==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 29-OCT-91 1YEA . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR M.E.P.MURPHY,G.D.BRAYER . 112 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6649.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 56.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 10.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 33.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -9 A A > 0 0 67 0, 0.0 4,-3.4 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 80.7 1.9 6.0 -0.5 2 -8 A K H > + 0 0 111 2,-0.2 4,-4.3 1,-0.2 5,-0.4 0.915 360.0 49.4 -54.0 -54.3 3.8 8.5 -2.6 3 -7 A E H 4 S+ 0 0 181 2,-0.2 -1,-0.2 1,-0.2 0, 0.0 0.951 112.5 48.7 -53.6 -49.7 2.6 7.1 -5.9 4 -6 A S H 4 S+ 0 0 105 1,-0.2 -2,-0.2 2,-0.1 -1,-0.2 0.933 113.2 47.9 -51.8 -53.3 -0.9 7.1 -4.5 5 -5 A T H < S+ 0 0 31 -4,-3.4 -2,-0.2 1,-0.1 -1,-0.2 0.977 76.2 179.9 -53.3 -61.4 -0.3 10.7 -3.5 6 -4 A G < - 0 0 49 -4,-4.3 -3,-0.1 1,-0.2 -1,-0.1 0.822 26.7-151.0 57.3 33.8 1.1 11.6 -6.9 7 -3 A F - 0 0 38 -5,-0.4 -1,-0.2 1,-0.1 64,-0.1 -0.048 9.7-154.9 -37.7 126.9 1.5 15.1 -5.4 8 -2 A K - 0 0 133 -3,-0.1 97,-0.1 1,-0.1 -1,-0.1 -0.874 23.0-102.0-109.9 142.0 1.2 17.8 -8.0 9 -1 A P + 0 0 101 0, 0.0 2,-0.2 0, 0.0 93,-0.2 -0.253 49.1 171.3 -62.8 146.4 2.8 21.2 -7.7 10 1 A G - 0 0 34 91,-0.5 2,-1.0 92,-0.2 3,-0.1 -0.514 41.0 -34.8-133.1-156.9 0.3 24.0 -6.8 11 2 A S > - 0 0 45 1,-0.2 4,-3.9 -2,-0.2 95,-0.3 -0.689 35.5-172.8 -85.7 107.0 0.1 27.6 -5.8 12 3 A A H > S+ 0 0 38 -2,-1.0 4,-3.4 2,-0.2 -1,-0.2 0.851 94.0 54.5 -61.5 -36.1 3.1 28.6 -3.7 13 4 A K H > S+ 0 0 179 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.987 112.8 42.3 -55.9 -57.1 1.2 32.0 -3.3 14 5 A K H > S+ 0 0 111 1,-0.3 4,-1.9 2,-0.2 -2,-0.2 0.873 113.1 52.6 -55.3 -44.7 -1.8 30.0 -2.1 15 6 A G H X S+ 0 0 0 -4,-3.9 4,-1.9 87,-0.3 3,-0.3 0.938 103.4 58.7 -60.8 -48.1 0.5 27.8 -0.0 16 7 A A H X S+ 0 0 34 -4,-3.4 4,-1.7 1,-0.3 3,-0.4 0.906 109.4 43.8 -47.1 -52.8 1.9 30.9 1.6 17 8 A T H X S+ 0 0 91 -4,-1.9 4,-1.9 1,-0.2 -1,-0.3 0.802 109.8 