==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 05-OCT-04 1XO3 . COMPND 2 MOLECULE: RIKEN CDNA 2900073H19; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR S.SINGH,M.TONELLI,R.C.TYLER,A.BAHRAMI,M.S.LEE,J.L.MARKLEY, . 101 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5871.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 64.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 12.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 12.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 12.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 11.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 158 0, 0.0 2,-0.4 0, 0.0 27,-0.1 0.000 360.0 360.0 360.0 113.3 14.0 -7.7 8.9 2 2 A A - 0 0 17 1,-0.2 4,-0.2 25,-0.1 29,-0.1 -0.912 360.0-143.4-105.3 135.1 15.4 -6.2 5.7 3 3 A A S S+ 0 0 103 -2,-0.4 -1,-0.2 26,-0.4 3,-0.1 0.952 99.5 27.3 -60.5 -52.3 19.2 -5.7 5.4 4 4 A P S S- 0 0 62 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 0.990 134.7 -37.3 -70.3 -74.0 18.8 -2.4 3.4 5 5 A L - 0 0 33 24,-0.1 24,-1.4 83,-0.1 2,-0.4 -0.985 53.5-150.2-153.9 150.3 15.5 -1.0 4.6 6 6 A C E -A 28 0A 11 -2,-0.3 83,-1.9 22,-0.2 84,-0.3 -0.971 9.3-161.1-131.4 145.3 12.1 -2.4 5.4 7 7 A V E -A 27 0A 2 20,-1.9 20,-2.0 -2,-0.4 2,-0.4 -0.787 11.0-134.9-123.0 163.2 8.6 -0.9 5.1 8 8 A K E -Ab 26 91A 42 82,-3.4 84,-3.7 -2,-0.3 2,-0.5 -0.976 9.1-162.7-121.7 131.2 5.2 -1.6 6.6 9 9 A V E +Ab 25 92A 3 16,-3.2 16,-3.7 -2,-0.4 2,-0.3 -0.954 23.9 164.1-109.7 129.0 1.9 -1.8 4.7 10 10 A E E - b 0 93A 35 82,-3.2 84,-2.8 -2,-0.5 2,-0.4 -0.946 32.0-127.1-144.2 161.3 -1.2 -1.5 6.8 11 11 A F E + b 0 94A 1 -2,-0.3 84,-0.2 82,-0.2 3,-0.1 -0.912 34.5 148.9-113.9 139.4 -5.0 -0.8 6.5 12 12 A G + 0 0 37 82,-3.0 2,-2.5 -2,-0.4 83,-0.2 0.612 55.0 77.2-135.7 -41.6 -6.8 1.8 8.6 13 13 A G S S- 0 0 10 81,-1.7 86,-0.2 1,-0.2 85,-0.2 -0.210 125.3 -79.6 -75.3 50.5 -9.8 3.3 6.7 14 14 A G S > S+ 0 0 18 -2,-2.5 3,-1.0 1,-0.1 4,-0.2 0.634 101.9 130.3 61.6 13.2 -11.9 0.2 7.4 15 15 A A G > + 0 0 2 79,-0.4 3,-2.2 1,-0.3 4,-0.4 0.815 54.1 70.9 -68.8 -29.8 -9.9 -1.2 4.5 16 16 A E G > >S+ 0 0 57 1,-0.3 5,-1.8 2,-0.2 3,-1.8 0.774 83.5 69.8 -58.3 -29.0 -9.0 -4.3 6.5 17 17 A L G X 5S+ 0 0 121 -3,-1.0 3,-0.6 1,-0.3 -1,-0.3 0.720 94.2 57.0 -64.8 -17.7 -12.6 -5.5 6.2 18 18 A L G < 5S+ 0 0 24 -3,-2.2 33,-2.6 -4,-0.2 34,-1.5 0.653 111.5 42.6 -81.1 -17.6 -11.9 -6.0 2.6 19 19 A F G X 5S- 0 0 0 -3,-1.8 3,-1.0 -4,-0.4 -1,-0.2 -0.009 125.9 -97.9-120.0 23.8 -9.1 -8.3 3.7 20 20 A D T < 5S- 0 0 131 -3,-0.6 -3,-0.2 1,-0.2 -4,-0.1 0.134 81.3 -54.1 82.3 -16.9 -11.0 -10.1 6.4 21 21 A G T 3 > - 0 0 31 -3,-0.2 4,-1.9 1,-0.1 3,-0.6 -0.187 61.3-105.2 -58.7 156.9 7.2 -0.1 -4.8 38 38 A I H 3> S+ 0 0 4 43,-0.5 4,-2.1 1,-0.3 44,-0.2 0.861 122.2 60.4 -53.0 -37.5 3.8 0.9 -3.5 39 39 A R H 3> S+ 0 0 111 43,-2.5 4,-1.3 42,-0.3 -1,-0.3 0.928 107.9 41.2 -52.7 -51.5 2.5 0.0 -7.0 40 40 A N H <> S+ 0 0 53 -3,-0.6 4,-2.2 42,-0.3 -1,-0.2 0.799 111.3 56.2 -75.0 -28.3 3.6 -3.6 -6.7 41 41 A L H X S+ 0 0 6 -4,-1.9 4,-2.5 2,-0.2 -1,-0.2 0.865 103.4 53.1 -74.8 -36.6 2.5 -4.0 -3.1 42 42 A L H X S+ 0 0 0 -4,-2.1 4,-3.8 -5,-0.2 -1,-0.2 0.904 110.2 50.0 -60.2 -39.9 -1.0 -2.9 -3.8 43 43 A V H X S+ 0 0 35 -4,-1.3 4,-2.9 2,-0.2 5,-0.5 0.926 108.8 50.9 -64.2 -45.3 -1.0 -5.6 -6.5 44 44 A W H X>S+ 0 0 134 -4,-2.2 4,-1.4 1,-0.2 5,-0.6 0.917 118.1 39.5 -55.7 -44.7 0.3 -8.2 -4.0 45 45 A I H X>S+ 0 0 0 -4,-2.5 5,-1.5 3,-0.2 4,-1.4 0.911 116.8 50.1 -72.8 -43.6 -2.5 -7.2 -1.7 46 46 A K H X5S+ 0 0 60 -4,-3.8 4,-0.7 3,-0.2 -2,-0.2 0.963 117.4 36.1 -61.4 -55.3 -5.2 -6.8 -4.4 47 47 A K H <5S+ 0 0 179 -4,-2.9 -1,-0.2 -5,-0.2 -2,-0.2 0.843 133.6 24.0 -72.5 -33.8 -4.7 -10.1 -6.1 48 48 A N H <5S+ 0 0 115 -4,-1.4 -3,-0.2 -5,-0.5 -2,-0.2 0.883 129.9 33.2 -98.5 -46.9 -3.9 -12.2 -3.0 49 49 A L H < - 0 0 173 1,-0.1 3,-1.8 -2,-0.0 4,-0.3 -0.861 37.3-129.9 -92.4 131.2 -14.2 -7.5 -5.0 54 54 A P G > S+ 0 0 53 0, 0.0 3,-0.7 0, 0.0 -1,-0.1 0.542 93.7 90.6 -61.0 -6.1 -11.6 -4.9 -5.9 55 55 A E G 3 S+ 0 0 142 1,-0.3 