==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-SEP-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER UNKNOWN FUNCTION 15-SEP-10 2XRH . COMPND 2 MOLECULE: PROTEIN HP0721; . SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; . AUTHOR G.CIOCI,L.TERRADOT,C.DIAN,C.MULLER-DIECKMANN,G.LEONARD . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7117.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 66.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 13.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 50 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 13 A A 0 0 147 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 32.9 -7.4 35.0 10.4 2 14 A I + 0 0 175 2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.606 360.0 107.8 -83.6 -14.5 -5.5 38.0 9.0 3 15 A D - 0 0 113 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.514 69.7-145.1 -57.5 122.1 -2.6 36.8 11.2 4 16 A P + 0 0 116 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.663 63.3 114.2 -71.0 -13.6 -0.0 35.4 8.7 5 17 A F + 0 0 146 2,-0.0 2,-0.3 1,-0.0 -2,-0.0 -0.257 39.7 166.0 -52.5 134.5 1.1 32.6 11.1 6 18 A T + 0 0 68 1,-0.1 -1,-0.0 2,-0.0 0, 0.0 -0.961 30.4 168.5-152.1 144.1 0.2 29.1 10.1 7 19 A M + 0 0 164 -2,-0.3 2,-0.4 2,-0.0 -1,-0.1 -0.184 35.6 150.4-131.2 38.5 1.2 25.5 11.1 8 20 A A - 0 0 52 1,-0.1 2,-1.4 2,-0.0 5,-0.1 -0.566 41.0-148.9 -77.7 126.2 -1.5 23.7 9.1 9 21 A K + 0 0 167 -2,-0.4 2,-0.3 2,-0.0 -1,-0.1 -0.692 66.8 83.4 -90.4 82.4 -0.7 20.2 7.9 10 22 A D S S- 0 0 71 -2,-1.4 3,-0.2 23,-0.0 24,-0.0 -0.905 87.5-101.9-160.5-171.3 -2.9 20.4 4.8 11 23 A F S > S+ 0 0 27 -2,-0.3 3,-0.9 1,-0.1 8,-0.1 0.182 83.9 106.3-109.0 12.2 -3.1 21.6 1.2 12 24 A S T 3 S+ 0 0 53 1,-0.2 -1,-0.1 0, 0.0 -3,-0.0 0.767 86.1 40.7 -67.5 -23.5 -5.1 24.7 1.9 13 25 A K T 3 S+ 0 0 150 -3,-0.2 2,-0.3 -5,-0.1 -1,-0.2 0.422 91.7 107.7-101.3 -0.4 -2.1 27.0 1.3 14 26 A T S < S- 0 0 35 -3,-0.9 -3,-0.0 1,-0.1 5,-0.0 -0.615 73.0-115.8 -81.8 138.5 -0.7 25.1 -1.7 15 27 A S > - 0 0 52 -2,-0.3 4,-2.3 1,-0.1 5,-0.2 -0.254 22.6-113.9 -66.9 154.7 -1.0 26.8 -5.1 16 28 A D H > S+ 0 0 67 