==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT (CYTOCHROME) 09-MAY-90 1YCC . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR G.V.LOUIE,G.D.BRAYER . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6502.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 60.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A T 0 0 115 0, 0.0 3,-0.1 0, 0.0 66,-0.0 0.000 360.0 360.0 360.0-124.4 4.5 11.4 -7.6 2 -4 A E + 0 0 174 1,-0.0 2,-0.3 2,-0.0 0, 0.0 -0.249 360.0 78.3-150.8 27.3 0.9 11.6 -6.4 3 -3 A F - 0 0 14 93,-0.0 2,-0.3 94,-0.0 64,-0.1 -0.962 62.4-171.5-142.1 131.9 1.5 15.2 -5.5 4 -2 A K - 0 0 155 -2,-0.3 97,-0.1 -3,-0.1 2,-0.0 -0.938 31.7 -92.1-135.2 152.0 1.7 18.1 -8.1 5 -1 A A + 0 0 76 -2,-0.3 93,-0.2 1,-0.1 2,-0.1 -0.262 44.5 170.4 -63.8 150.7 2.7 21.7 -7.7 6 1 A G - 0 0 37 91,-0.6 2,-0.8 92,-0.2 -1,-0.1 -0.180 47.8 -38.3-131.8-146.2 0.2 24.4 -6.9 7 2 A S > - 0 0 49 1,-0.2 4,-2.5 -2,-0.1 95,-0.2 -0.824 37.4-166.2 -97.3 115.6 0.3 28.0 -5.9 8 3 A A H > S+ 0 0 36 -2,-0.8 4,-2.1 1,-0.2 -1,-0.2 0.786 94.2 52.5 -67.7 -35.0 3.1 28.9 -3.5 9 4 A K H > S+ 0 0 173 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.896 111.2 45.3 -68.1 -47.8 1.4 32.3 -2.9 10 5 A K H > S+ 0 0 104 1,-0.2 4,-1.6 2,-0.2 3,-0.3 0.901 112.6 53.2 -57.8 -39.9 -1.8 30.5 -2.0 11 6 A G H X S+ 0 0 0 -4,-2.5 4,-2.5 87,-0.3 -2,-0.2 0.861 102.7 58.2 -62.6 -37.7 0.3 28.1 0.1 12 7 A A H X S+ 0 0 19 -4,-2.1 4,-2.1 1,-0.2 -1,-0.2 0.825 108.8 44.1 -63.3 -43.9 1.9 31.0 2.0 13 8 A T H X S+ 0 0 74 -4,-1.3 4,-2.3 -3,-0.3 -1,-0.2 0.712 110.1 55.2 -76.6 -25.5 -1.5 32.2 3.2 14 9 A L H X>S+ 0 0 20 -4,-1.6 4,-2.1 2,-0.2 5,-0.5 0.913 108.9 48.9 -67.0 -48.2 -2.5 28.7 4.0 15 10 A F H X>S+ 0 0 5 -4,-2.5 4,-2.6 2,-0.2 5,-2.1 0.974 111.2 50.0 -52.5 -51.4 0.7 28.5 6.2 16 11 A K H <5S+ 0 0 129 -4,-2.1 5,-0.3 1,-0.3 4,-0.3 0.963 117.8 37.2 -58.7 -50.7 -0.2 31.8 7.9 17 12 A T H <5S+ 0 0 112 -4,-2.3 -1,-0.3 1,-0.1 -2,-0.2 0.706 131.9 23.9 -75.8 -25.4 -3.7 30.9 8.7 18 13 A R H <5S+ 0 0 110 -4,-2.1 -3,-0.2 -3,-0.3 -2,-0.2 0.663 131.9 