4,-0.0 4,-0.0 -3,-0.0 0.783 92.8 40.4 -61.0 -29.1 -14.3 -2.7 -7.4 56 56 A L G < S+ 0 0 62 -3,-1.8 -1,-0.3 2,-0.1 2,-0.1 0.517 114.0 69.9 -93.9 -7.9 -14.8 -1.1 -3.9 57 57 A F S < S- 0 0 2 -3,-0.7 9,-0.1 -4,-0.3 6,-0.1 -0.265 97.7 -63.6 -99.4-172.0 -11.0 -1.0 -3.4 58 58 A I - 0 0 2 1,-0.1 -1,-0.2 4,-0.1 2,-0.1 -0.252 54.9 -91.2 -79.5 160.5 -8.3 1.0 -5.1 59 59 A Q > - 0 0 85 1,-0.1 2,-2.5 -4,-0.0 3,-1.1 -0.399 48.9-100.3 -68.6 144.8 -7.2 1.1 -8.7 60 60 A G T 3 S+ 0 0 34 1,-0.2 -1,-0.1 -2,-0.1 -21,-0.1 -0.389 109.9 49.5 -75.4 71.7 -4.4 -1.3 -9.5 61 61 A D T 3 S- 0 0 61 -2,-2.5 -1,-0.2 -23,-0.1 -19,-0.2 0.181 129.8 -32.2-163.9 -38.1 -1.5 1.1 -9.5 62 62 A S S < S- 0 0 1 -3,-1.1 2,-0.3 -20,-0.1 -4,-0.1 0.178 103.9 -39.5-154.1 -79.4 -1.6 3.1 -6.3 63 63 A V - 0 0 13 -6,-0.1 5,-0.1 -5,-0.0 -1,-0.1 -0.968 48.5-112.4-155.9 161.8 -5.0 4.0 -4.9 64 64 A R - 0 0 70 -2,-0.3 3,-0.2 1,-0.1 -6,-0.1 -0.435 44.9 -98.4 -83.6 170.5 -8.5 5.0 -6.0 65 65 A P S S+ 0 0 128 0, 0.0 32,-0.1 0, 0.0 -1,-0.1 0.673 124.2 59.9 -61.6 -14.5 -9.9 8.5 -5.2 66 66 A G S S+ 0 0 4 1,-0.1 31,-2.8 -9,-0.1 2,-0.5 0.914 99.9 50.8 -82.1 -49.5 -11.6 6.7 -2.4 67 67 A I E S-C 96 0A 1 29,-0.3 29,-0.3 30,-0.2 2,-0.3 -0.830 70.5-157.3 -97.7 130.4 -8.7 5.3 -0.4 68 68 A L E -C 95 0A 64 27,-3.5 27,-4.0 -2,-0.5 2,-0.4 -0.728 7.7-147.2 -98.9 151.3 -5.8 7.6 0.6 69 69 A V E -C 94 0A 1 -2,-0.3 7,-2.0 25,-0.2 2,-0.7 -0.975 5.0-147.0-125.3 132.7 -2.3 6.3 1.4 70 70 A L E -CD 93 75A 52 23,-2.0 23,-1.5 -2,-0.4 2,-0.8 -0.869 12.1-149.4 -90.4 117.9 0.3 7.6 3.8 71 71 A I E > S- D 0 74A 0 3,-2.6 2,-3.1 -2,-0.7 3,-1.8 -0.864 82.9 -35.1 -86.0 109.8 3.8 7.0 2.5 72 72 A N T 3 S- 0 0 61 -2,-0.8 -1,-0.1 1,-0.3 -2,-0.1 -0.242 131.9 -37.7 67.1 -47.6 5.7 6.6 5.8 73 73 A D T 3 S+ 0 0 122 -2,-3.1 -1,-0.3 -4,-0.1 2,-0.2 0.190 122.1 86.0 175.5 24.1 3.2 9.2 7.3 74 74 A A E < S-D 71 0A 31 -3,-1.8 -3,-2.6 1,-0.0 2,-0.6 -0.781 88.9 -64.3-135.2 173.0 2.7 11.7 4.5 75 75 A D E > -D 70 0A 84 -2,-0.2 4,-1.2 -5,-0.2 3,-0.4 -0.451 40.5-155.7 -67.7 