==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 06-OCT-04 1XOP . COMPND 2 MOLECULE: HEMAGGLUTININ; . SOURCE 2 SYNTHETIC: YES; . AUTHOR Y.LI,X.HAN,A.L.LAI,J.H.BUSHWELLER,D.S.CAFISO,L.K.TAMM . 20 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2138.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 12 60.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 35.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 188 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -95.7 14.9 1.2 0.2 2 2 A L - 0 0 147 1,-0.1 4,-0.1 0, 0.0 3,-0.0 -0.494 360.0-139.5 -67.3 165.8 13.1 2.7 -2.6 3 3 A F S >> S+ 0 0 148 -2,-0.2 3,-0.9 2,-0.1 4,-0.7 0.543 77.5 96.3-106.2 -10.7 9.9 4.1 -1.0 4 4 A G H >> S+ 0 0 60 1,-0.3 4,-3.0 2,-0.2 3,-0.9 0.863 91.5 39.4 -52.9 -48.0 7.4 3.2 -3.8 5 5 A A H 3> S+ 0 0 68 2,-0.3 4,-2.9 1,-0.2 5,-0.3 0.685 101.0 72.9 -75.7 -19.9 6.2 -0.0 -2.1 6 6 A I H <4 S+ 0 0 92 -3,-0.9 -1,-0.2 2,-0.2 -2,-0.2 0.600 117.6 23.8 -74.7 -8.6 6.3 1.6 1.4 7 7 A A H XX S+ 0 0 44 -3,-0.9 4,-2.0 -4,-0.7 3,-1.1 0.622 119.6 61.7-108.1 -44.3 3.2 3.4 0.1 8 8 A G H 3X S+ 0 0 23 -4,-3.0 4,-2.9 1,-0.3 5,-0.2 0.840 103.7 49.2 -57.0 -39.2 2.2 0.7 -2.6 9 9 A F H 3< S+ 0 0 165 -4,-2.9 -1,-0.3 2,-0.2 4,-0.1 0.770 111.2 50.7 -69.6 -26.6 1.8 -2.0 0.1 10 10 A I H <> S+ 0 0 102 -3,-1.1 4,-2.8 -5,-0.3 -2,-0.2 0.858 113.5 45.0 -75.8 -35.5 -0.4 0.4 2.1 11 11 A E H X S+ 0 0 100 -4,-2.0 4,-3.0 2,-0.3 -2,-0.2 0.949 114.9 45.3 -78.8 -49.2 -2.6 1.2 -1.0 12 12 A N H < S+ 0 0 131 -4,-2.9 -1,-0.2 1,-0.2 -2,-0.2 0.637 114.3 55.4 -63.7 -14.7 -2.8 -2.5 -2.0 13 13 A G H >4 S+ 0 0 30 -5,-0.2 3,-0.9 -4,-0.1 4,-0.3 0.938 114.4 34.9 -76.6 -55.5 -3.6 -2.9 1.7 14 14 A W H >< S+ 0 0 147 -4,-2.8 3,-2.3 1,-0.3 -2,-0.2 0.979 122.5 45.2 -62.5 -58.8 -6.5 -0.4 1.8 15 15 A E T 3< S+ 0 0 128 -4,-3.0 -1,-0.3 1,-0.3 -3,-0.1 0.156 100.2 73.3 -80.4 23.6 -7.8 -1.3 -1.7 16 16 A G T < S+ 0 0 59 -3,-0.9 -1,-0.3 -5,-0.1 -2,-0.2 0.561 116.8 12.7 -94.5 -19.8 -7.3 -4.9 -0.7 17 17 A M S < S+ 0 0 145 -3,-2.3 -2,-0.2 -4,-0.3 -1,-0.1 -0.260 73.6 122.7-162.8 60.6 -10.4 -4.6 1.5 18 18 A I S S+ 0 0 95 2,-0.1 -3,-0.1 -3,-0.0 -2,-0.0 0.926 84.5 53.8 -70.9 -67.8 -12.6 -1.5 1.1 19 19 A D 0 0 158 1,-0.2 0, 0.0 -4,-0.0 0, 0.0 -0.365 360.0 360.0 -61.4 143.6 -15.5 -4.0 0.4 20 20 A G 0 0 108 -3,-0.0 -1,-0.2 -2,-0.0 -2,-0.1 0.153 360.0 360.0 72.3 360.0 -15.8 -6.5 3.3