==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER COMPLEX (ONCOGENE PROTEIN/PEPTIDE) 30-SEP-96 1YCQ . COMPND 2 MOLECULE: MDM2; . SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; . AUTHOR P.H.KUSSIE,N.P.PAVLETICH . 99 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5817.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 69 69.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 12.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 34 34.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 1 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 21 A E 0 0 164 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 177.8 57.2 4.1 24.7 2 22 A K - 0 0 128 1,-0.1 24,-0.4 84,-0.1 2,-0.3 -0.260 360.0-123.2 -65.6 151.3 53.5 4.7 25.4 3 23 A L - 0 0 65 22,-0.1 85,-1.3 23,-0.1 2,-0.4 -0.770 23.3-161.6 -98.7 145.4 52.0 8.0 24.3 4 24 A V B -A 24 0A 6 20,-2.5 20,-1.6 -2,-0.3 82,-0.2 -0.941 11.7-142.3-125.3 148.2 50.3 10.4 26.7 5 25 A Q E -B 85 0B 79 80,-2.9 79,-2.5 -2,-0.4 80,-1.1 -0.929 19.6-146.7-114.9 105.9 47.9 13.2 25.9 6 26 A P E -B 83 0B 6 0, 0.0 77,-0.2 0, 0.0 74,-0.0 -0.281 24.0-103.5 -67.0 155.2 48.4 16.2 28.2 7 27 A T > - 0 0 33 75,-1.9 4,-2.8 1,-0.1 5,-0.2 -0.283 44.4 -92.8 -69.5 167.1 45.4 18.4 29.3 8 28 A P H > S+ 0 0 113 0, 0.0 4,-2.2 0, 0.0 5,-0.1 0.874 125.0 47.7 -51.4 -42.4 45.0 21.8 27.5 9 29 A L H > S+ 0 0 62 2,-0.2 4,-1.5 1,-0.2 5,-0.1 0.930 113.1 45.3 -66.0 -50.9 47.0 23.7 30.1 10 30 A L H > S+ 0 0 0 1,-0.2 4,-2.2 2,-0.2 3,-0.2 0.913 112.5 55.0 -60.2 -38.1 50.0 21.3 30.3 11 31 A L H X S+ 0 0 20 -4,-2.8 4,-2.7 1,-0.2 -2,-0.2 0.927 104.5 52.6 -61.4 -44.5 49.9 21.3 26.5 12 32 A S H X S+ 0 0 60 -4,-2.2 4,-1.8 1,-0.2 -1,-0.2 0.834 109.1 49.5 -64.0 -30.1 50.2 25.1 26.3 13 33 A L H X S+ 0 0 5 -4,-1.5 4,-0.9 -3,-0.2 -1,-0.2 0.938 112.0 46.7 -72.9 -46.9 53.2 25.1 28.5 14 34 A L H ><>S+ 0 0 0 -4,-2.2 5,-2.1 1,-0.2 3,-1.1 0.948 112.4 51.4 -58.5 -46.5 55.0 22.4 26.5 15 35 A K H ><5S+ 0 0 74 -4,-2.7 3,-1.8 1,-0.3 -1,-0.2 0.889 107.7 51.6 -58.1 -42.7 54.1 24.2 23.3 16 36 A S H 3<5S+ 0 0 85 -4,-1.8 -1,-0.3 1,-0.3 -2,-0.2 0.690 