==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=15-MAY-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 07-DEC-10 2Y1B . COMPND 2 MOLECULE: PUTATIVE OUTER MEMBRANE PROTEIN, SIGNAL; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR J.P.DECLERCQ,P.LEVERRIER,A.BOUJTAT,J.F.COLLET . 86 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5271.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 64 74.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 29.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 14.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 14.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 47 A T 0 0 63 0, 0.0 2,-0.6 0, 0.0 47,-0.1 0.000 360.0 360.0 360.0 51.6 31.0 28.6 3.8 2 48 A P + 0 0 133 0, 0.0 2,-0.7 0, 0.0 0, 0.0 -0.349 360.0 140.4 -72.7 44.6 34.8 27.8 4.1 3 49 A V - 0 0 3 -2,-0.6 2,-0.3 54,-0.0 54,-0.3 -0.896 53.6-135.1 -96.5 112.0 32.9 24.7 5.4 4 50 A R E -a 57 0A 155 52,-1.7 54,-2.2 -2,-0.7 2,-0.7 -0.582 11.2-139.5 -72.4 129.7 34.8 21.8 4.0 5 51 A I E -a 58 0A 27 -2,-0.3 2,-0.3 52,-0.2 54,-0.2 -0.838 17.1-170.4 -93.5 117.6 32.7 19.1 2.6 6 52 A Y E -a 59 0A 12 52,-3.4 54,-2.9 -2,-0.7 3,-0.1 -0.773 7.0-170.9 -96.2 151.5 33.8 15.6 3.4 7 53 A T + 0 0 76 -2,-0.3 2,-0.3 1,-0.3 52,-0.1 0.388 67.1 45.1-125.0 1.0 32.1 12.7 1.6 8 54 A N > - 0 0 94 1,-0.1 3,-1.2 0, 0.0 -1,-0.3 -0.991 67.9-137.5-152.1 133.9 33.3 9.7 3.4 9 55 A A G > S+ 0 0 61 -2,-0.3 3,-1.7 1,-0.3 4,-0.4 0.744 102.1 71.8 -63.7 -23.0 33.7 8.9 7.1 10 56 A E G > S+ 0 0 139 1,-0.3 3,-1.2 2,-0.2 -1,-0.3 0.851 88.8 61.4 -60.7 -34.1 37.1 7.4 6.2 11 57 A E G < S+ 0 0 88 -3,-1.2 -1,-0.3 1,-0.2 -2,-0.2 0.671 101.9 53.5 -64.3 -19.3 38.4 10.9 5.6 12 58 A L G X S+ 0 0 14 -3,-1.7 3,-2.7 -4,-0.3 -1,-0.2 0.524 74.1 127.2 -94.4 -8.4 37.6 11.7 9.3 13 59 A V T < S+ 0 0 104 -3,-1.2 -3,-0.0 -4,-0.4 0, 0.0 -0.306 82.7 11.1 -56.8 122.7 39.5 8.8 10.8 14 60 A G T 3 S+ 0 0 78 1,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.483 100.7 105.6 86.9 4.9 41.8 10.3 13.4 15 61 A K < - 0 0 93 -3,-2.7 -1,-0.1 2,-0.0 2,-0.0 -0.925 61.3-148.0-111.9 104.3 40.3 13.8 13.4 16 62 A P + 0 0 97 0, 0.0 70,-0.9 0, 0.0 2,-0.3 -0.385 30.4 164.2 -61.0 149.5 38.2 14.3 16.7 17 63 A F E -B 85 0A 82 68,-0.2 2,-0.6 -2,-0.0 68,-0.2 -0.971 38.6-109.7-157.0 168.0 35.3 16.6 16.1 18 