==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 15-NOV-04 1Y0J . COMPND 2 MOLECULE: ERYTHROID TRANSCRIPTION FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR C.K.LIEW,R.J.Y.SIMPSON,A.H.Y.KWAN,L.A.CROFTS,F.E.LOUGHLIN, . 75 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5818.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 44.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 6.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 16.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 200 A E 0 0 198 0, 0.0 3,-0.1 0, 0.0 11,-0.1 0.000 360.0 360.0 360.0 -67.9 -1.4 -14.7 0.5 2 201 A A - 0 0 56 1,-0.3 2,-0.3 9,-0.3 9,-0.1 0.985 360.0 -31.6 -73.0 -60.8 -3.5 -12.9 -2.2 3 202 A R - 0 0 78 8,-0.1 2,-0.6 6,-0.0 -1,-0.3 -0.922 63.6 -95.4-152.2 173.1 -1.7 -9.6 -2.2 4 203 A E - 0 0 21 -2,-0.3 20,-0.2 -3,-0.1 2,-0.2 -0.876 34.8-140.9-102.7 115.5 0.1 -7.2 0.1 5 204 A C - 0 0 1 -2,-0.6 20,-0.1 1,-0.1 6,-0.1 -0.476 0.9-150.9 -72.8 145.8 -2.0 -4.4 1.5 6 205 A V S S+ 0 0 0 18,-0.4 65,-0.9 -2,-0.2 64,-0.2 0.505 92.0 36.1 -94.9 -6.3 -0.3 -1.0 1.8 7 206 A N S S- 0 0 46 63,-0.1 -1,-0.1 64,-0.1 18,-0.0 0.737 140.0 -5.1-115.9 -38.5 -2.3 0.2 4.8 8 207 A C S S- 0 0 50 2,-0.1 3,-0.1 0, 0.0 -2,-0.1 0.642 76.4-130.8-126.3 -41.0 -2.8 -2.8 7.0 9 208 A G + 0 0 34 1,-0.3 2,-0.7 47,-0.0 -6,-0.0 0.550 48.8 155.1 94.7 9.7 -1.5 -5.9 5.3 10 209 A A + 0 0 50 1,-0.2 -1,-0.3 -6,-0.1 3,-0.2 -0.615 19.0 177.7 -75.4 110.3 -4.6 -7.9 5.9 11 210 A T + 0 0 34 -2,-0.7 2,-0.4 1,-0.2 -9,-0.3 0.504 65.3 84.9 -90.1 -4.9 -4.8 -10.6 3.2 12 211 A A + 0 0 97 -11,-0.1 -1,-0.2 -10,-0.1 -2,-0.1 -0.171 61.0 135.2 -90.7 42.0 -8.0 -12.1 4.7 13 212 A T - 0 0 24 -2,-0.4 3,-0.1 -3,-0.2 -2,-0.0 -0.710 62.3-130.0 -92.5 141.0 -10.2 -9.6 2.9 14 213 A P S S- 0 0 115 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.805 90.2 -1.3 -57.3 -30.6 -13.4 -10.9 1.1 15 214 A L - 0 0 117 2,-0.0 2,-0.4 -3,-0.0 12,-0.2 -0.985 69.5-125.2-157.9 157.7 -12.3 -9.0 -2.0 16 215 A W - 0 0 58 -2,-0.3 2,-0.4 10,-0.1 10,-0.3 -0.885 17.9-158.5-110.7 141.0 -9.6 -6.8 -3.3 17 216 A R E -A 25 0A 171 8,-2.8 8,-2.5 -2,-0.4 2,-0.4 -0.973 10.0-141.7-121.8 129.4 -10.1 -3.4 -4.9 18 217 A R E -A 24 0A 141 -2,-0.4 6,-0.2 6,-0.2 2,-0.1 -0.760 17.0-133.7 -92.6 133.3 -7.6 -1.7 -7.2 19 218 A D > - 0 0 15 4,-2.0 3,-1.8 -2,-0.4 11,-0.0 -0.347 28.7-103.5 -78.2 164.3 -7.1 2.1 -6.9 20 219 A R T 3 S+ 0 0 227 1,-0.3 -1,-0.1 2,-0.2 -2,-0.0 0.774 122.5 59.7 -60.5 -27.3 -7.0 4.4 -9.9 21 220 A T