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.896 119.0 55.6 -52.3 -42.6 -3.1 25.1 -7.9 17 29 A E H > S+ 0 0 116 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.938 108.6 44.5 -54.3 -54.4 0.2 24.6 -9.7 18 30 A D H > S+ 0 0 79 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.820 110.4 54.7 -66.8 -33.1 1.8 22.8 -6.9 19 31 A L H < S+ 0 0 0 -4,-2.3 3,-0.4 2,-0.2 4,-0.2 0.915 110.7 46.7 -64.4 -43.0 -1.3 20.7 -6.3 20 32 A A H >< S+ 0 0 4 -4,-2.5 3,-1.9 1,-0.2 -2,-0.2 0.935 107.9 56.4 -60.9 -43.5 -1.2 19.6 -10.0 21 33 A K H 3< S+ 0 0 84 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.712 103.3 54.4 -64.7 -21.8 2.6 18.9 -9.9 22 34 A M T >X S+ 0 0 45 -4,-1.0 3,-2.3 -3,-0.4 4,-1.0 0.420 76.9 132.4 -92.5 1.0 2.1 16.4 -7.0 23 35 A A T <4 S+ 0 0 0 -3,-1.9 41,-0.2 1,-0.3 -3,-0.1 -0.280 76.9 13.2 -57.2 130.9 -0.5 14.3 -8.9 24 36 A G T 34 S+ 0 0 7 39,-0.1 -1,-0.3 40,-0.1 -2,-0.1 0.282 120.7 68.3 87.4 -10.3 0.4 10.6 -8.6 25 37 A V T <4 + 0 0 81 -3,-2.3 -2,-0.2 2,-0.1 -3,-0.1 0.498 63.4 116.1-116.2 -8.6 3.0 11.1 -5.8 26 38 A V S < S- 0 0 9 -4,-1.0 5,-0.1 1,-0.1 -2,-0.0 -0.378 74.5-108.4 -64.8 138.8 0.8 12.2 -2.9 27 39 A A >> - 0 0 33 1,-0.1 3,-2.1 3,-0.1 4,-0.6 -0.371 20.7-120.3 -68.3 144.1 1.0 9.5 -0.1 28 40 A P G >4 S+ 0 0 36 0, 0.0 3,-1.3 0, 0.0 4,-0.5 0.860 113.9 62.2 -51.5 -37.2 -2.1 7.4 0.4 29 41 A Q G 34 S+ 0 0 162 1,-0.3 4,-0.2 2,-0.1 3,-0.1 0.687 111.6 38.8 -63.2 -18.2 -2.4 8.7 4.0 30 42 A D G <> S+ 0 0 37 -3,-2.1 4,-2.4 2,-0.1 -1,-0.3 0.390 89.6 97.4-109.2 4.2 -2.8 12.2 2.5 31 43 A I H S+ 0 0 24 -4,-0.5 4,-2.8 2,-0.2 -1,-0.2 0.948 113.7 45.1 -64.8 -46.0 -8.4 12.0 1.0 33 45 A D H > S+ 0 0 79 1,-0.2 4,-2.2 2,-0.2 -2,-0.2 0.910 113.9 50.3 -63.0 -40.1 -7.3 15.5 2.0 34 46 A Y H X S+ 0 0 4 -4,-2.4 4,-2.6 2,-0.2 -2,-0.2 0.937 111.9 46.7 -62.0 -47.4 -5.7 16.0 -1.4 35 47 A T H X S+ 0 0 28 -4,-2.6 4,-2.6 1,-0.2 5,-0.2 0.918 111.3 51.5 -64.5 -43.3 -8.8 15.0 -3.2 36 48 A K H X S+ 0 0 108 -4,-2.8 4,-2.6 2,-0.2 -1,-0.2 0.902 111.0 49.0 -57.9 -42.5 -11.0 17.2 -1.0 37 49 A E H X S+ 0 0 26 -4,-2.2 4,-2.4 2,-0.2 -2,-0.2 0.933 111.1 48.7 -65.1 -43.1 -8.7 20.1 -1.8 38 50 A L H X S+ 0 0 14 -4,-2.6 4,-2.7 2,-0.2 -2,-0.2 0.924 113.0 47.8 -62.2 -42.8 -8.8 19.5 -5.6 39 51 A K H X S+ 0 0 84 -4,-2.6 4,-2.4 1,-0.2 -1,-0.2 0.905 110.2 53.1 -66.6 -43.0 -12.6 19.2 -5.5 40 52 A K H X S+ 0 0 108 -4,-2.6 4,-0.5 -5,-0.2 -1,-0.2 0.925 113.4 42.7 -53.9 -49.2 -12.8 22.4 -3.4 41 53 A R H >X S+ 0 0 32 -4,-2.4 3,-1.2 1,-0.2 4,-0.7 0.930 114.9 49.4 -66.9 -43.9 -10.6 24.3 -6.0 42 54 A M H >< S+ 0 0 26 -4,-2.7 3,-0.7 1,-0.3 -1,-0.2 0.832 100.7 62.9 -68.1 -35.8 -12.4 22.8 -9.0 43 55 A E H 3< S+ 0 0 169 -4,-2.4 -1,-0.3 1,-0.2 -2,-0.2 0.704 106.9 47.2 -57.5 -23.9 -15.9 23.6 -7.7 44 56 A K H << S+ 0 0 161 -3,-1.2 -1,-0.2 -4,-0.5 -2,-0.2 0.670 95.5 95.3 -92.2 -20.2 -14.9 27.3 -7.9 45 57 A M S << S- 0 0 34 -4,-0.7 2,-0.0 -3,-0.7 -3,-0.0 -0.417 79.3-112.8 -82.0 143.1 -13.4 27.3 -11.4 46 58 A P > - 0 0 77 0, 0.0 4,-2.8 0, 0.0 3,-0.2 -0.375 40.6-108.8 -59.8 150.8 -15.1 28.1 -14.7 47 59 A E H > S+ 0 0 88 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.857 117.2 56.1 -59.7 -36.7 -15.4 25.0 -16.7 48 60 A D H > S+ 0 0 103 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.950 113.4 41.4 -58.4 -45.5 -12.7 26.1 -19.3 49 61 A K H > S+ 0 0 110 2,-0.2 4,-2.6 -3,-0.2 -2,-0.2 0.896 113.0 54.5 -67.4 -41.6 -10.2 26.5 -16.4 50 62 A R H X S+ 0 0 54 -4,-2.8 4,-2.7 1,-0.2 -2,-0.2 0.919 108.8 48.1 -60.2 -42.4 -11.4 23.3 -14.7 51 63 A K H X S+ 0 0 124 -4,-2.7 4,-2.3 1,-0.2 -1,-0.2 0.895 112.2 49.7 -66.2 -41.1 -10.8 21.3 -17.9 52 64 A A H X S+ 0 0 45 -4,-1.9 4,-1.9 -5,-0.2 -1,-0.2 0.905 112.4 47.6 -59.5 -43.3 -7.3 22.8 -18.2 53 65 A F H X S+ 0 0 18 -4,-2.6 4,-2.6 2,-0.2 -2,-0.2 0.917 110.0 51.7 -67.9 -44.2 -6.5 22.0 -14.6 54 66 A H H X S+ 0 0 58 -4,-2.7 4,-2.4 1,-0.2 -1,-0.2 0.906 107.9 53.3 -60.3 -40.7 -7.8 18.4 -15.0 55 67 A K H X S+ 0 0 126 -4,-2.3 4,-2.8 2,-0.2 -1,-0.2 0.909 108.7 49.4 -60.3 -43.1 -5.6 18.0 -18.0 56 68 A Q H X S+ 0 0 67 -4,-1.9 4,-3.0 2,-0.2 5,-0.3 0.913 108.3 53.1 -62.1 -39.8 -2.6 19.1 -16.0 57 69 A L H X S+ 0 0 2 -4,-2.6 4,-2.6 1,-0.2 -2,-0.2 0.939 112.3 45.3 -62.3 -44.4 -3.5 16.7 -13.2 58 70 A H H X S+ 0 0 48 -4,-2.4 4,-2.4 2,-0.2 -1,-0.2 0.923 113.4 49.6 -63.8 -45.5 -3.5 