64 A R E -B 84 0A 156 66,-2.6 66,-1.7 -2,-0.3 2,-0.8 -0.945 24.7-137.5-107.9 124.8 32.0 17.8 17.5 19 65 A D E -B 83 0A 93 -2,-0.6 64,-0.2 64,-0.2 3,-0.1 -0.698 19.7-176.6 -75.9 113.4 28.9 16.8 15.8 20 66 A L E - 0 0 65 62,-2.4 2,-0.2 -2,-0.8 63,-0.2 0.555 50.3 -91.1 -90.2 -7.4 26.8 19.9 15.8 21 67 A G E -B 82 0A 23 61,-0.8 61,-2.8 -3,-0.0 -1,-0.3 -0.552 52.8 -42.9 121.9 174.5 23.8 18.2 14.2 22 68 A E E -B 81 0A 114 59,-0.2 2,-0.3 -2,-0.2 59,-0.2 -0.470 46.9-173.1 -85.3 145.6 22.1 17.3 10.9 23 69 A V E -B 80 0A 10 57,-2.8 57,-2.5 -2,-0.1 2,-0.3 -0.936 3.7-165.0-133.7 155.4 21.8 19.8 8.0 24 70 A S E -B 79 0A 61 -2,-0.3 2,-0.3 55,-0.2 55,-0.2 -0.981 4.7-169.5-137.0 149.7 20.0 19.7 4.6 25 71 A G E -B 78 0A 3 53,-2.1 53,-2.3 -2,-0.3 2,-0.3 -0.992 13.7-173.6-137.8 141.5 20.1 21.7 1.4 26 72 A D E -B 77 0A 56 -2,-0.3 2,-0.4 51,-0.2 51,-0.2 -0.930 22.3-155.7-134.2 161.5 17.6 21.5 -1.4 27 73 A S E -B 76 0A 14 49,-2.8 49,-2.8 -2,-0.3 2,-0.5 -0.985 22.1-155.5-131.6 122.0 16.9 22.7 -5.0 28 74 A a E -B 75 0A 57 -2,-0.4 2,-0.8 47,-0.2 47,-0.2 -0.905 14.2-162.6-104.5 121.3 13.2 22.6 -6.1 29 75 A Q E -B 74 0A 18 45,-3.7 45,-2.0 -2,-0.5 44,-1.3 -0.928 15.3-173.5 -94.7 106.5 12.1 22.4 -9.7 30 76 A A + 0 0 61 -2,-0.8 2,-0.3 42,-0.3 43,-0.3 0.888 62.0 18.7 -68.8 -44.9 8.5 23.6 -9.1 31 77 A S S > S- 0 0 41 4,-0.1 3,-1.5 -3,-0.1 43,-0.1 -0.893 74.2-114.4-126.1 153.8 7.3 23.0 -12.6 32 78 A N T 3 S+ 0 0 99 -2,-0.3 -1,-0.1 1,-0.3 -2,-0.0 0.748 116.6 60.0 -37.6 -46.4 8.1 21.1 -15.7 33 79 A Q T 3 S+ 0 0 157 2,-0.0 -1,-0.3 3,-0.0 2,-0.1 0.618 94.1 81.2 -71.4 -17.1 8.7 24.3 -17.3 34 80 A D S < S- 0 0 79 -3,-1.5 -5,-0.1 1,-0.2 0, 0.0 -0.419 94.6 -78.1 -89.6 169.8 11.4 25.4 -14.9 35 81 A S - 0 0 98 1,-0.1 -1,-0.2 -2,-0.1 -4,-0.1 -0.197 59.2 -98.1 -51.8 148.6 15.1 24.5 -14.9 36 82 A P - 0 0 99 0, 0.0 -1,-0.1 0, 0.0 -8,-0.1 -0.208 56.3 -70.0 -65.9 168.6 15.8 21.1 -13.5 37 83 A P - 0 0 26 0, 0.0 2,-0.7 0, 0.0 38,-0.1 -0.277 49.2-127.2 -57.2 143.4 16.9 20.7 -9.8 38 84 A S > - 0 0 35 1,-0.2 4,-2.3 38,-0.1 5,-0.2 -0.834 19.4-170.7-100.3 109.1 20.4 22.0 -9.1 39 85 A I H > S+ 0 0 103 -2,-0.7 4,-2.3 1,-0.2 5,-0.2 0.941 90.5 52.0 -62.8 -43.3 22.7 19.5 -7.4 40 86 A P H > S+ 0 0 93 0, 0.0 4,-2.3 0, 0.0 -1,-0.2 0.903 109.0 48.9 -60.9 -43.1 25.3 22.1 -6.8 41 87 A T H > S+ 0 0 34 2,-0.2 