105.0 57.9 -69.5 -17.4 55.5 27.5 24.6 17 37 A A T <<5S- 0 0 24 -3,-1.1 -1,-0.3 -4,-0.9 -2,-0.2 0.234 133.8 -89.4 -93.4 11.5 58.7 25.6 25.4 18 38 A G T < 5S+ 0 0 56 -3,-1.8 -3,-0.2 1,-0.3 -2,-0.1 0.457 76.6 146.9 100.9 -2.6 59.0 24.6 21.8 19 39 A A < - 0 0 7 -5,-2.1 -1,-0.3 -6,-0.1 -2,-0.0 -0.390 25.6-171.7 -65.5 146.8 57.0 21.3 21.5 20 40 A Q + 0 0 182 -2,-0.1 -1,-0.1 0, 0.0 2,-0.1 0.527 56.5 73.6-117.6 -8.0 55.3 20.8 18.2 21 41 A K - 0 0 82 1,-0.1 3,-0.1 2,-0.0 -6,-0.0 -0.182 62.7-145.4 -96.8-173.0 53.1 17.7 18.9 22 42 A E S S+ 0 0 103 1,-0.3 2,-0.4 -2,-0.1 -1,-0.1 0.333 90.8 49.8-129.2 -10.1 50.0 17.1 20.8 23 43 A T + 0 0 36 -18,-0.1 -1,-0.3 -20,-0.0 2,-0.3 -0.991 68.7 162.3-133.8 134.5 51.0 13.6 21.9 24 44 A F B -A 4 0A 0 -20,-1.6 -20,-2.5 -2,-0.4 2,-0.2 -0.889 39.0-105.2-143.1 173.7 54.4 12.7 23.5 25 45 A T >> - 0 0 21 -2,-0.3 4,-1.9 -22,-0.2 3,-0.6 -0.578 45.4-103.2 -94.9 167.3 56.2 10.1 25.4 26 46 A M H 3> S+ 0 0 56 -24,-0.4 4,-2.8 1,-0.2 5,-0.2 0.861 122.8 59.0 -60.7 -32.8 56.8 10.8 29.2 27 47 A K H 3> S+ 0 0 156 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.824 106.1 47.2 -64.6 -33.3 60.5 11.6 28.3 28 48 A E H <> S+ 0 0 59 -3,-0.6 4,-3.0 2,-0.2 -1,-0.2 0.874 110.7 51.8 -75.2 -39.2 59.4 14.3 25.9 29 49 A V H X S+ 0 0 0 -4,-1.9 4,-2.5 2,-0.2 -2,-0.2 0.965 113.7 44.7 -59.7 -48.0 57.0 15.8 28.5 30 50 A I H X S+ 0 0 21 -4,-2.8 4,-2.0 1,-0.2 -2,-0.2 0.919 113.6 50.3 -64.2 -41.6 59.8 15.8 31.0 31 51 A Y H X S+ 0 0 134 -4,-2.2 4,-1.4 1,-0.2 -1,-0.2 0.941 113.0 45.1 -61.1 -49.8 62.3 17.3 28.5 32 52 A H H X S+ 0 0 26 -4,-3.0 4,-1.8 1,-0.2 -1,-0.2 0.858 109.5 55.7 -64.8 -34.4 59.9 20.0 27.5 33 53 A L H X S+ 0 0 0 -4,-2.5 4,-2.4 1,-0.2 5,-0.2 0.906 105.1 52.1 -66.4 -38.6 59.0 20.9 31.1 34 54 A G H X S+ 0 0 2 -4,-2.0 4,-2.2 1,-0.2 -1,-0.2 0.890 109.1 51.3 -64.4 -35.6 62.7 21.4 32.0 35 55 A Q H X S+ 0 0 78 -4,-1.4 4,-3.2 2,-0.2 -1,-0.2 0.876 108.7 50.8 -67.5 -38.5 63.0 23.8 29.1 36 56 A Y H X S+ 0 0 5 -4,-1.8 4,-2.1 2,-0.2 -2,-0.2 0.936 112.9 45.3 -63.6 -46.7 59.9 25.7 30.3 37 57 A I H X>S+ 0 0 0 -4,-2.4 5,-2.0 2,-0.2 4,-0.8 0.876 115.5 48.5 -65.0 -37.0 61.3 26.0 33.8 38 58 A M H <5S+ 0 0 46 -4,-2.2 3,-0.4 -5,-0.2 -2,-0.2 0.942 112.2 46.7 -66.6 -51.9 64.7 27.0 32.3 39 59 A A H <5S+ 0 0 86 -4,-3.2 -2,-0.2 1,-0.2 -1,-0.2 0.819 118.6 41.0 -61.8 -38.0 63.3 29.6 29.9 40 60 A K H <5S- 0 0 101 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.576 103.2-134.3 -86.1 -13.3 61.1 31.2 32.6 41 61 A Q T <5 + 0 0 118 -4,-0.8 -3,-0.2 -3,-0.4 -4,-0.1 0.937 49.8 152.6 58.0 51.7 63.9 30.9 35.2 42 62 A L < + 0 0 23 -5,-2.0 10,-3.1 -6,-0.1 -4,-0.1 0.627 40.1 95.6 -84.9 -16.4 61.5 29.5 37.8 43 63 A Y B S-C 51 0C 36 -6,-0.5 2,-0.3 8,-0.3 8,-0.3 -0.381 87.0 -92.7 -75.6 157.4 64.3 27.6 39.7 44 64 A D - 0 0 35 6,-2.7 6,-0.1 3,-0.6 48,-0.1 -0.535 21.4-138.5 -76.8 131.4 66.1 29.0 42.7 45 65 A E S S+ 0 0 139 -2,-0.3 3,-0.2 1,-0.2 -1,-0.1 0.860 101.7 23.6 -50.2 -46.2 69.3 30.9 42.1 46 66 A K S S+ 0 0 152 1,-0.3 2,-1.0 2,-0.0 -1,-0.2 0.896 130.2 38.2 -91.4 -54.1 71.0 29.3 45.1 47 67 A Q S > S- 0 0 110 1,-0.1 3,-1.8 3,-0.1 -3,-0.6 -0.806 73.2-175.5-101.8 88.3 69.2 26.0 45.7 48 68 A Q T 3 S+ 0 0 39 -2,-1.0 -1,-0.1 42,-0.4 47,-0.1 0.384 72.6 69.4 -70.2 3.9 68.6 25.0 42.1 49 69 A H T 3 S+ 0 0 22 -6,-0.1 20,-3.1 19,-0.1 2,-0.5 0.592 84.4 85.4 -94.7 -9.9 66.6 22.0 42.9 50 70 A I E < - D 0 68C 33 -3,-1.8 -6,-2.7 18,-0.2 2,-0.5 -0.789 63.1-162.8 -96.2 126.5 63.7 24.2 44.1 51 71 A V E -CD 43 67C 0 16,-3.1 16,-1.6 -2,-0.5 2,-0.6 -0.946 5.6-153.7-110.8 123.7 61.3 25.5 41.5 52 72 A H E + D 0 66C 64 -10,-3.1 14,-0.3 -2,-0.5 3,-0.1 -0.881 26.4 158.8 -99.5 117.2 59.1 28.4 42.5 53 73 A C > + 0 0 0 12,-1.7 3,-1.6 -2,-0.6 6,-0.7 0.162 28.3 123.3-125.8 25.3 55.8 28.6 40.6 54 74 A S T 3 S+ 0 0 61 11,-1.0 -1,-0.1 1,-0.3 12,-0.1 0.743 87.9 27.6 -56.1 -33.8 53.6 30.7 42.8 55 75 A N T 3 S+ 0 0 168 -3,-0.1 -1,-0.3 10,-0.1 10,-0.1 -0.106 108.4 85.9-122.6 37.0 52.9 33.3 40.1 56 76 A D S X> S- 0 0 11 -3,-1.6 3,-2.1 1,-0.1 4,-0.9 -0.954 86.5-112.5-135.2 151.6 53.2 31.2 37.0 57 77 A P H 3> S+ 0 0 50 0, 0.0 4,-3.0 0, 0.0 3,-0.2 0.785 114.5 69.1 -56.2 -26.7 50.7 28.9 35.2 58 78 A L H 3> S+ 0 0 0 1,-0.3 4,-2.7 2,-0.2 5,-0.3 0.843 97.7 51.9 -59.7 -31.5 52.9 25.9 36.3 59 79 A G H <>>S+ 0 0 5 -3,-2.1 4,-2.1 -6,-0.7 5,-0.5 0.830 109.7 47.9 -72.6 -33.9 51.7 26.7 39.8 60 80 A E H <5S+ 0 0 146 -4,-0.9 -2,-0.2 -3,-0.2 -1,-0.2 0.914 114.2 48.1 -71.4 -40.3 48.1 26.7 38.6 61 81 A L H <5S+ 0 0 11 -4,-3.0 -2,-0.2 1,-0.2 -3,-0.2 0.951 123.9 28.8 -64.5 -53.8 48.7 23.4 36.8 62 82 A F H <5S- 0 0 4 -4,-2.7 -2,-0.2 -5,-0.2 -3,-0.2 0.814 98.6-134.4 -78.4 -31.2 50.4 21.6 39.7 63 83 A G T <5 + 0 0 61 -4,-2.1 2,-0.3 -5,-0.3 -3,-0.2 0.821 66.0 108.5 79.6 32.9 48.6 23.5 42.4 64 84 A V < - 0 0 25 -5,-0.5 -1,-0.3 -6,-0.2 -2,-0.1 -0.850 69.7-133.7-133.7 167.2 51.7 24.2 44.5 65 85 A Q S S- 0 0 141 1,-0.4 -12,-1.7 -2,-0.3 -11,-1.0 0.672 87.3 -21.6 -92.1 -26.0 53.9 27.2 45.3 66 86 A E E -D 52 0C 85 -14,-0.3 -1,-0.4 -13,-0.2 2,-0.3 -0.972 58.2-160.5-168.8 172.1 57.0 25.3 44.7 67 87 A F E -D 51 0C 12 -16,-1.6 -16,-3.1 -2,-0.3 2,-0.4 -0.965 21.8-116.2-159.9 164.7 58.6 21.9 44.4 68 88 A S E > -D 50 0C 16 -2,-0.3 3,-1.7 -18,-0.2 -18,-0.2 -0.946 8.3-147.2-110.6 133.3 61.9 20.1 44.5 69 89 A V T 3 S+ 0 0 6 -20,-3.1 -19,-0.1 -2,-0.4 -1,-0.1 0.644 99.7 73.9 -72.1 -7.4 63.3 18.2 41.6 70 90 A K T 3 S+ 0 0 113 -21,-0.3 -1,-0.3 1,-0.2 3,-0.1 0.313 84.4 66.7 -86.0 9.3 64.8 16.1 44.3 71 91 A E <> + 0 0 114 -3,-1.7 4,-1.6 1,-0.1 3,-0.4 -0.604 61.6 170.0-128.0 70.6 61.4 14.6 45.0 72 92 A P H > S+ 0 0 29 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.811 70.8 59.7 -50.9 -40.5 60.7 12.6 41.8 73 93 A R H > S+ 0 0 195 1,-0.2 4,-1.7 2,-0.2 5,-0.1 0.928 105.5 44.5 -60.7 -49.8 57.6 10.8 43.1 74 94 A R H > S+ 0 0 95 -3,-0.4 4,-1.7 1,-0.2 -1,-0.2 0.889 112.6 54.8 -63.4 -36.8 55.5 13.9 43.9 75 95 A L H X S+ 0 0 1 -4,-1.6 4,-2.0 1,-0.2 3,-0.4 0.954 106.4 48.7 -61.0 -52.3 56.5 15.4 40.5 76 96 A Y H X S+ 0 0 59 -4,-2.4 4,-2.8 1,-0.2 -1,-0.2 0.866 109.1 54.8 -58.3 -32.7 55.4 12.4 38.5 77 97 A A H X S+ 0 0 43 -4,-1.7 4,-2.0 1,-0.2 -1,-0.2 0.879 106.5 50.1 -68.8 -37.5 52.0 12.4 40.4 78 98 A M H < S+ 0 0 1 -4,-1.7 -1,-0.2 -3,-0.4 -2,-0.2 0.892 113.7 45.8 -68.1 -37.5 51.4 16.1 39.5 79 99 A I H >< S+ 0 0 0 -4,-2.0 3,-1.9 1,-0.2 -2,-0.2 0.949 