 0.910 100.7 60.2 -62.1 -35.7 -0.2 -16.8 18.7 31 31 A V H 3X S+ 0 0 75 -4,-1.9 4,-2.9 1,-0.2 -1,-0.3 0.860 101.3 51.9 -58.1 -34.1 1.1 -19.3 16.2 32 32 A I H