53.4 -68.0 -31.7 -1.5 31.9 2.8 18 9 A L H X S+ 0 0 30 -4,-1.9 4,-0.7 -3,-0.3 -1,-0.2 0.813 106.5 56.0 -73.4 -26.0 -2.6 28.5 4.0 19 10 A F H X>S+ 0 0 12 -4,-1.9 4,-3.4 -3,-0.4 5,-1.9 0.915 109.8 45.1 -65.8 -47.9 0.6 28.4 6.1 20 11 A K H <5S+ 0 0 122 -4,-1.7 5,-0.2 1,-0.2 -2,-0.2 0.814 116.7 41.8 -65.0 -43.0 -0.2 31.6 7.9 21 12 A T H <5S+ 0 0 96 -4,-1.9 -1,-0.2 1,-0.1 -2,-0.2 0.587 132.1 23.9 -81.9 -7.7 -3.9 30.9 8.6 22 13 A R H <5S+ 0 0 98 -4,-0.7 -2,-0.2 -3,-0.4 -3,-0.2 0.585 130.6 18.1-133.1 -21.5 -3.0 27.3 9.6 23 14 A C T >X5S+ 0 0 20 -4,-3.4 4,-2.0 4,-0.1 3,-0.5 0.469 102.9 78.3-127.8 -22.2 0.5 26.4 10.8 24 15 A Q T 34 S- 0 0 104 1,-0.1 3,-2.0 12,-0.1 12,-0.4 -0.227 80.2 -98.0 -55.6 143.6 12.3 30.6 8.3 31 22 A E T 3 S+ 0 0 147 1,-0.3 -1,-0.1 79,-0.2 -2,-0.1 -0.407 114.7 14.0 -59.4 131.3 16.0 29.5 8.5 32 23 A G T 3 S+ 0 0 64 1,-0.2 -1,-0.3 -3,-0.1 -2,-0.1 0.707 92.2 144.4 71.2 17.1 17.0 30.2 12.1 33 24 A G < - 0 0 15 -3,-2.0 -1,-0.2 1,-0.1 2,-0.2 -0.449 49.4-112.3 -79.6 165.2 13.4 30.7 13.3 34 25 A P - 0 0 76 0, 0.0 -6,-0.2 0, 0.0 -1,-0.1 -0.557 24.8 -98.7 -93.3 166.8 12.7 29.4 16.9 35 26 A N + 0 0 49 -2,-0.2 2,-0.2 4,-0.1 -8,-0.1 -0.275 47.9 164.2 -72.9 170.7 10.6 26.4 18.2 36 27 A K - 0 0 91 2,-2.2 -10,-0.1 -10,-0.3 -9,-0.1 -0.508 70.0 -32.6-158.1-137.6 7.2 27.6 19.4 37 28 A V S S+ 0 0 109 -12,-0.3 -10,-0.1 -2,-0.2 -11,-0.1 0.927 142.6 25.9 -59.4 -46.2 4.2 25.3 20.1 38 29 A G S S- 0 0 7 -12,-2.7 -2,-2.2 -15,-0.1 2,-0.1 -0.606 105.9 -89.2-106.1 169.9 5.5 23.2 17.2 39 30 A P - 0 0 15 0, 0.0 -11,-0.3 0, 0.0 2,-0.1 -0.405 47.4 -88.7 -84.4 156.8 9.1 23.0 16.0 40 31 A N - 0 0 13 -13,-0.2 -11,-0.2 -7,-0.1 -5,-0.1 -0.448 35.9-154.3 -62.6 135.6 10.7 25.3 13.4 41 32 A L > + 0 0 20 -13,-3.4 3,-2.6 -2,-0.1 -12,-0.2 0.563 48.4 126.3 -92.9 -7.1 10.2 23.7 10.0 42 33 A H T 3 S+ 0 0 37 -12,-0.4 70,-0.1 1,-0.3 69,-0.1 -0.202 84.3 17.6 -53.8 135.5 13.2 25.1 8.0 43 34 A G T > S+ 0 0 26 68,-2.5 3,-0.6 -14,-0.2 -1,-0.3 0.592 84.9 136.9 80.9 4.7 15.0 22.1 6.6 44 35 A I G X + 0 0 15 -3,-2.6 3,-1.9 1,-0.2 24,-0.4 0.936 65.4 54.6 -49.5 -55.8 12.0 19.8 7.1 45 36 A F G 3 S+ 0 0 41 1,-0.3 -1,-0.2 -4,-0.2 67,-0.1 0.805 105.5 53.5 -50.6 -33.3 12.2 18.1 3.7 46 37 A G G < S+ 0 0 78 -3,-0.6 -1,-0.3 21,-0.1 2,-0.3 0.035 107.8 65.6 -92.7 33.2 15.8 17.1 4.2 47 38 A R S < S- 0 0 46 -3,-1.9 21,-2.5 21,-0.4 2,-0.2 -0.927 72.8-115.5-153.0 165.2 15.0 15.4 7.5 48 39 A H B -A 67 0A 54 -2,-0.3 3,-0.5 19,-0.2 19,-0.3 -0.527 52.5 -82.0 -92.5 170.8 13.4 12.7 9.5 49 40 A S S S+ 0 0 1 17,-1.3 16,-0.1 1,-0.2 -1,-0.1 -0.441 106.7 22.5 -73.2 151.3 10.6 13.2 12.1 50 41 A G S S+ 0 0 12 -2,-0.1 -1,-0.2 15,-0.1 7,-0.1 0.797 85.6 105.6 64.8 45.7 11.8 14.3 15.6 51 42 A Q + 0 0 131 -3,-0.5 2,-0.2 2,-0.1 -2,-0.1 0.580 30.0 119.1-131.0 -8.5 15.2 15.8 15.2 52 43 A V S > S- 0 0 12 1,-0.1 3,-1.2 2,-0.1 2,-0.2 -0.490 70.5-116.0 -61.7 126.5 15.1 19.6 15.6 53 44 A K T 3 S+ 0 0 145 -2,-0.2 3,-0.1 1,-0.2 -1,-0.1 -0.444 91.5 20.5 -67.7 135.9 17.4 20.2 18.6 54 45 A G T 3 S+ 0 0 85 1,-0.3 2,-0.4 -2,-0.2 -1,-0.2 0.283 95.1 114.6 83.6 -0.0 15.9 21.7 21.7 55 46 A Y < - 0 0 40 -3,-1.2 2,-1.0 -15,-0.0 -1,-0.3 -0.809 62.8-136.0 -99.1 141.0 12.3 20.7 20.9 56 47 A S - 0 0 91 -2,-0.4 2,-0.2 -3,-0.1 -3,-0.1 -0.776 28.0-174.8-101.1 106.9 10.5 18.1 23.0 57 48 A Y - 0 0 40 -2,-1.0 2,-0.0 -7,-0.1 30,-0.0 -0.583 29.0-104.0 -93.7 163.1 8.7 15.6 20.8 58 49 A T > - 0 0 27 -2,-0.2 4,-1.9 1,-0.1 3,-0.2 -0.313 32.6-114.1 -72.6 159.8 6.3 12.8 21.8 59 50 A D H > S+ 0 0 121 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.791 115.4 67.5 -63.2 -30.5 7.8 9.3 21.7 60 51 A A H > S+ 0 0 25 2,-0.2 4,-0.9 26,-0.2 -1,-0.2 0.875 104.3 37.1 -55.4 -49.7 5.3 8.8 18.9 61 52 A N H > S+ 0 0 16 2,-0.2 4,-0.9 -3,-0.2 5,-0.5 0.860 117.4 51.4 -72.3 -45.4 6.9 11.2 16.4 62 53 A I H >< S+ 0 0 78 -4,-1.9 3,-1.0 1,-0.2 -2,-0.2 0.956 114.2 44.5 -55.4 -52.2 10.4 10.3 17.4 63 54 A N H 3< S+ 0 0 126 -4,-3.0 -1,-0.2 1,-0.2 -2,-0.2 0.688 101.1 68.9 -61.7 -27.8 9.6 6.6 17.0 64 55 A K H 3< S- 0 0 80 -4,-0.9 -1,-0.2 -5,-0.2 -2,-0.2 0.777 79.6-165.7 -67.2 -28.1 7.8 7.2 13.7 65 56 A N << - 0 0 89 -3,-1.0 2,-0.2 -4,-0.9 -3,-0.1 0.809 13.4-174.1 