13.9 -15.7 59 71 A E H X S+ 0 0 74 -4,-2.8 4,-2.5 1,-0.2 -2,-0.2 0.921 114.8 43.6 -61.3 -45.4 -0.3 15.0 -17.4 60 72 A Y H X S+ 0 0 54 -4,-3.0 4,-2.7 2,-0.2 -1,-0.2 0.905 111.5 52.6 -68.7 -41.2 1.6 15.3 -14.1 61 73 A A H X S+ 0 0 2 -4,-2.6 4,-1.0 -5,-0.3 38,-0.2 0.922 112.3 48.7 -58.6 -41.6 0.2 12.0 -12.8 62 74 A T H >X S+ 0 0 38 -4,-2.4 4,-2.1 36,-0.2 3,-0.9 0.970 114.4 43.0 -62.5 -52.1 1.4 10.4 -16.0 63 75 A K H 3< S+ 0 0 111 -4,-2.5 4,-0.4 1,-0.3 -1,-0.2 0.863 114.0 52.1 -59.9 -39.1 4.9 11.9 -15.8 64 76 A N H 3< S+ 0 0 58 -4,-2.7 -1,-0.3 -41,-0.2 -2,-0.2 0.647 121.1 30.3 -77.2 -16.2 5.2 11.2 -12.1 65 77 A T H X< S+ 0 0 6 -4,-1.0 3,-1.5 -3,-0.9 -2,-0.2 0.536 89.0 95.7-119.6 -10.5 4.3 7.5 -12.4 66 78 A D T 3< S+ 0 0 72 -4,-2.1 -2,-0.1 1,-0.3 -3,-0.1 0.783 92.1 41.6 -50.7 -39.9 5.6 6.5 -15.9 67 79 A K T 3 S+ 0 0 180 -4,-0.4 -1,-0.3 2,-0.1 -2,-0.1 0.428 91.4 105.4 -94.1 -2.5 8.9 5.1 -14.6 68 80 A M S < S- 0 0 69 -3,-1.5 2,-0.2 1,-0.1 -3,-0.1 -0.408 79.2-107.0 -68.8 155.8 7.5 3.4 -11.5 69 81 A T > - 0 0 77 1,-0.1 4,-2.6 -2,-0.1 5,-0.2 -0.505 23.8-118.5 -74.3 152.8 7.3 -0.4 -11.7 70 82 A V H > S+ 0 0 118 1,-0.2 4,-3.1 2,-0.2 5,-0.3 0.905 114.7 56.9 -56.4 -40.7 3.8 -1.8 -12.0 71 83 A A H > S+ 0 0 70 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.939 111.1 40.6 -58.6 -47.6 4.3 -3.5 -8.7 72 84 A D H > S+ 0 0 101 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.888 116.4 50.5 -70.0 -39.1 5.0 -0.3 -6.9 73 85 A F H X S+ 0 0 23 -4,-2.6 4,-2.8 2,-0.2 -2,-0.2 0.937 111.0 47.8 -65.8 -44.2 2.2 1.6 -8.8 74 86 A E H X S+ 0 0 97 -4,-3.1 4,-2.9 2,-0.2 5,-0.3 0.903 108.6 54.9 -62.8 -40.5 -0.4 -1.0 -8.1 75 87 A A H X S+ 0 0 63 -4,-2.0 4,-1.7 -5,-0.3 -1,-0.2 0.933 112.5 43.9 -59.1 -45.9 0.5 -1.1 -4.4 76 88 A R H X S+ 0 0 36 -4,-2.0 4,-2.6 2,-0.2 -2,-0.2 0.928 113.1 50.2 -63.1 -44.9 -0.0 2.7 -4.2 77 89 A Q H X S+ 0 0 14 -4,-2.8 4,-2.6 1,-0.2 -2,-0.2 0.876 109.7 50.9 -66.4 -37.2 -3.3 2.6 -6.2 78 90 A K H X S+ 0 0 119 -4,-2.9 4,-2.3 2,-0.2 -1,-0.2 0.919 112.3 46.9 -63.4 -42.2 -4.7 -0.2 -4.1 79 91 A A H X S+ 0 0 42 -4,-1.7 4,-2.7 -5,-0.3 -2,-0.2 0.879 111.6 51.3 -67.3 -38.7 -3.9 