T 3 S- 0 0 96 1,-0.0 -1,-0.3 2,-0.0 -3,-0.0 0.680 124.7-104.2 -74.7 -16.5 -3.3 4.6 -9.6 22 221 A G S < S+ 0 0 25 -3,-1.8 -2,-0.2 1,-0.3 2,-0.1 0.519 72.9 141.7 106.2 9.5 -3.1 0.8 -10.0 23 222 A H - 0 0 15 39,-0.1 -4,-2.0 40,-0.1 2,-0.6 -0.409 51.6-119.5 -82.7 160.0 -2.5 -0.2 -6.4 24 223 A Y E +A 18 0A 83 -6,-0.2 -18,-0.4 -20,-0.2 2,-0.3 -0.892 38.9 169.2-103.9 116.9 -4.0 -3.2 -4.7 25 224 A L E -A 17 0A 6 -8,-2.5 -8,-2.8 -2,-0.6 -20,-0.1 -0.812 26.3-122.7-122.4 164.7 -6.2 -2.4 -1.7 26 225 A C - 0 0 4 -2,-0.3 4,-0.4 -10,-0.3 -9,-0.2 0.016 42.3 -85.7 -89.6-159.9 -8.5 -4.5 0.5 27 226 A N S S+ 0 0 84 -12,-0.2 -11,-0.1 3,-0.2 4,-0.1 0.619 127.1 38.2 -84.8 -14.0 -12.2 -4.0 1.3 28 227 A A S > S+ 0 0 67 2,-0.1 4,-1.7 3,-0.1 -1,-0.1 0.878 123.6 33.1 -99.1 -63.1 -11.2 -1.7 4.2 29 228 A C H > S+ 0 0 16 1,-0.2 4,-1.5 2,-0.2 -2,-0.1 0.838 120.8 53.7 -64.9 -32.7 -8.2 0.3 3.0 30 229 A G H > S+ 0 0 6 -4,-0.4 4,-0.9 1,-0.2 -1,-0.2 0.881 105.7 52.2 -69.1 -37.3 -9.6 0.3 -0.5 31 230 A L H > S+ 0 0 96 1,-0.2 4,-3.2 2,-0.2 3,-0.5 0.864 104.4 57.9 -66.3 -36.2 -12.9 1.7 0.7 32 231 A Y H X S+ 0 0 81 -4,-1.7 4,-2.9 1,-0.2 5,-0.4 0.922 102.1 53.4 -59.8 -45.1 -11.1 4.5 2.5 33 232 A H H < S+ 0 0 39 -4,-1.5 4,-0.4 1,-0.2 -1,-0.2 0.763 115.5 42.2 -62.9 -25.0 -9.5 5.7 -0.7 34 233 A K H < S+ 0 0 160 -4,-0.9 -2,-0.2 -3,-0.5 -1,-0.2 0.926 119.4 39.2 -86.0 -53.1 -13.0 5.8 -2.3 35 234 A M H < S+ 0 0 169 -4,-3.2 -2,-0.2 1,-0.2 -3,-0.2 0.904 116.7 50.2 -65.5 -44.6 -15.0 7.4 0.6 36 235 A N S < S- 0 0 67 -4,-2.9 2,-1.1 -5,-0.3 -1,-0.2 0.859 88.3-157.3 -63.5 -35.4 -12.2 9.8 1.6 37 236 A G + 0 0 59 -5,-0.4 -1,-0.2 -4,-0.4 -2,-0.1 -0.252 65.7 74.3 86.8 -48.7 -11.8 11.0 -2.0 38 237 A Q 0 0 151 -2,-1.1 -1,-0.3 -3,-0.1 -2,-0.1 -0.097 360.0 360.0 -84.3-172.7 -8.3 12.2 -1.4 39 238 A N 0 0 86 -3,-0.1 -6,-0.1 -2,-0.0 -1,-0.0 -0.839 360.0 360.0-109.0 360.0 -5.2 10.1 -0.9 40 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 41 1 B G 0 0 110 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 174.2 27.2 7.2 -7.6 42 2 B S - 0 0 124 1,-0.1 0, 0.0 2,-0.1 0, 0.0 -0.288 360.0 -78.6 57.5-134.2 25.2 6.4 -4.5 43 3 B L + 0 0 135 1,-0.0 2,-2.9 3,-0.0 -1,-0.1 0.605 50.7 174.6-128.3 -47.5 22.3 3.9 -5.2 44 4 B L + 0 0 142 2,-0.0 -2,-0.1 0, 0.0 -1,-0.0 -0.370 65.2 70.3 68.8 -65.7 19.5 5.9 -6.8 45 5 B K S S- 0 0 178 -2,-2.9 2,-0.5 1,-0.0 0, 0.0 -0.714 86.4-128.9 -87.2 125.6 17.4 2.8 -7.4 46 6 B P - 0 0 112 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 -0.625 