21.6-116.6 -23.1 -3.2 27.2 9.6 19 14 A C T >X S- 0 0 97 1,-0.1 3,-2.1 12,-0.1 12,-0.3 -0.262 79.5-102.6 -72.4 149.5 12.8 30.5 8.3 27 22 A K T 3 S+ 0 0 170 1,-0.3 -1,-0.1 10,-0.1 -2,-0.1 -0.499 116.1 20.9 -66.0 127.1 16.4 29.5 8.8 28 23 A G T 3 S+ 0 0 82 1,-0.3 -1,-0.3 -2,-0.2 -2,-0.1 0.655 94.6 139.0 85.4 7.2 17.3 30.7 12.3 29 24 A G < - 0 0 14 -3,-2.1 -1,-0.3 1,-0.1 7,-0.2 -0.612 51.8-113.4 -81.1 148.0 13.6 30.8 13.2 30 25 A P - 0 0 78 0, 0.0 -6,-0.3 0, 0.0 2,-0.2 -0.402 19.6-105.3 -84.3 161.2 12.7 29.6 16.6 31 26 A H + 0 0 65 -2,-0.2 -8,-0.1 4,-0.1 2,-0.1 -0.621 43.3 168.9 -69.3 146.7 10.8 26.6 17.9 32 27 A K - 0 0 90 2,-3.5 -10,-0.1 -10,-0.6 -9,-0.1 -0.054 69.0 -37.0-123.4-127.6 7.4 27.6 19.3 33 28 A V S S+ 0 0 103 -12,-0.3 -10,-0.1 -2,-0.1 -11,-0.1 0.926 142.2 32.6 -57.2 -49.3 4.6 25.1 20.2 34 29 A G S S- 0 0 6 -12,-2.7 -2,-3.5 1,-0.1 -10,-0.2 -0.701 104.5 -89.4-103.4 164.6 6.0 23.2 17.2 35 30 A P - 0 0 14 0, 0.0 -11,-0.2 0, 0.0 -4,-0.1 -0.387 44.0 -96.7 -73.9 151.9 9.5 23.0 15.9 36 31 A N - 0 0 18 -7,-0.2 -11,-0.2 -13,-0.2 -5,-0.1 -0.415 34.8-151.3 -58.4 137.4 11.0 25.3 13.3 37 32 A L > + 0 0 27 -13,-2.5 3,-2.1 -2,-0.1 4,-0.3 0.374 43.9 135.5-100.9 7.8 10.6 23.6 10.0 38 33 A H T 3 S+ 0 0 32 -12,-0.3 70,-0.1 1,-0.3 69,-0.1 -0.319 81.0 11.4 -55.0 138.6 13.6 24.9 8.0 39 34 A G T 3 S+ 0 0 31 68,-2.5 -1,-0.3 -14,-0.2 4,-0.2 0.556 83.0 138.6 67.8 18.0 15.2 22.0 6.2 40 35 A I X + 0 0 11 -3,-2.1 3,-1.7 2,-0.1 24,-0.3 0.812 43.6 92.6 -61.1 -37.2 12.4 19.5 6.9 41 36 A F T 3 S+ 0 0 47 -4,-0.3 24,-0.2 1,-0.3 3,-0.1 -0.474 99.8 9.1 -65.5 126.5 12.5 18.1 3.4 42 37 A G T 3 S+ 0 0 50 22,-3.5 -1,-0.3 1,-0.3 2,-0.2 0.282 106.3 106.6 87.1 -11.1 14.8 15.0 3.3 43 38 A R S < S- 0 0 65 -3,-1.7 21,-2.5 21,-0.2 -1,-0.3 -0.596 71.8-115.4 -95.1 157.3 15.2 14.9 7.1 44 39 A H B > -A 63 0A 74 19,-0.2 3,-0.7 -2,-0.2 19,-0.2 -0.588 40.5 -86.8 -90.7 161.7 13.6 12.3 9.2 45 40 A S T 3 S+ 0 0 0 17,-1.5 -1,-0.1 -2,-0.2 16,-0.1 -0.285 107.1 28.3 -65.2 146.6 11.0 13.1 11.8 46 41 A G T 3 S+ 0 0 15 -3,-0.1 -1,-0.2 1,-0.1 7,-0.1 