==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 13-NOV-04 1Y00 . COMPND 2 MOLECULE: CARBON STORAGE REGULATOR; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR P.GUTIERREZ,Y.LI,M.J.OSBORNE,Q.LIU,K.GEHRING,MONTREAL- . 122 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8300.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 76 62.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 32 26.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 28 23.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 6.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 170 0, 0.0 2,-0.5 0, 0.0 96,-0.2 0.000 360.0 360.0 360.0 105.4 -2.6 -11.0 -4.3 2 2 A L E -A 96 0A 14 94,-1.3 94,-3.2 2,-0.1 2,-0.7 -0.944 360.0-169.1-120.0 113.2 0.7 -10.4 -2.6 3 3 A I E +A 95 0A 71 -2,-0.5 2,-0.5 92,-0.2 92,-0.2 -0.870 15.3 167.0-105.0 107.9 1.1 -11.2 1.1 4 4 A L E -A 94 0A 21 90,-2.3 90,-1.4 -2,-0.7 -2,-0.1 -0.978 35.5-119.4-124.1 126.0 4.3 -9.9 2.6 5 5 A T E +A 93 0A 50 -2,-0.5 2,-0.3 88,-0.3 88,-0.3 -0.270 39.1 175.6 -59.8 145.2 5.1 -9.7 6.3 6 6 A R E +A 92 0A 47 86,-2.9 86,-0.8 2,-0.0 17,-0.0 -0.990 24.2 142.2-155.9 146.3 5.8 -6.2 7.6 7 7 A R S S+ 0 0 80 -2,-0.3 17,-0.3 84,-0.1 16,-0.1 -0.156 70.2 41.3 175.9 74.3 6.5 -4.4 10.8 8 8 A V S S- 0 0 97 15,-2.2 15,-0.1 14,-0.3 16,-0.1 -0.101 118.6 -33.1 177.0 -60.8 9.1 -1.5 10.7 9 9 A G - 0 0 39 13,-0.1 14,-0.1 15,-0.0 15,-0.1 -0.160 59.2-179.2 173.7 82.4 8.8 0.6 7.6 10 10 A E - 0 0 11 97,-0.0 11,-0.1 2,-0.0 13,-0.1 0.187 8.6-160.4 -72.2-161.9 7.7 -0.6 4.2 11 11 A T + 0 0 82 9,-0.1 2,-0.3 10,-0.1 10,-0.2 -0.229 13.9 169.7 172.3 89.4 7.4 1.5 1.1 12 12 A L B -D 20 0B 3 8,-1.6 8,-2.1 94,-0.1 2,-0.4 -0.805 17.3-155.7-110.5 152.3 5.3 0.5 -2.0 13 13 A M E +G 105 0C 53 92,-2.4 92,-2.9 -2,-0.3 2,-0.5 -0.851 17.0 170.6-133.0 100.3 4.5 2.7 -5.0 14 14 A I E +G 104 0C 1 -2,-0.4 2,-0.5 90,-0.3 90,-0.3 -0.925 58.9 19.0-111.3 127.1 1.4 1.8 -7.0 15 15 A G E S-G 103 0C 0 88,-1.7 88,-0.8 -2,-0.5 -2,-0.1 -0.890 115.0 -55.8 126.5-102.7 0.1 4.2 -9.7 16 16 A D S S+ 0 0 88 -2,-0.5 -1,-0.1 86,-0.1 88,-0.1 0.231 121.7 6.4-165.8 17.4 2.6 6.8 -11.0 17 17 A E S S+ 0 0 107 86,-0.2 2,-0.1 -3,-0.1 23,-0.1 0.212 90.3 117.6 158.9 59.4 3.9 8.8 -8.0 