24.0-179.1 -77.7 119.6 16.0 1.1 -4.3 47 7 B A + 0 0 78 -2,-0.5 2,-0.5 2,-0.0 -2,-0.0 0.364 58.1 94.2 -97.2 3.5 16.7 -2.6 -4.1 48 8 B R + 0 0 200 1,-0.1 3,-0.0 13,-0.0 0, 0.0 -0.855 42.1 173.7-102.6 128.1 14.8 -3.0 -0.9 49 9 B F + 0 0 123 -2,-0.5 9,-3.1 9,-0.1 2,-0.3 -0.160 60.9 76.1-121.8 36.5 11.2 -4.0 -0.9 50 10 B M B S-B 57 0B 100 7,-0.3 7,-0.2 9,-0.1 2,-0.2 -0.922 76.2-128.1-151.3 118.9 10.7 -4.4 2.9 51 11 B C > - 0 0 6 5,-1.6 4,-1.2 -2,-0.3 -2,-0.0 -0.461 11.3-153.8 -69.1 136.5 10.3 -1.6 5.4 52 12 B L T 4 S+ 0 0 156 -2,-0.2 -1,-0.1 2,-0.2 5,-0.0 0.955 91.9 37.6 -76.3 -54.4 12.6 -1.7 8.3 53 13 B P T 4 S+ 0 0 123 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.904 124.9 41.2 -65.3 -42.8 10.6 0.2 11.0 54 14 B C T 4 S- 0 0 39 2,-0.1 -2,-0.2 1,-0.1 3,-0.1 0.955 91.0-148.9 -69.5 -53.3 7.3 -1.3 9.8 55 15 B G < + 0 0 42 -4,-1.2 2,-0.5 1,-0.3 -3,-0.1 0.418 51.2 130.5 96.0 0.0 8.5 -4.8 9.2 56 16 B I - 0 0 42 -52,-0.0 -5,-1.6 0, 0.0 -1,-0.3 -0.779 43.9-153.9 -92.5 122.9 6.1 -5.5 6.4 57 17 B A B -B 50 0B 53 -2,-0.5 2,-0.3 -7,-0.2 -7,-0.3 -0.717 6.9-155.2 -96.2 147.4 7.7 -6.9 3.2 58 18 B F - 0 0 10 -9,-3.1 -9,-0.1 -2,-0.3 -53,-0.0 -0.749 20.2-156.0-118.0 165.2 6.2 -6.5 -0.3 59 19 B S S S+ 0 0 75 -2,-0.3 -1,-0.1 1,-0.2 3,-0.1 0.453 86.4 52.7-114.3 -9.5 6.5 -8.4 -3.5 60 20 B S >> - 0 0 25 -11,-0.1 4,-1.5 1,-0.1 3,-0.8 -0.969 63.1-157.9-133.6 116.1 5.7 -5.5 -5.7 61 21 B P H 3> S+ 0 0 94 0, 0.0 4,-1.1 0, 0.0 -1,-0.1 0.782 93.4 66.7 -60.8 -26.8 7.6 -2.1 -5.5 62 22 B S H 3> S+ 0 0 84 1,-0.2 4,-0.5 2,-0.2 3,-0.2 0.882 106.6 38.5 -62.6 -40.0 4.6 -0.5 -7.2 63 23 B T H X> S+ 0 0 3 -3,-0.8 4,-1.7 1,-0.2 3,-0.6 0.779 103.5 70.5 -81.8 -26.5 2.4 -1.1 -4.1 64 24 B L H 3X S+ 0 0 19 -4,-1.5 4,-2.7 1,-0.2 -1,-0.2 0.829 91.0 63.1 -57.7 -31.9 5.3 -0.4 -1.7 65 25 B E H 3< S+ 0 0 115 -4,-1.1 -1,-0.2 1,-0.2 -2,-0.2 0.919 104.9 43.7 -58.3 -46.2 4.9 3.2 -2.8 66 26 B A H X< S+ 0 0 8 -3,-0.6 3,-0.7 -4,-0.5 5,-0.3 0.814 111.2 56.3 -69.8 -30.9 1.4 3.3 -1.3 67 27 B H H >X>S+ 0 0 0 -4,-1.7 3,-1.6 1,-0.2 4,-1.5 0.939 106.6 48.0 -65.3 -46.2 2.6 1.5 1.7 68 28 B Q T 3<5S+ 0 0 73 -4,-2.7 7,-0.4 1,-0.3 -1,-0.2 0.434 108.7 57.4 -75.8 1.6 5.3 4.1 2.4 69 29 B A T <45S+ 0 0 17 -3,-0.7 -1,-0.3 -5,-0.2 -2,-0.2 0.331 127.2 10.1-110.4 2.5 2.6 6.8 1.9 70 30 B Y T X45S+ 0 0 27 -3,-1.6 3,-1.1 -64,-0.2 -2,-0.2 0.454 126.9 45.8-141.1 -62.7 0.3 5.4 4.7 71 31 B Y T 3<5S+ 0 0 92 -4,-1.5 2,-1.3 -65,-0.9 -3,-0.2 0.964 117.2 44.5 -57.4 -58.5 1.9 2.7 6.9 72 32 B C T 3