==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 06-DEC-04 1Y6D . COMPND 2 MOLECULE: PHOSPHORELAY PROTEIN LUXU; . SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO HARVEYI; . AUTHOR D.L.ULRICH,D.KOJETIN,B.L.BASSLER,J.CAVANAGH,J.P.LORIA . 114 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6818.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 104 91.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 12.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 66 57.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 18 15.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 148 0, 0.0 2,-1.6 0, 0.0 71,-0.1 0.000 360.0 360.0 360.0-177.1 0.1 4.4 9.1 2 2 A N + 0 0 5 69,-0.1 6,-0.1 4,-0.1 3,-0.1 -0.671 360.0 164.7 -83.9 83.2 -2.4 5.8 6.6 3 3 A T >> - 0 0 56 -2,-1.6 4,-2.7 1,-0.1 3,-2.0 0.019 44.4 -44.3 -99.0-165.1 -3.9 8.2 9.2 4 4 A D T 34 S+ 0 0 112 1,-0.3 -1,-0.1 2,-0.2 -2,-0.0 -0.508 122.9 52.5 -67.7 81.0 -6.1 11.3 9.7 5 5 A V T 34 S+ 0 0 40 -2,-1.5 5,-0.3 -3,-0.1 -1,-0.3 -0.103 125.0 14.5-179.6 -39.1 -4.6 13.4 6.9 6 6 A L T <4>S+ 0 0 1 -3,-2.0 5,-1.5 3,-0.2 4,-0.4 0.717 120.0 54.1-122.9 -43.2 -4.9 11.1 4.0 7 7 A N T X>S+ 0 0 0 -4,-2.7 4,-2.0 3,-0.2 5,-1.5 0.985 120.3 27.7 -68.5 -62.7 -7.2 8.3 4.8 8 8 A Q T 45S+ 0 0 73 3,-0.2 -1,-0.2 -5,-0.2 5,-0.1 0.823 133.0 41.9 -69.5 -25.7 -10.3 10.0 5.9 9 9 A Q T >5S+ 0 0 90 3,-0.1 4,-2.0 2,-0.1 5,-0.2 0.931 130.0 19.0 -77.2 -75.8 -9.3 12.9 3.8 10 10 A K H >5S+ 0 0 56 -4,-0.4 4,-1.6 -5,-0.3 -3,-0.2 0.714 131.3 47.6 -72.1 -21.0 -8.0 11.5 0.4 11 11 A I H XS+ 0 0 56 -4,-1.6 5,-1.8 -5,-0.2 -2,-0.2 0.757 121.7 47.0 -83.6 -36.7 -11.4 9.5 -3.6 15 15 A S T >X5S+ 0 0 9 -4,-2.9 3,-2.7 3,-0.3 4,-0.6 0.844 90.0 90.8 -57.1-101.4 -13.2 6.5 -2.4 16 16 A A H 3>5S- 0 0 42 -4,-0.5 4,-1.2 1,-0.3 5,-0.2 -0.089 111.0 -4.5 49.4-134.6 -16.7 8.1 -2.1 17 17 A E H 345S+ 0 0 202 -4,-0.2 -1,-0.3 2,-0.1 -2,-0.1 0.501 149.2 40.8 -67.5 -5.3 -18.7 7.6 -5.4 18 18 A I H X>5S+ 0 0 87 -3,-2.7 3,-2.5 -5,-0.2 4,-1.1 