18 18 A V - 0 0 8 18,-0.1 18,-0.2 58,-0.0 2,-0.1 -0.333 37.5-159.6-120.5-157.4 2.8 7.5 -4.6 19 19 A T E - E 0 35B 68 16,-1.4 16,-1.6 -5,-0.1 2,-0.5 -0.357 6.6-177.3 167.6 105.5 4.3 6.0 -1.4 20 20 A V E -DE 12 34B 5 -8,-2.1 -8,-1.6 14,-0.2 2,-0.6 -0.945 5.0-168.8-122.9 114.3 2.5 4.0 1.2 21 21 A T E - E 0 33B 55 12,-1.2 12,-1.8 -2,-0.5 2,-1.3 -0.887 10.8-157.2-104.4 118.4 4.4 2.8 4.3 22 22 A V - 0 0 2 -2,-0.6 -14,-0.3 1,-0.2 -13,-0.1 -0.480 11.5-167.2 -91.8 63.9 2.6 0.2 6.5 23 23 A L - 0 0 50 -2,-1.3 -15,-2.2 1,-0.2 2,-0.6 0.676 7.8-177.8 -13.2 -70.6 4.5 1.0 9.7 24 24 A G + 0 0 1 -17,-0.3 2,-0.3 1,-0.2 -1,-0.2 -0.210 49.2 94.2 90.7 -45.4 3.3 -2.1 11.5 25 25 A V + 0 0 60 -2,-0.6 6,-0.3 6,-0.1 2,-0.3 -0.648 50.4 114.6 -85.3 137.4 5.0 -1.4 14.8 26 26 A K - 0 0 101 -2,-0.3 4,-0.1 1,-0.3 0, 0.0 -0.933 65.5 -87.7 174.7 165.5 2.9 0.4 17.5 27 27 A G S S- 0 0 73 -2,-0.3 -1,-0.3 2,-0.3 3,-0.1 0.884 96.0 -35.9 -54.4-105.9 1.4 0.1 20.9 28 28 A N S S+ 0 0 138 1,-0.2 2,-0.4 2,-0.0 -1,-0.1 0.852 135.6 46.2 -90.3 -41.5 -2.1 -1.4 20.8 29 29 A Q S S- 0 0 109 -4,-0.0 2,-0.7 38,-0.0 -2,-0.3 -0.857 82.3-132.2-105.6 136.5 -3.2 0.2 17.5 30 30 A V E - F 0 68B 6 38,-0.8 38,-2.9 -2,-0.4 2,-1.1 -0.792 13.8-141.6 -93.2 114.1 -0.9 0.3 14.5 31 31 A R E - F 0 67B 106 -2,-0.7 2,-0.4 -6,-0.3 36,-0.3 -0.609 21.0-160.3 -75.9 100.6 -0.7 3.7 12.9 32 32 A I E - F 0 66B 0 34,-1.4 34,-2.3 -2,-1.1 2,-0.6 -0.696 2.7-149.1 -87.1 131.8 -0.6 3.0 9.2 33 33 A G E -EF 21 65B 13 -12,-1.8 -12,-1.2 -2,-0.4 2,-0.6 -0.895 13.8-176.6-107.4 120.8 0.7 5.7 6.9 34 34 A V E -EF 20 64B 5 30,-3.2 30,-1.3 -2,-0.6 2,-0.8 -0.901 2.2-173.3-118.2 103.7 -0.6 6.0 3.3 35 35 A N E +E 19 0B 62 -16,-1.6 -16,-1.4 -2,-0.6 -2,-0.0 -0.840 23.8 146.8 -99.5 107.5 1.1 8.7 1.2 36 36 A A - 0 0 11 -2,-0.8 -18,-0.1 -18,-0.2 2,-0.1 -0.999 42.1-119.8-142.7 144.2 -0.7 9.1 -2.1 37 37 A P - 0 0 37 0, 0.0 3,-0.4 0, 0.0 -20,-0.1 -0.418 19.6-127.0 -80.3 156.4 -1.4 12.0 -4.5 38 38 A K S S+ 0 0 137 1,-0.2 3,-0.0 -2,-0.1 4,-0.0 -0.086 92.5 84.7 -93.3 34.6 -4.9 13.2 -5.4 39 39 A E S S+ 0 0 156 2,-0.1 -1,-0.2 0, 0.0 2,-0.2 0.817 80.9 56.4-100.4 -44.1 -4.1 13.0 -9.2 40 40 A V S S- 0 0 30 -3,-0.4 2,-1.0 1,-0.1 38,-0.1 -0.523 107.7 -80.1 -89.3 