0.679 86.9 107.5 77.8 25.2 12.2 14.0 15.4 47 42 A Q < + 0 0 121 -3,-0.7 2,-0.4 2,-0.1 -2,-0.1 0.363 32.6 113.2-120.9 -1.8 15.6 15.5 14.5 48 43 A A S > S- 0 0 15 1,-0.0 3,-1.1 -5,-0.0 2,-0.1 -0.585 71.2-120.2 -66.5 130.0 15.4 19.3 15.0 49 44 A E T 3 S+ 0 0 185 -2,-0.4 3,-0.1 1,-0.2 -2,-0.1 -0.498 88.8 26.0 -82.3 145.3 17.7 20.0 17.9 50 45 A G T 3 S+ 0 0 78 1,-0.2 2,-0.4 -2,-0.1 -1,-0.2 0.582 94.3 113.8 87.9 8.6 16.4 21.7 21.1 51 46 A Y < - 0 0 43 -3,-1.1 2,-1.4 -5,-0.1 -1,-0.2 -0.951 63.1-136.3-118.0 136.7 12.8 20.4 20.6 52 47 A S - 0 0 94 -2,-0.4 2,-0.1 -3,-0.1 -3,-0.1 -0.555 30.7-175.2 -91.3 84.9 11.0 18.0 22.8 53 48 A Y - 0 0 34 -2,-1.4 30,-0.0 -7,-0.1 -19,-0.0 -0.510 29.4-101.3 -70.2 161.8 9.2 15.7 20.4 54 49 A T > - 0 0 30 -2,-0.1 4,-1.4 1,-0.1 5,-0.1 -0.259 29.9-113.2 -73.7 157.8 6.7 13.0 21.5 55 50 A D H > S+ 0 0 131 1,-0.2 4,-1.1 2,-0.2 5,-0.1 0.834 116.5 59.6 -56.5 -45.7 7.9 9.3 21.6 56 51 A A H > S+ 0 0 27 26,-0.3 4,-0.9 2,-0.2 -1,-0.2 0.753 103.0 47.2 -52.5 -48.2 5.5 8.7 18.7 57 52 A N H >> S+ 0 0 14 25,-0.2 4,-1.0 1,-0.2 3,-0.6 0.957 112.4 48.9 -66.4 -48.0 7.0 11.1 16.2 58 53 A I H 3< S+ 0 0 77 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.801 113.2 44.4 -57.0 -42.0 10.6 10.0 16.7 59 54 A K H 3< S+ 0 0 173 -4,-1.1 -1,-0.2 1,-0.2 -2,-0.2 0.516 100.7 68.7 -84.5 -15.2 10.0 6.3 16.4 60 55 A K H << S- 0 0 77 -4,-0.9 -2,-0.2 -3,-0.6 -1,-0.2 0.802 84.0-166.9 -74.2 -28.3 7.8 6.8 13.4 61 56 A N < - 0 0 82 -4,-1.0 2,-0.1 1,-0.2 -3,-0.1 0.766 10.4-174.7 41.5 46.2 11.0 7.9 11.7 62 57 A V - 0 0 7 -5,-0.4 -17,-1.5 -18,-0.1 2,-0.8 -0.339 24.1-137.7 -66.5 136.6 9.3 9.4 8.6 63 58 A L B -A 44 0A 68 -19,-0.2 2,-0.8 -2,-0.1 -19,-0.2 -0.844 28.1-131.4 -92.9 119.3 11.5 10.6 5.8 64 59 A W + 0 0 9 -21,-2.5 -22,-3.5 -2,-0.8 2,-0.3 -0.608 42.4 153.7 -82.0 113.6 9.8 13.9 4.9 65 60 A D >> - 0 0 57 -2,-0.8 4,-2.1 -24,-0.2 3,-0.7 -0.814 62.2 -97.5-129.7 158.3 9.2 14.2 1.1 66 61 A E H 3> S+ 0 0 62 -2,-0.3 4,-1.1 1,-0.2 34,-0.1 0.806 125.3 52.9 -49.8 -24.2 6.5 16.3 -0.5 67 62 A N H 3> S+ 0 0 48 2,-0.2 