==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 06-OCT-04 1XOO . COMPND 2 MOLECULE: HEMAGGLUTININ; . SOURCE 2 SYNTHETIC: YES; . AUTHOR Y.LI,X.HAN,A.L.LAI,J.H.BUSHWELLER,D.S.CAFISO,L.K.TAMM . 20 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2032.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 15 75.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 30.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 40.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S > 0 0 127 0, 0.0 4,-2.2 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 165.8 -13.2 -1.5 -0.6 2 2 A L H > + 0 0 139 2,-0.2 4,-1.9 1,-0.2 5,-0.1 0.865 360.0 54.0 -58.6 -36.3 -11.0 -3.5 1.8 3 3 A F H > S+ 0 0 151 2,-0.2 4,-2.1 1,-0.2 5,-0.5 0.922 105.2 52.6 -63.5 -44.4 -8.7 -3.7 -1.2 4 4 A G H > S+ 0 0 34 1,-0.2 4,-1.9 2,-0.2 5,-0.3 0.904 106.5 52.4 -50.4 -48.2 -8.9 0.1 -1.4 5 5 A A H < S+ 0 0 72 -4,-2.2 4,-0.3 3,-0.2 -2,-0.2 0.834 117.8 40.4 -63.5 -33.6 -7.9 0.2 2.3 6 6 A I H >X S+ 0 0 85 -4,-1.9 3,-1.9 2,-0.1 4,-1.5 0.967 125.2 29.7 -64.0 -92.7 -4.9 -2.0 1.3 7 7 A A H 3X S+ 0 0 23 -4,-2.1 4,-3.1 1,-0.3 -3,-0.2 0.833 115.3 60.5 -46.4 -42.8 -3.6 -0.6 -2.0 8 8 A G H 3< S+ 0 0 41 -4,-1.9 -1,-0.3 -5,-0.5 -3,-0.2 0.732 106.3 48.0 -66.1 -23.0 -4.8 3.0 -1.3 9 9 A F H X> S+ 0 0 128 -3,-1.9 4,-3.0 -5,-0.3 3,-1.5 0.909 112.5 48.8 -73.0 -46.7 -2.4 3.1 1.8 10 10 A I H 3X S+ 0 0 59 -4,-1.5 4,-2.7 1,-0.3 5,-0.4 0.918 93.9 75.5 -57.8 -43.8 0.4 1.7 -0.4 11 11 A E H 3< S+ 0 0 141 -4,-3.1 -1,-0.3 1,-0.2 -2,-0.1 0.492 121.7 9.0 -57.2 -2.8 -0.3 4.3 -3.1 12 12 A N H X4 S+ 0 0 145 -3,-1.5 3,-0.7 0, 0.0 4,-0.2 0.403 136.0 43.7-126.1 -54.7 1.4 6.8 -0.6 13 13 A G H >< S+ 0 0 28 -4,-3.0 3,-0.6 1,-0.2 -3,-0.2 0.535 92.5 83.7 -78.9 -8.2 3.0 4.7 2.2 14 14 A W G >< S+ 0 0 146 -4,-2.7 3,-2.5 -5,-0.3 4,-0.2 0.892 81.3 60.4 -56.0 -47.5 4.5 2.0 -0.0 15 15 A E G < S+ 0 0 157 -3,-0.7 3,-0.4 -5,-0.4 -1,-0.2 0.718 101.4 51.9 -72.3 -18.9 7.7 3.8 -1.0 16 16 A G G < S+ 0 0 67 -3,-0.6 -1,-0.3 -4,-0.2 -2,-0.2 0.454 116.5 43.1 -82.6 -3.9 8.9 4.1 2.6 17 17 A M S X S+ 0 0 126 -3,-2.5 3,-1.0 -4,-0.2 -2,-0.2 0.156 75.4 110.1-129.0 9.3 8.4 0.3 3.0 18 18 A I T 3 S+ 0 0 96 -3,-0.4 2,-0.7 1,-0.3 -2,-0.1 0.903 72.2 64.8 -55.3 -45.6 9.8 -1.1 -0.3 19 19 A D T 3 0 0 159 1,-0.2 -1,-0.3 -4,-0.2 -4,-0.0 0.102 360.0 360.0 -66.7 19.1 12.8 -2.6 1.6 20 20 A G < 0 0 108 -3,-1.0 -1,-0.2 -2,-0.7 -2,-0.1 0.360 360.0 360.0 -84.0 360.0 10.4 -5.0 3.4