0.609 121.2 23.8-106.5 -99.4 -15.5 6.2 -6.7 19 19 A G H 3X S+ 0 0 127 -3,-2.5 4,-0.6 -5,-0.2 -2,-0.3 0.773 134.0 38.4 -99.5 -34.5 -16.9 0.5 -5.3 22 22 A N H X S+ 0 0 78 -4,-1.1 4,-2.3 2,-0.1 -3,-0.2 0.890 107.2 56.0 -93.5 -40.9 -13.3 0.3 -6.7 23 23 A V H X S+ 0 0 0 -4,-1.3 4,-3.4 2,-0.2 5,-0.4 0.884 105.3 51.2 -66.5 -39.3 -11.0 0.2 -3.6 24 24 A P H > S+ 0 0 40 0, 0.0 4,-1.9 0, 0.0 5,-0.4 0.932 111.7 51.3 -58.7 -42.1 -12.6 -3.0 -1.9 25 25 A V H X S+ 0 0 81 -4,-0.6 4,-1.2 -6,-0.2 -2,-0.2 0.959 120.2 33.0 -55.1 -51.4 -12.2 -4.6 -5.3 26 26 A L H X S+ 0 0 31 -4,-2.3 4,-3.2 2,-0.2 5,-0.3 0.951 118.8 50.1 -71.5 -57.9 -8.5 -3.6 -5.5 27 27 A L H X S+ 0 0 2 -4,-3.4 4,-1.5 1,-0.2 5,-0.2 0.935 112.6 46.0 -47.7 -57.1 -7.5 -3.8 -1.8 28 28 A D H X S+ 0 0 96 -4,-1.9 4,-2.7 -5,-0.4 -1,-0.2 0.861 117.7 43.7 -61.2 -35.3 -8.9 -7.2 -1.2 29 29 A I H X>S+ 0 0 62 -4,-1.2 4,-3.0 -5,-0.4 5,-0.8 0.926 109.6 53.1 -79.3 -41.2 -7.4 -8.7 -4.4 30 30 A F H <5S+ 0 0 3 -4,-3.2 4,-0.4 1,-0.2 5,-0.2 0.798 118.1 40.2 -69.6 -21.7 -4.0 -7.2 -4.2 31 31 A L H X5S+ 0 0 20 -4,-1.5 4,-2.5 -5,-0.3 5,-0.2 0.955 118.3 43.4 -85.6 -56.6 -3.8 -8.6 -0.8 32 32 A G H X5S+ 0 0 35 -4,-2.7 4,-0.9 -5,-0.2 -2,-0.2 0.902 122.4 36.2 -57.5 -48.1 -5.4 -11.9 -1.3 33 33 A E H X5S+ 0 0 104 -4,-3.0 4,-1.8 2,-0.2 -1,-0.2 0.882 117.9 49.5 -78.9 -40.5 -3.7 -12.8 -4.6 34 34 A M H >> S+ 0 0 33 -2,-0.3 4,-0.9 1,-0.2 3,-0.7 -0.173 79.7 126.3 -90.7 33.6 11.8 -16.2 -4.1 47 47 A S H >> + 0 0 4 -6,-1.3 4,-2.4 1,-0.2 3,-1.2 0.892 64.2 64.2 -58.2 -56.0 8.6 -15.0 -5.4 48 48 A E H 3> S+ 0 0 38 -3,-0.5 4,-0.9 2,-0.3 -1,-0.2 0.832 97.5 59.4 -27.7 -41.3 7.9 -13.0 -2.2 49 49 A Q H <> S+ 0 0 111 -3,-0.7 4,-0.7 1,-0.2 3,-0.4 0.898 107.0 45.1 -60.1 -39.4 11.1 -11.1 -3.4 50 50 A L H XX S+ 0 0 81 -3,-1.2 4,-1.8 -4,-0.9 3,-0.7 0.933 98.2 76.3 -62.7 -45.5 8.9 -10.3 -6.5 51 51 A L H 3X S+ 0 0 8 -4,-2.4 4,-1.9 1,-0.3 5,-0.3 0.733 92.1 54.2 -39.0 -34.4 6.1 -9.5 -4.1 52 52 A Y H 3X S+ 0 0 31 -4,-0.9 4,-1.8 -3,-0.4 5,-0.3 0.966 108.9 