41.5 48.3 11.1 8.1 12.0 66 57 A V - 0 0 9 -5,-0.5 -17,-1.3 1,-0.1 2,-0.9 -0.509 25.0-143.2 -74.0 138.0 9.5 9.7 9.0 67 58 A K B -A 48 0A 149 -19,-0.3 2,-0.7 -2,-0.2 -19,-0.2 -0.907 30.3-133.4 -95.2 102.8 11.7 10.8 6.1 68 59 A W + 0 0 11 -21,-2.5 -21,-0.4 -2,-0.9 2,-0.2 -0.556 46.0 147.6 -69.5 112.3 9.8 14.0 5.3 69 60 A D > - 0 0 52 -2,-0.7 4,-1.6 -23,-0.1 5,-0.1 -0.517 63.4 -93.4-124.1-168.7 9.3 14.1 1.5 70 61 A E H > S+ 0 0 54 -2,-0.2 4,-1.1 2,-0.2 34,-0.1 0.760 125.1 51.6 -86.8 -22.7 6.2 15.6 -0.2 71 62 A D H > S+ 0 0 23 2,-0.2 4,-1.3 1,-0.1 -1,-0.2 0.869 112.5 48.0 -75.6 -37.2 4.3 12.4 -0.5 72 63 A S H > S+ 0 0 12 2,-0.2 4,-2.6 1,-0.2 3,-0.5 0.957 110.6 49.5 -60.7 -59.4 4.9 11.8 3.3 73 64 A M H X S+ 0 0 9 -4,-1.6 4,-2.4 1,-0.2 -1,-0.2 0.769 106.2 59.9 -54.1 -36.8 3.8 15.3 4.2 74 65 A S H X S+ 0 0 3 -4,-1.1 4,-0.7 2,-0.2 -1,-0.2 0.903 109.1 39.7 -65.8 -47.6 0.7 14.8 2.1 75 66 A E H >X S+ 0 0 69 -4,-1.3 3,-1.6 -3,-0.5 4,-1.4 0.949 115.1 54.0 -61.4 -57.4 -0.6 11.8 4.1 76 67 A Y H >< S+ 0 0 22 -4,-2.6 3,-0.7 1,-0.3 7,-0.3 0.850 106.8 52.1 -47.8 -42.7 0.5 13.4 7.4 77 68 A L H 3< S+ 0 0 16 -4,-2.4 17,-3.7 1,-0.3 -1,-0.3 0.684 100.9 58.6 -75.6 -17.7 -1.5 16.5 6.6 78 69 A T H << S- 0 0 40 -3,-1.6 -1,-0.3 -4,-0.7 -2,-0.2 0.740 136.4 -8.6 -74.6 -29.1 -4.8 14.7 5.8 79 70 A N S+ 0 0 2 0, 0.0 4,-4.4 0, 0.0 7,-0.2 0.946 91.9 48.0 -55.9 -45.8 -1.6 13.7 11.5 81 72 A X H 4 S+ 0 0 157 10,-0.3 6,-0.2 2,-0.2 11,-0.1 0.967 113.1 50.8 -63.3 -38.6 -2.9 11.7 14.4 82 73 A K H 4 S+ 0 0 165 1,-0.2 -1,-0.2 2,-0.2 -6,-0.1 0.939 116.2 39.3 -63.2 -43.4 -3.9 9.1 11.8 83 74 A Y H < S+ 0 0 34 -4,-3.7 -1,-0.2 -7,-0.3 -2,-0.2 0.901 133.4 26.1 -76.4 -32.7 -0.4 9.1 10.3 84 75 A I S >< S- 0 0 2 -4,-4.4 3,-2.3 -5,-0.2 -1,-0.3 -0.772 75.8-158.8-133.5 84.0 1.2 9.4 13.8 85 76 A P T 3 S+ 0 0 102 0, 0.0 -3,-0.1 0, 0.0 -4,-0.1 -0.433 85.8 28.8 -59.1 130.1 -0.9 7.9 16.6 86 77 A G T 3 S+ 0 0 52 1,-0.4 -26,-0.2 -26,-0.1 -25,-0.1 0.059 85.4 137.5 104.5 -24.7 0.3 9.6 19.8 87 78 A T < - 0 0 6 -3,-2.3 -1,-0.4 -6,-0.2 -3,-0.0 -0.252 49.3-145.8 -55.8 152.0 