4,-1.1 1,-0.1 -1,-0.2 0.883 107.9 42.7 -81.7 -43.3 4.5 13.1 -0.7 68 63 A N H <> S+ 0 0 32 -3,-0.7 4,-3.2 2,-0.2 5,-0.2 0.856 111.3 60.4 -64.6 -44.7 4.6 11.8 2.9 69 64 A M H X S+ 0 0 13 -4,-2.1 4,-2.6 1,-0.2 -2,-0.2 0.878 100.7 53.3 -56.2 -39.8 3.9 15.3 4.0 70 65 A S H X S+ 0 0 10 -4,-1.1 4,-1.1 -5,-0.2 -1,-0.2 0.911 111.1 44.1 -66.0 -41.6 0.6 15.2 2.0 71 66 A E H X S+ 0 0 111 -4,-1.1 4,-0.7 2,-0.2 -2,-0.2 0.900 113.8 52.3 -71.7 -40.5 -0.6 12.1 3.7 72 67 A Y H >< S+ 0 0 18 -4,-3.2 3,-1.6 1,-0.2 7,-0.3 0.965 107.7 51.1 -55.3 -56.5 0.5 13.5 7.1 73 68 A L H 3< S+ 0 0 11 -4,-2.6 17,-2.7 1,-0.3 -1,-0.2 0.820 98.7 67.2 -60.1 -18.6 -1.4 16.8 6.5 74 69 A T H 3< S- 0 0 41 -4,-1.1 -1,-0.3 1,-0.3 -2,-0.2 0.877 132.1 -15.2 -65.6 -37.3 -4.5 14.9 5.7 75 70 A N XX - 0 0 61 -3,-1.6 4,-2.2 -4,-0.7 3,-0.5 -0.444 63.8-167.4-175.0 87.4 -4.7 13.6 9.3 76 71 A P H 3> S+ 0 0 0 0, 0.0 4,-2.9 0, 0.0 12,-0.1 0.838 89.3 47.4 -48.8 -50.4 -1.7 14.0 11.4 77 72 A X H 34 S+ 0 0 144 10,-0.4 6,-0.1 1,-0.2 5,-0.1 0.715 109.6 53.0 -70.0 -23.5 -2.9 11.7 14.3 78 73 A K H <4 S+ 0 0 174 -3,-0.5 -1,-0.2 -6,-0.2 -6,-0.1 0.938 116.5 41.4 -76.6 -41.2 -4.0 9.0 11.8 79 74 A Y H < S+ 0 0 56 -4,-2.2 -2,-0.2 -7,-0.3 -1,-0.1 0.823 131.8 22.3 -72.1 -44.8 -0.5 9.1 10.3 80 75 A I S >< S- 0 0 1 -4,-2.9 3,-2.3 -5,-0.2 -1,-0.2 -0.800 83.8-153.2-125.9 84.5 1.5 9.4 13.7 81 76 A P T 3 S+ 0 0 96 0, 0.0 -3,-0.1 0, 0.0 3,-0.1 -0.495 83.0 26.2 -66.3 128.8 -0.8 8.1 16.3 82 77 A G T 3 S+ 0 0 51 1,-0.3 -26,-0.3 -2,-0.2 -25,-0.2 0.396 83.8 144.7 99.6 -1.5 0.2 9.8 19.6 83 78 A T < - 0 0 7 -3,-2.3 -1,-0.3 -27,-0.2 -3,-0.0 -0.515 48.1-142.4 -67.2 147.0 1.6 13.0 18.0 84 79 A K + 0 0 106 -3,-0.1 2,-0.8 2,-0.1 -1,-0.1 0.284 64.2 120.6 -93.0 7.9 1.0 16.0 20.1 85 80 A M - 0 0 43 1,-0.1 2,-1.3 2,-0.1 -8,-0.1 -0.713 55.2-154.1 -72.5 106.3 0.4 18.1 17.0 86 81 A A + 0 0 89 -2,-0.8 2,-0.4 -10,-0.1 -1,-0.1 -0.609 47.9 122.7 -85.8 74.1 -3.1 19.3 17.6 87 82 A F - 0 0 36 -2,-1.3 -10,-0.4 1,-0.1 3,-0.1 -0.996 51.9-149.9-137.4 124.2 -4.2 19.9 14.0 88 83 A G - 0 0 59 -2,-0.4 