158.1 -4.8 9.3 -9.8 41 41 A S E +H 77 0D 65 36,-0.8 36,-1.7 -2,-0.2 2,-0.5 -0.393 64.4 166.9 -59.6 97.8 -8.1 7.5 -9.1 42 42 A V E -H 76 0D 39 -2,-1.0 2,-0.4 34,-0.3 34,-0.3 -0.968 12.3-179.1-122.5 120.9 -7.8 6.9 -5.4 43 43 A H E +H 75 0D 136 32,-2.9 32,-2.4 -2,-0.5 2,-0.2 -0.956 12.6 151.6-120.7 136.3 -10.7 5.9 -3.2 44 44 A R - 0 0 34 -2,-0.4 30,-0.1 30,-0.2 -2,-0.0 -0.830 51.9 -44.7-146.6-176.3 -10.6 5.3 0.5 45 45 A E > - 0 0 83 -2,-0.2 4,-1.9 1,-0.1 5,-0.4 -0.316 48.8-132.8 -58.8 133.8 -12.7 5.4 3.7 46 46 A E H > S+ 0 0 146 1,-0.2 4,-2.1 2,-0.2 5,-0.2 0.959 106.6 42.4 -51.8 -60.3 -14.8 8.5 3.9 47 47 A I H > S+ 0 0 89 2,-0.2 4,-1.3 1,-0.2 5,-0.3 0.890 108.7 63.1 -55.1 -42.9 -13.9 9.3 7.5 48 48 A Y H >> S+ 0 0 15 1,-0.2 4,-1.4 2,-0.2 3,-1.1 0.953 115.8 26.8 -46.5 -68.1 -10.3 8.4 6.8 49 49 A Q H 3<>S+ 0 0 55 -4,-1.9 5,-2.7 1,-0.2 -1,-0.2 0.718 112.2 72.2 -70.5 -21.0 -9.6 11.1 4.3 50 50 A R H 3<5S+ 0 0 100 -4,-2.1 6,-3.4 -5,-0.4 7,-0.3 0.742 111.6 28.5 -66.0 -23.0 -12.3 13.3 5.9 51 51 A I H <<5S+ 0 0 94 -4,-1.3 -2,-0.2 -3,-1.1 -1,-0.2 0.620 137.9 25.0-109.9 -21.6 -9.9 13.8 8.8 52 52 A Q T <5S+ 0 0 77 -4,-1.4 -3,-0.2 -5,-0.3 3,-0.2 0.812 129.8 30.9-107.1 -58.0 -6.6 13.5 7.1 53 53 A A T 5S+ 0 0 28 1,-0.3 2,-0.5 -5,-0.3 -3,-0.2 1.000 131.4 10.3 -66.4 -73.5 -7.1 14.4 3.4 54 54 A E S - 0 0 79 -2,-0.2 4,-1.9 1,-0.1 5,-0.4 -0.316 48.8-132.8 -58.7 133.7 10.7 -4.5 -3.1 108 46 B E H > S+ 0 0 108 1,-0.2 4,-2.1 2,-0.2 11,-0.2 0.959 106.6 42.4 -51.8 -60.3 12.5 -6.9 -5.5 109 47 B I H > S+ 0 0 90 2,-0.2 4,-1.3 1,-0.2 5,-0.3 0.890 108.7 63.1 -55.0 -42.8 12.4 -9.9 -3.1 110 48 B Y H >> S+ 0 0 15 1,-0.2 4,-1.4 2,-0.2 3,-1.1 0.953 115.8 26.7 -46.6 -68.0 8.8 -9.1 -2.2 111 49 B Q H 3<>S+ 0 0 47 -4,-1.9 5,-2.7 1,-0.2 -1,-0.2 0.718 112.2 72.2 -70.6 -21.0 7.3 -9.6 -5.7 112 50 B R H 3<5S+ 0 0 64 -4,-2.1 6,-3.0 -5,-0.4 -1,-0.2 0.741 111.6 28.5 -66.0 -22.9 10.1 -12.0 -6.5 113 51 B I H <<5S+ 0 0 100 -4,-1.3 -2,-0.2 -3,-1.1 -1,-0.2 0.619 137.9 25.0-110.0 -21.8 8.5 -14.5 -4.1 114 52 B Q T <5S+ 0 0 77 -4,-1.4 -3,-0.2 -5,-0.3 3,-0.2 0.812 129.9 30.8-107.0 -58.1 4.8 -13.4 -4.4 115 53 B A T 5S+ 0 0 28 1,-0.3 2,-0.5 -5,-0.3 -3,-0.2 1.000 131.7 9.0 -66.5 -73.5 4.3 -11.7 -7.8 116 54 B E S