39.7 -70.9 -54.6 7.7 -6.2 -3.3 53 53 A L H X S+ 0 0 41 -4,-1.8 4,-4.2 3,-0.2 3,-1.0 0.992 112.5 41.4 -64.9 -53.6 5.0 -5.6 -8.0 55 55 A E H 3X>S+ 0 0 8 -4,-1.9 5,-3.1 1,-0.3 6,-0.7 0.872 113.6 47.7 -73.3 -41.4 2.6 -4.6 -5.3 56 56 A I H 3<5S+ 0 0 13 -4,-1.8 -1,-0.3 -5,-0.3 -2,-0.2 0.698 125.1 34.7 -70.8 -16.1 4.0 -1.3 -4.3 57 57 A S H <<5S+ 0 0 74 -3,-1.0 -2,-0.2 -4,-0.7 -1,-0.2 0.739 127.4 41.1 -98.5 -38.4 4.1 -0.4 -8.1 58 58 A H H X5S+ 0 0 94 -4,-4.2 4,-0.7 -5,-0.2 -3,-0.2 0.975 135.0 1.9 -66.5 -83.4 1.0 -2.4 -8.9 59 59 A A H X>S+ 0 0 0 -4,-0.6 4,-2.9 2,-0.2 5,-0.7 0.866 132.5 46.7 -90.1 -43.2 -1.5 -1.9 -6.2 60 60 A L H >XS+ 0 0 10 -5,-3.1 4,-1.3 1,-0.2 5,-0.6 0.892 116.0 47.3 -70.8 -32.3 -0.0 0.6 -3.8 61 61 A K H 45S+ 0 0 77 -6,-0.7 4,-0.4 3,-0.2 -1,-0.2 0.834 120.5 41.9 -75.9 -20.7 1.1 2.7 -6.5 62 62 A S H X5S+ 0 0 61 -4,-0.7 4,-0.7 2,-0.1 -2,-0.2 0.977 126.5 26.7 -82.1 -67.0 -2.4 2.4 -8.0 63 63 A S H X5S+ 0 0 4 -4,-2.9 4,-3.9 1,-0.2 3,-0.3 0.802 123.7 50.6 -71.9 -32.8 -4.6 2.6 -5.0 64 64 A A H X< S+ 0 0 45 -4,-0.7 3,-0.5 -3,-0.3 -2,-0.2 0.803 136.3 30.5-102.3 -51.5 -5.5 7.7 -5.4 67 67 A F H 3< S+ 0 0 8 -4,-3.9 -3,-0.2 1,-0.2 -2,-0.2 0.090 136.5 22.3-106.2 21.6 -6.5 6.7 -1.9 68 68 A G T 3<> + 0 0 0 -4,-1.6 5,-1.0 -58,-0.1 2,-0.4 0.028 69.1 154.5-179.5 42.3 -3.2 7.5 -0.0 69 69 A A T < 5 + 0 0 55 -3,-0.5 -4,-0.1 -63,-0.2 2,-0.1 0.124 64.8 64.6 -71.5 24.9 -1.7 10.1 -2.3 70 70 A D T >>5S- 0 0 47 -2,-0.4 4,-1.1 -6,-0.2 3,-0.7 0.129 115.3 -21.3-121.6-132.7 0.0 11.4 0.7 71 71 A R H >>>S+ 0 0 138 1,-0.2 4,-2.9 2,-0.2 5,-0.8 0.918 129.0 52.7 -50.2 -65.8 2.7 9.6 2.8 72 72 A L H 34>S+ 0 0 20 1,-0.2 5,-0.6 3,-0.2 4,-0.4 0.746 103.9 63.1 -52.3 -24.1 2.2 5.9 2.1 73 73 A C H <>S+ 0 0 149 -4,-1.1 4,-2.9 -3,-0.5 5,-1.1 0.826 126.6 64.1-107.4 -33.1 6.0 8.0 -1.6 75 75 A R H <5S+ 0 0 120 -4,-2.9 -3,-0.2 -5,-0.3 -1,-0.1 0.754 112.9 39.2 -66.9 -23.4 7.1 7.7 1.9 76 76 A A H >XS+ 0 0 21 -5,-0.8 4,-2.1 -4,-0.4 5,-0.7 0.922 117.2 46.5 -87.6 -55.1 6.7 4.0 1.6 77 