110.9 54.0 -68.0 -47.8 52.1 15.3 35.8 80 100 A S H >< S+ 0 0 68 -4,-2.8 3,-1.5 1,-0.3 -2,-0.2 0.857 100.6 56.4 -57.5 -44.2 50.0 12.2 35.8 81 101 A R T 3< S+ 0 0 128 -4,-2.0 -1,-0.3 1,-0.3 -2,-0.2 0.532 106.6 57.8 -69.2 3.6 46.8 13.8 37.1 82 102 A N T < S+ 0 0 23 -3,-1.9 -75,-1.9 -5,-0.1 2,-0.5 0.056 81.7 92.3-120.5 26.6 47.3 16.1 34.1 83 103 A L E < -B 6 0B 22 -3,-1.5 3,-0.2 -77,-0.2 -4,-0.0 -0.983 57.3-159.1-117.8 117.9 47.2 13.5 31.2 84 104 A V E S+ 0 0 89 -79,-2.5 2,-0.3 -2,-0.5 -1,-0.1 0.831 90.4 16.2 -67.0 -24.1 43.8 12.9 29.8 85 105 A S E -B 5 0B 28 -80,-1.1 -80,-2.9 -3,-0.1 -1,-0.3 -0.943 56.6-168.4-150.8 120.6 45.2 9.6 28.5 86 106 A A S S+ 0 0 58 -2,-0.3 2,-0.3 1,-0.2 -82,-0.1 0.221 92.5 43.8 -89.1 11.9 48.4 7.9 29.7 87 107 A N 0 0 104 -85,-0.1 -1,-0.2 -82,-0.1 -83,-0.2 -0.808 360.0 360.0-158.5 102.1 48.0 5.6 26.7 88 108 A V 0 0 87 -85,-1.3 -84,-0.1 -2,-0.3 -2,-0.1 0.722 360.0 360.0-105.4 360.0 47.1 7.2 23.4 89 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 90 17 B E 0 0 137 0, 0.0 -42,-0.4 0, 0.0 2,-0.2 0.000 360.0 360.0 360.0 120.2 74.8 21.2 40.9 91 18 B T >> - 0 0 65 1,-0.1 4,-2.1 -44,-0.1 3,-0.6 -0.526 360.0-101.9 -93.3 163.4 72.7 23.3 38.5 92 19 B F H 3> S+ 0 0 2 1,-0.3 4,-3.3 2,-0.2 5,-0.3 0.899 122.4 53.3 -47.7 -50.7 69.1 22.9 37.6 93 20 B S H 3> S+ 0 0 53 1,-0.2 4,-2.0 2,-0.2 -1,-0.3 0.863 107.7 52.4 -55.0 -39.5 70.0 21.2 34.3 94 21 B D H <4 S+ 0 0 82 -3,-0.6 4,-0.5 2,-0.2 -1,-0.2 0.950 113.9 41.0 -62.7 -50.3 72.1 18.7 36.1 95 22 B L H >< S+ 0 0 18 -4,-2.1 3,-1.8 1,-0.2 -2,-0.2 0.927 112.9 53.3 -64.5 -47.6 69.4 17.7 38.6 96 23 B W H >< S+ 0 0 23 -4,-3.3 3,-1.5 1,-0.3 -1,-0.2 0.884 105.0 56.5 -55.1 -39.1 66.6 17.7 35.9 97 24 B K T 3< S+ 0 0 165 -4,-2.0 -1,-0.3 -5,-0.3 -2,-0.2 0.649 102.2 57.9 -66.9 -16.9 68.7 15.4 33.8 98 25 B L T < S+ 0 0 119 -3,-1.8 -1,-0.3 -4,-0.5 -2,-0.2 0.233 72.7 148.6 -98.7 13.1 68.8 13.0 36.8 99 26 B L < 0 0 30 -3,-1.5 -29,-0.1 1,-0.1 -3,-0.1 -0.323 360.0 360.0 -60.6 110.6 65.1 12.5 37.1 100 27 B P 0 0 112 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.716 360.0 360.0 -96.0 360.0 64.2 9.0 38.4