1.8 -1.0 80 92 A V H X S+ 0 0 6 -4,-2.6 4,-2.8 2,-0.2 5,-0.2 0.940 108.9 50.9 -62.2 -47.4 -5.4 5.0 -2.5 81 93 A K H X S+ 0 0 79 -4,-2.6 4,-2.1 1,-0.2 -2,-0.2 0.932 113.1 45.8 -58.2 -46.4 -8.6 3.1 -3.4 82 94 A E H X S+ 0 0 92 -4,-2.3 4,-2.4 2,-0.2 -1,-0.2 0.902 111.8 50.5 -64.5 -42.8 -8.9 1.9 0.2 83 95 A A H X S+ 0 0 25 -4,-2.7 4,-1.6 1,-0.2 -1,-0.2 0.903 110.5 49.7 -60.4 -44.6 -8.1 5.3 1.7 84 96 A L H <>S+ 0 0 13 -4,-2.8 5,-2.9 2,-0.2 -1,-0.2 0.905 109.7 52.1 -62.2 -41.8 -10.7 6.9 -0.5 85 97 A K H ><5S+ 0 0 63 -4,-2.1 3,-2.0 1,-0.2 -2,-0.2 0.938 110.6 48.2 -56.2 -48.8 -13.3 4.2 0.6 86 98 A K H 3<5S+ 0 0 156 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.760 108.0 53.4 -68.0 -27.5 -12.6 4.9 4.2 87 99 A G T 3<5S- 0 0 26 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.239 115.9-117.9 -86.8 10.5 -12.9 8.6 3.8 88 100 A N T < 5 + 0 0 151 -3,-2.0 -3,-0.2 1,-0.2 -2,-0.1 0.730 61.5 156.4 54.4 32.6 -16.3 8.0 2.2 89 101 A M < - 0 0 36 -5,-2.9 2,-0.8 -6,-0.2 -1,-0.2 -0.415 54.4 -88.9 -89.8 167.1 -15.1 9.4 -1.1 90 102 A E - 0 0 130 1,-0.1 -5,-0.1 -2,-0.1 -1,-0.1 0.034 57.8-104.2 -66.6 18.7 -16.5 8.8 -4.7 91 103 A D - 0 0 108 -2,-0.8 2,-0.2 -10,-0.1 -1,-0.1 0.616 41.3 -90.1 56.4 134.2 -14.5 5.7 -6.1 92 104 A M - 0 0 39 1,-0.1 3,-0.1 -3,-0.1 6,-0.0 -0.506 27.6-141.7 -61.4 139.3 -11.9 6.3 -8.7 93 105 A D S S+ 0 0 142 1,-0.2 2,-0.4 -2,-0.2 -1,-0.1 0.888 90.4 28.0 -67.4 -40.0 -13.4 6.1 -12.2 94 106 A D S > S- 0 0 62 6,-0.1 3,-1.5 1,-0.1 -1,-0.2 -0.963 73.4-137.7-126.5 138.1 -10.2 4.4 -13.4 95 107 A D T 3 S+ 0 0 114 -2,-0.4 3,-0.1 1,-0.3 -14,-0.1 0.827 105.2 65.4 -64.3 -33.8 -7.9 2.2 -11.3 96 108 A F T > S- 0 0 131 1,-0.2 3,-1.6 2,-0.1 -1,-0.3 0.338 99.3-156.6 -63.2 3.2 -4.8 3.8 -13.0 97 109 A G G X - 0 0 6 -3,-1.5 3,-1.0 1,-0.3 -1,-0.2 -0.205 58.0 -2.6 58.2-131.2 -6.1 6.9 -11.1 98 110 A L G 3 S+ 0 0 50 1,-0.2 -1,-0.3 -3,-0.1 -36,-0.2 0.610 117.1 78.7 -75.1 -11.8 -5.3 10.3 -12.3 99 111 A R G < 0 0 64 -3,-1.6 -1,-0.2 -38,-0.2 -37,-0.2 0.910 360.0 360.0 -57.2 -36.2 -3.0 9.1 -15.1 100 112 A S < 0 0 78 -3,-1.0 -6,-0.1 -4,-0.1 -1,-0.1 -0.696 360.0 360.0-105.9 360.0 -6.1 8.4 -17.1