1.5 12.9 18.2 88 79 A K + 0 0 105 2,-0.1 2,-0.4 -7,-0.0 -1,-0.1 0.398 60.7 121.0 -97.9 -1.6 0.7 16.1 20.1 89 80 A M - 0 0 40 1,-0.1 2,-0.8 -9,-0.1 -8,-0.1 -0.578 53.4-154.1 -67.7 125.4 0.2 18.2 17.0 90 81 A A + 0 0 78 -2,-0.4 2,-0.3 -10,-0.1 -1,-0.1 -0.872 46.4 109.8-113.4 105.2 -3.4 19.4 17.3 91 82 A F - 0 0 53 -2,-0.8 -10,-0.3 1,-0.1 3,-0.1 -0.822 65.0-129.9-172.7 128.6 -5.0 20.1 13.9 92 83 A A - 0 0 79 -2,-0.3 2,-0.2 1,-0.2 -11,-0.1 0.821 55.5-118.8 -59.2 -30.9 -7.7 18.2 12.2 93 84 A G - 0 0 8 -14,-0.1 2,-0.7 -13,-0.1 -15,-0.3 -0.491 26.8 -72.4 112.2 165.7 -5.7 18.0 9.0 94 85 A L - 0 0 7 -17,-3.7 6,-0.1 -2,-0.2 -15,-0.0 -0.929 42.7-176.2-104.5 106.4 -6.2 19.3 5.4 95 86 A K + 0 0 118 -2,-0.7 2,-0.4 4,-0.1 -1,-0.1 0.890 58.8 77.1 -72.9 -44.4 -8.9 17.1 3.7 96 87 A K S > S- 0 0 128 1,-0.1 4,-1.4 2,-0.0 3,-0.1 -0.600 71.1-144.6 -75.9 128.8 -8.9 18.5 0.1 97 88 A E H > S+ 0 0 99 -2,-0.4 4,-1.9 1,-0.2 -1,-0.1 0.822 100.3 59.2 -55.4 -40.8 -6.0 17.3 -2.0 98 89 A K H > S+ 0 0 140 1,-0.2 4,-2.2 2,-0.2 3,-0.5 0.952 103.2 53.7 -58.9 -46.6 -5.8 20.7 -3.7 99 90 A D H > S+ 0 0 27 1,-0.3 4,-2.5 2,-0.2 -2,-0.2 0.843 109.6 46.5 -52.6 -47.1 -5.2 22.3 -0.3 100 91 A R H X S+ 0 0 31 -4,-1.4 4,-2.4 2,-0.2 -1,-0.3 0.707 109.0 53.9 -67.4 -37.8 -2.3 20.1 0.5 101 92 A N H X S+ 0 0 3 -4,-1.9 4,-1.3 -3,-0.5 -91,-0.5 0.942 110.6 46.5 -68.6 -47.2 -0.6 20.5 -2.9 102 93 A D H >X S+ 0 0 24 -4,-2.2 4,-2.4 2,-0.2 3,-0.7 0.957 116.2 45.9 -55.2 -54.8 -0.7 24.3 -2.6 103 94 A L H 3X S+ 0 0 2 -4,-2.5 4,-3.1 1,-0.3 -1,-0.2 0.914 112.1 48.3 -53.4 -54.9 0.7 24.2 1.0 104 95 A I H 3X S+ 0 0 0 -4,-2.4 4,-2.9 1,-0.2 -1,-0.3 0.703 106.6 60.6 -58.7 -26.0 3.4 21.6 0.3 105 96 A T H < S+ 0 0 133 -4,-1.8 3,-1.1 -3,-0.3 -2,-0.2 0.931 119.9 44.6 -83.5 -49.8 10.1 26.3 -1.2 110 101 A A H 3< S+ 0 0 29 -4,-4.2 -79,-0.2 1,-0.3 -3,-0.2 0.831 110.0 56.4 -63.4 -39.2 10.0 28.3 2.1 111 102 A A T 3< 0 0 4 -4,-3.2 -68,-2.5 -5,-0.4 -1,-0.3 0.407 360.0 360.0 -79.1 2.7 11.6 25.5 4.0 112 103 A K < 0 0 171 -3,-1.1 -81,-0.2 -5,-0.2 -70,-0.0 -0.645 360.0 360.0 -94.2 360.0 14.7 25.3 1.8