109.9 0.6 12.3 1.4 76 76 A W H >>>S+ 0 0 21 -7,-2.0 4,-2.4 -2,-0.6 5,-1.8 0.893 88.1 54.1 -49.1 -50.8 1.4 9.6 -1.1 77 77 A E H 345S+ 0 0 105 1,-0.3 -1,-0.2 2,-0.2 -2,-0.1 0.862 110.5 45.2 -60.8 -40.2 0.5 11.5 -4.2 78 78 A L H 345S+ 0 0 129 -3,-0.4 -1,-0.3 1,-0.2 -2,-0.2 0.714 116.7 47.7 -75.3 -20.8 2.7 14.5 -3.5 79 79 A L H <<5S- 0 0 64 -4,-1.2 -2,-0.2 -3,-0.8 -1,-0.2 0.758 127.4 -87.6 -95.0 -28.8 5.6 12.1 -2.6 80 80 A G T ><5 - 0 0 27 -4,-2.4 3,-1.4 -5,-0.2 -3,-0.2 0.175 55.0-174.0 139.0 -18.6 5.5 9.8 -5.5 81 81 A E T 3 - 0 0 41 -3,-0.1 3,-1.2 -81,-0.0 2,-0.2 -0.881 37.9 -82.5-123.3 163.1 12.0 4.7 2.1 88 88 A D T 3 S+ 0 0 106 -2,-0.3 -81,-0.1 1,-0.3 3,-0.1 -0.474 110.6 1.3 -73.8 133.9 13.2 3.2 5.3 89 89 A Q T 3 S+ 0 0 135 -83,-1.9 2,-0.5 1,-0.2 -1,-0.3 0.857 85.8 179.4 55.8 40.8 10.5 2.4 7.9 90 90 A D < - 0 0 2 -3,-1.2 -82,-3.4 -84,-0.3 2,-1.0 -0.592 21.2-151.2 -67.7 120.8 7.8 3.6 5.6 91 91 A S E -b 8 0A 31 -2,-0.5 2,-0.9 -84,-0.2 -82,-0.2 -0.840 14.8-168.3 -93.0 97.0 4.5 3.3 7.2 92 92 A I E -b 9 0A 2 -84,-3.7 -82,-3.2 -2,-1.0 2,-0.5 -0.795 10.0-176.7 -91.4 107.1 2.3 2.8 4.2 93 93 A L E -bC 10 70A 33 -23,-1.5 -23,-2.0 -2,-0.9 2,-0.7 -0.913 21.8-147.7-115.0 127.2 -1.3 3.1 5.3 94 94 A F E -bC 11 69A 0 -84,-2.8 -82,-3.0 -2,-0.5 -81,-1.7 -0.821 19.9-176.8 -89.7 115.5 -4.4 2.6 3.3 95 95 A I E - C 0 68A 56 -27,-4.0 -27,-3.5 -2,-0.7 2,-0.7 -0.918 16.1-149.9-118.0 104.3 -7.1 4.9 4.6 96 96 A S E > - C 0 67A 11 -2,-0.6 3,-0.6 -29,-0.3 -29,-0.3 -0.637 13.4-176.9 -75.0 115.0 -10.5 4.6 2.9 97 97 A T T 3 + 0 0 81 -31,-2.8 3,-0.3 -2,-0.7 -1,-0.2 0.359 64.9 94.3 -95.8 6.1 -12.1 8.0 3.1 98 98 A L T 3 S+ 0 0 103 -32,-0.3 2,-0.4 1,-0.3 -1,-0.2 0.770 99.3 29.4 -63.7 -26.0 -15.2 6.7 1.4 99 99 A H < + 0 0 100 -3,-0.6 -1,-0.3 -86,-0.2 -3,-0.1 -0.872 63.9 154.2-138.4 101.9 -16.4 6.2 5.0 100 100 A G 0 0 77 1,-0.4 -1,-0.1 -2,-0.4 -2,-0.1 0.783 360.0 360.0 -93.8 -33.5 -15.1 8.6 7.6 101 101 A G 0 0 146 0, 0.0 -1,-0.4 0, 0.0 0, 0.0 -0.973 360.0 360.0-160.0 360.0 -18.0 8.3 9.9