4,-2.8 1,-0.2 5,-0.2 0.914 108.8 54.3 -63.5 -38.9 22.7 24.5 -5.2 42 88 A A H X S+ 0 0 0 -4,-2.3 4,-1.8 1,-0.2 36,-0.3 0.946 112.9 44.0 -58.7 -43.1 21.4 21.6 -2.9 43 89 A R H X S+ 0 0 104 -4,-2.3 4,-1.9 1,-0.2 -1,-0.2 0.877 112.8 50.0 -71.1 -40.1 25.0 21.0 -1.7 44 90 A K H X S+ 0 0 101 -4,-2.3 4,-2.3 -5,-0.2 -1,-0.2 0.896 109.1 51.8 -63.7 -45.4 25.8 24.7 -1.2 45 91 A R H X S+ 0 0 106 -4,-2.8 4,-2.6 1,-0.2 -2,-0.2 0.869 108.8 50.8 -62.0 -36.6 22.7 25.3 0.8 46 92 A M H X S+ 0 0 0 -4,-1.8 4,-2.1 -5,-0.2 -1,-0.2 0.907 110.8 50.5 -57.2 -46.8 23.5 22.3 3.1 47 93 A Q H X S+ 0 0 32 -4,-1.9 4,-2.2 2,-0.2 -2,-0.2 0.890 110.1 48.1 -63.8 -43.5 26.9 23.8 3.5 48 94 A I H X S+ 0 0 67 -4,-2.3 4,-2.4 2,-0.2 -2,-0.2 0.871 108.6 55.0 -63.1 -44.2 25.5 27.3 4.3 49 95 A N H X S+ 0 0 57 -4,-2.6 4,-0.5 2,-0.2 -2,-0.2 0.904 109.7 47.0 -54.5 -40.4 23.2 25.6 6.8 50 96 A A H ><>S+ 0 0 0 -4,-2.1 5,-2.2 1,-0.2 3,-1.6 0.922 108.7 55.7 -66.6 -41.7 26.2 24.0 8.5 51 97 A S H ><5S+ 0 0 41 -4,-2.2 3,-2.3 1,-0.3 -2,-0.2 0.911 99.2 60.0 -60.1 -39.0 28.0 27.4 8.4 52 98 A K H 3<5S+ 0 0 149 -4,-2.4 -1,-0.3 1,-0.3 -2,-0.2 0.746 102.6 52.7 -61.6 -19.6 25.1 28.9 10.3 53 99 A M T <<5S- 0 0 61 -3,-1.6 -1,-0.3 -4,-0.5 -2,-0.2 0.212 123.8-107.2 -94.3 9.9 25.8 26.4 13.2 54 100 A K T < 5 + 0 0 177 -3,-2.3 -3,-0.2 1,-0.2 -2,-0.1 0.795 61.8 171.1 64.8 31.3 29.4 27.6 13.1 55 101 A A < - 0 0 12 -5,-2.2 29,-0.2 1,-0.1 -1,-0.2 -0.428 33.9-159.8 -71.6 152.3 30.5 24.4 11.5 56 102 A N S S- 0 0 73 27,-2.7 -52,-1.7 1,-0.2 2,-0.3 0.422 77.0 -1.6 -93.1 -28.8 34.0 23.9 10.2 57 103 A A E -aC 4 83A 1 26,-1.7 26,-3.0 -54,-0.3 2,-0.3 -0.942 61.1-137.7-163.3 163.9 33.0 21.0 8.0 58 104 A V E -aC 5 82A 0 -54,-2.2 -52,-3.4 -2,-0.3 2,-0.7 -0.979 10.8-143.1-138.4 137.0 30.1 18.8 6.9 59 105 A L E -aC 6 81A 22 22,-2.3 22,-2.0 -2,-0.3 2,-0.4 -0.908 23.3-143.8 -96.2 112.7 30.0 15.1 6.3 60 106 A L E - C 0 80A 25 -54,-2.9 20,-0.3 -2,-0.7 3,-0.1 -0.628 20.3-178.6 -80.4 126.3 27.8 14.6 3.4 61 107 A H E - 0 0 90 18,-3.4 2,-0.3 -2,-0.4 19,-0.2 0.876 57.6 -35.9 -88.9 -48.6 25.8 11.5 3.9 62 108 A S E - C 0 79A 61 17,-1.6 17,-3.1 2,-0.0 -1,-0.4 -0.986 42.2-147.6-167.6 159.0 23.8 11.4 0.7 63 109 A b E - C 0 78A 53 -2,-0.3 2,-0.3 15,-0.3 15,-0.2 -0.940 18.4-177.5-130.6 159.2 22.0 13.3 -2.0 64 110 A E E - C 0 77A 125 13,-2.5 13,-2.1 -2,-0.3 2,-0.5 -0.991 26.3-135.9-154.8 145.0 19.1 12.3 -4.1 65 111 A V E - C 0 76A 83 -2,-0.3 2,-0.3 11,-0.2 11,-0.2 -0.930 37.2-173.2 -96.6 122.7 16.9 13.6 -6.9 66 112 A T E - C 0 75A 43 9,-3.0 9,-2.5 -2,-0.5 -2,-0.0 -0.906 33.3-165.3-123.0 150.1 13.2 12.9 -6.0 67 113 A S S S+ 0 0 75 -2,-0.3 -1,-0.1 7,-0.2 5,-0.0 0.566 81.9 72.2 -99.5 -17.2 9.9 13.3 -7.8 68 114 A G + 0 0 59 7,-0.1 -1,-0.1 3,-0.0 6,-0.1 0.819 62.7 125.8 -71.2 -37.5 7.7 13.0 -4.6 69 115 A T > - 0 0 27 1,-0.1 3,-1.5 2,-0.1 -3,-0.0 0.160 63.2-124.4 -36.8 129.8 8.3 16.4 -2.8 70 116 A P T 3 S+ 0 0 138 0, 0.0 -1,-0.1 0, 0.0 3,-0.0 0.836 105.6 29.8 -38.2 -50.2 5.3 18.5 -1.8 71 117 A G T 3 S+ 0 0 58 1,-0.1 2,-0.4 2,-0.0 3,-0.1 0.494 112.0 71.7 -99.1 10.1 6.4 21.7 -3.6 72 118 A a < - 0 0 15 -3,-1.5 -42,-0.3 1,-0.2 3,-0.2 -0.967 55.6-155.3-139.5 127.9 8.3 20.3 -6.5 73 119 A Y S S+ 0 0 96 -44,-1.3 2,-0.3 -2,-0.4 -43,-0.2 0.959 104.3 1.9 -52.5 -55.9 8.0 18.5 -9.7 74 120 A R E S-B 29 0A 82 -45,-2.0 -45,-3.7 -3,-0.1 2,-0.3 -0.993 74.2-169.7-131.3 151.8 11.5 17.4 -9.0 75 121 A Q E -BC 28 66A 32 -9,-2.5 -9,-3.0 -2,-0.3 2,-0.5 -0.995 13.5-153.8-136.4 136.0 13.8 18.2 -6.0 76 122 A A E +BC 27 65A 3 -49,-2.8 -49,-2.8 -2,-0.3 2,-0.4 -0.922 23.4 178.5-100.8 134.0 17.5 17.7 -5.3 77 123 A V E -BC 26 64A 35 -13,-2.1 -13,-2.5 -2,-0.5 2,-0.4 -0.996 11.9-168.3-136.0 135.6 18.3 17.3 -1.6 78 124 A b E -BC 25 63A 2 -53,-2.3 -53,-2.1 -2,-0.4 2,-0.3 -0.992 9.0-164.8-121.0 141.0 21.7 16.7 0.1 79 125 A I E +BC 24 62A 72 -17,-3.1 -18,-3.4 -2,-0.4 -17,-1.6 -0.930 17.5 141.8-128.8 149.9 22.0 15.8 3.8 80 126 A G E -BC 23 60A 0 -57,-2.5 -57,-2.8 -2,-0.3 2,-0.5 -0.959 46.4 -86.6-169.3 177.7 24.9 15.7 6.2 81 127 A S E -BC 22 59A 12 -22,-2.0 -22,-2.3 -2,-0.3 2,-0.3 -0.908 34.5-137.7-108.9 118.7 26.4 16.3 9.7 82 128 A A E -BC 21 58A 0 -61,-2.8 -62,-2.4 -2,-0.5 -61,-0.8 -0.638 34.5-172.9 -75.5 135.2 27.6 19.7 10.5 83 129 A L E -BC 19 57A 3 -26,-3.0 -27,-2.7 -2,-0.3 -26,-1.7 -0.925 33.7-147.2-139.5 152.3 30.9 19.4 12.3 84 130 A N E -B 18 0A 41 -66,-1.7 -66,-2.6 -2,-0.3 2,-0.7 -0.977 18.5-161.8-116.7 104.2 33.5 21.3 14.2 85 131 A I E B 17 0A 15 -2,-0.6 -68,-0.2 -68,-0.2 -2,-0.0 -0.869 360.0 360.0 -88.9 120.4 36.8 19.7 13.6 86 132 A T 0 0 109 -70,-0.9 -2,-0.0 -2,-0.7 -1,-0.0 -0.530 360.0 360.0-104.6 360.0 39.0 21.0 16.4