77 A I H XXS+ 0 0 76 -5,-1.1 5,-1.4 2,-0.2 4,-0.8 0.773 115.9 40.2 -84.5 -4.5 11.5 5.8 2.2 80 80 A D H X>S+ 0 0 23 -4,-2.1 5,-4.0 4,-0.2 6,-0.6 0.976 106.6 58.6-101.0 -60.2 11.4 2.1 2.6 81 81 A K H X - 0 0 14 -4,-1.2 3,-0.9 -5,-0.2 4,-0.6 -0.980 54.9-149.3-131.0 134.6 17.6 -6.4 6.9 90 90 A E T 34 S+ 0 0 185 -2,-0.4 -1,-0.1 1,-0.2 -3,-0.0 0.862 93.5 77.7 -68.3 -33.4 20.9 -6.4 5.0 91 91 A Q T 34 S- 0 0 121 1,-0.1 -1,-0.2 -3,-0.1 -5,-0.1 0.674 118.6 -94.7 -50.0 -24.8 19.5 -9.3 3.0 92 92 A G T <4 - 0 0 23 -3,-0.9 -6,-0.1 -7,-0.3 -2,-0.1 0.861 66.2 -58.2 98.4 69.8 17.3 -7.0 1.0 93 93 A M S <>S+ 0 0 42 -8,-1.1 5,-1.2 -4,-0.6 2,-0.6 0.599 84.7 156.5 34.3 32.0 13.8 -6.7 2.4 94 94 A E T 5S- 0 0 84 1,-0.1 -1,-0.2 3,-0.1 -45,-0.1 0.153 73.2 -21.3 -77.1 20.0 13.7 -10.5 2.0 95 95 A T T >>S+ 0 0 62 -2,-0.6 4,-2.2 -47,-0.1 5,-0.6 -0.163 127.6 58.7 176.0 -63.0 11.1 -11.1 4.6 96 96 A S T 45S+ 0 0 60 1,-0.2 -2,-0.1 2,-0.2 4,-0.0 0.644 113.7 35.3 -79.4 -14.4 10.6 -8.5 7.2 97 97 A E T >5S+ 0 0 8 -4,-0.3 4,-1.1 -12,-0.1 3,-0.2 0.878 119.9 44.9 -92.9 -56.1 9.7 -5.6 5.1 98 98 A M T >4X5S+ 0 0 74 -4,-2.2 3,-1.1 1,-0.2 4,-1.0 0.834 103.1 69.5 -68.6 -30.5 5.5 -9.5 4.4 100 100 A A H 3> S+ 0 0 55 -3,-1.1 4,-3.0 -4,-0.4 5,-0.4 0.929 112.3 46.0 -65.9 -48.2 0.1 -7.3 4.8 103 103 A H H X S+ 0 0 125 -4,-1.0 4,-1.4 -3,-0.2 5,-0.2 0.928 120.4 42.3 -62.2 -37.3 0.0 -6.9 8.6 104 104 A I H X S+ 0 0 70 -4,-2.9 4,-2.5 2,-0.2 5,-0.4 0.924 117.0 45.9 -74.7 -41.6 0.4 -3.2 8.2 105 105 A T H X>S+ 0 0 3 -4,-3.2 4,-2.3 -5,-0.3 5,-0.6 0.932 116.0 43.1 -71.8 -41.5 -2.0 -2.8 5.3 106 106 A R H X5S+ 0 0 166 -4,-3.0 4,-0.7 -5,-0.3 -1,-0.2 0.836 116.7 48.6 -78.9 -27.7 -4.8 -4.9 6.8 107 107 A D H <5S+ 0 0 116 -4,-1.4 4,-0.3 -5,-0.4 -2,-0.2 0.986 123.0 31.3 -66.8 -56.1 -4.4 -3.4 10.2 108 108 A A H >X5S+ 0 0 2 -4,-2.5 3,-2.1 -5,-0.2 4,-0.5 0.984 122.2 45.6 -68.0 -55.5 -4.4 0.1 8.9 109 109 A Y H >X5S+ 0 0 13 -4,-2.3 4,-3.3 -5,-0.4 3,-1.5 0.867 106.3 58.3 -63.3 -38.4 -6.7 -0.1 5.9 110 110 A R H 3<