2,-0.2 1,-0.2 -1,-0.1 0.821 50.2-103.8 -63.8 -42.4 -7.2 18.2 12.5 89 84 A G - 0 0 9 -14,-0.2 2,-0.6 -13,-0.1 -15,-0.3 -0.451 14.5 -95.7 134.6 163.2 -6.0 18.0 8.9 90 85 A L - 0 0 4 -17,-2.7 6,-0.1 -20,-0.2 -15,-0.1 -0.959 35.1-175.0-119.6 97.3 -6.3 19.5 5.4 91 86 A K + 0 0 114 -2,-0.6 2,-0.4 4,-0.1 -1,-0.1 0.737 56.8 82.4 -72.6 -28.5 -8.7 17.3 3.5 92 87 A K > - 0 0 127 1,-0.1 4,-2.1 4,-0.0 3,-0.3 -0.657 66.9-149.5 -87.2 126.5 -8.5 18.9 0.1 93 88 A E H > S+ 0 0 99 -2,-0.4 4,-2.8 1,-0.2 -1,-0.1 0.838 97.9 59.8 -55.8 -36.7 -5.7 17.7 -2.0 94 89 A K H > S+ 0 0 147 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.899 105.9 47.8 -64.4 -37.2 -5.6 21.1 -3.7 95 90 A D H > S+ 0 0 36 -3,-0.3 4,-2.9 2,-0.2 -1,-0.2 0.899 112.4 48.6 -64.1 -49.9 -5.0 22.9 -0.4 96 91 A R H X S+ 0 0 30 -4,-2.1 4,-3.1 2,-0.2 5,-0.3 0.909 110.4 51.7 -57.4 -43.7 -2.3 20.4 0.5 97 92 A N H X S+ 0 0 18 -4,-2.8 4,-1.8 1,-0.2 -91,-0.6 0.899 111.7 47.2 -62.6 -46.9 -0.6 20.9 -3.0 98 93 A D H X S+ 0 0 19 -4,-2.2 4,-1.6 2,-0.2 -87,-0.3 0.923 115.2 45.0 -53.6 -55.5 -0.7 24.6 -2.5 99 94 A L H X S+ 0 0 1 -4,-2.9 4,-3.2 1,-0.2 3,-0.4 0.936 114.0 47.2 -60.8 -47.4 0.8 24.4 1.1 100 95 A I H X S+ 0 0 0 -4,-3.1 4,-3.7 1,-0.3 5,-0.3 0.854 107.1 58.5 -62.3 -34.2 3.5 21.9 0.3 101 96 A T H X S+ 0 0 7 -4,-1.8 4,-1.0 -5,-0.3 -1,-0.3 0.911 111.1 42.7 -58.5 -46.0 4.4 24.0 -2.8 102 97 A Y H X S+ 0 0 48 -4,-1.6 4,-3.0 -3,-0.4 5,-0.3 0.923 115.0 49.3 -68.1 -42.5 5.1 26.9 -0.3 103 98 A L H X S+ 0 0 6 -4,-3.2 4,-2.8 1,-0.2 -2,-0.2 0.918 105.0 57.0 -66.6 -45.8 6.8 24.7 2.1 104 99 A K H < S+ 0 0 77 -4,-3.7 -1,-0.2 1,-0.2 -2,-0.2 0.847 117.0 37.8 -45.4 -45.2 9.1 23.1 -0.5 105 100 A K H < S+ 0 0 136 -4,-1.0 3,-0.4 -5,-0.3 -1,-0.2 0.896 118.3 43.2 -75.1 -45.7 10.2 26.7 -1.3 106 101 A A H < S+ 0 0 28 -4,-3.0 -2,-0.2 1,-0.2 -3,-0.2 0.707 109.4 56.6 -82.7 -21.4 10.4 28.4 2.1 107 102 A C < 0 0 1 -4,-2.8 -68,-2.5 -5,-0.3 -1,-0.2 0.394 360.0 360.0 -89.1 4.6 12.1 25.5 3.9 108 103 A E 0 0 183 -3,-0.4 -1,-0.2 -5,-0.2 -2,-0.1 0.839 360.0 360.0 -89.4 360.0 15.1 25.2 1.7