==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 29-DEC-04 1YEZ . COMPND 2 MOLECULE: MM1357; . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA MAZEI; . AUTHOR P.ROSSI,J.M.ARAMINI,G.V.T.SWAPNA,Y.P.HUANG,R.XIAO,C.K.HO,L.C . 68 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5290.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 73.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 4.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 36.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 17 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 183 0, 0.0 4,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 153.5 -15.9 16.9 -12.6 2 2 A F + 0 0 186 2,-0.1 2,-0.4 0, 0.0 0, 0.0 0.670 360.0 72.5 -82.2 -19.0 -18.7 19.5 -12.1 3 3 A R S S- 0 0 174 1,-0.0 2,-0.1 0, 0.0 3,-0.0 -0.831 92.5-116.7 -97.6 132.7 -18.7 18.5 -8.4 4 4 A E - 0 0 163 -2,-0.4 2,-0.5 1,-0.1 -2,-0.1 -0.367 31.7-110.7 -64.3 144.1 -15.7 19.6 -6.3 5 5 A E - 0 0 166 1,-0.1 -1,-0.1 -4,-0.1 0, 0.0 -0.684 16.8-157.9 -80.8 124.1 -13.7 16.8 -4.8 6 6 A S - 0 0 86 -2,-0.5 3,-0.2 2,-0.1 -1,-0.1 0.577 34.8-128.5 -74.1 -9.6 -14.1 16.4 -1.0 7 7 A R + 0 0 133 1,-0.2 2,-1.3 0, 0.0 -1,-0.1 0.710 45.6 168.1 64.6 23.8 -10.7 14.6 -1.1 8 8 A S + 0 0 102 2,-0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.545 14.4 171.0 -68.1 94.7 -12.3 11.8 0.9 9 9 A V - 0 0 56 -2,-1.3 3,-0.0 -3,-0.2 0, 0.0 -0.747 42.8-128.2-111.1 157.2 -9.5 9.3 0.5 10 10 A P S S+ 0 0 48 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.898 90.1 32.6 -67.1 -42.9 -8.9 5.9 2.1 11 11 A V - 0 0 3 23,-0.1 2,-0.2 4,-0.0 -2,-0.0 -0.898 61.1-168.4-126.3 146.6 -5.3 6.6 3.3 12 12 A E > - 0 0 87 -2,-0.3 3,-1.0 42,-0.1 2,-0.3 -0.757 44.5 -71.4-121.1 171.5 -3.3 9.6 4.5 13 13 A E T 3 S+ 0 0 93 -2,-0.2 42,-0.2 1,-0.2 43,-0.2 -0.468 115.4 22.0 -66.5 125.1 0.4 10.2 5.1 14 14 A G T 3 S+ 0 0 40 40,-3.2 -1,-0.2 1,-0.3 41,-0.2 0.689 91.0 130.1 96.4 23.1 1.7 8.4 8.1 15 15 A E E < -A 54 0A 66 39,-1.2 39,-2.1 -3,-1.0 2,-0.4 -0.527 43.4-145.1-105.3 171.7 -0.9 5.6 8.5 16 16 A V E +A 53 0A 71 37,-0.3 2,-0.4 -2,-0.2 37,-0.2 -0.991 17.0 177.0-142.0 129.3 -0.6 1.8 8.8 17 17 A Y E -A 52 0A 78 35,-2.2 35,-2.8 -2,-0.4 2,-1.3 -0.987 34.7-124.1-134.8 142.5 -2.8 -0.9 7.5 18 18 A D E +A 51 0A 133 -2,-0.4 33,-0.3 33,-0.3 2,-0.3 -0.719 51.8 169.3 -82.0 94.3 -2.8 -4.7 7.5 19 19 A V E -A 50 0A 16 31,-2.5 31,-2.3 -2,-1.3 2,-0.5 -0.701 35.1-136.1-111.5 159.1 -3.0 -5.3 3.7 20 20 A T E -A 49 0A 61 -2,-0.3 2,-1.1 29,-0.2 29,-0.2 -0.972 27.6-122.1-112.7 126.0 -2.6 -8.2 1.4 21 21 A I + 0 0 0 27,-2.7 26,-3.5 -2,-0.5 27,-0.4 -0.553 37.0 172.4 -69.6 100.6 -0.6 -7.6 -1.7 22 22 A Q + 0 0 119 -2,-1.1 2,-0.3 9,-0.7 -1,-0.2 0.829 62.7 12.0 -81.5 -34.7 -3.1 -8.5 -4.4 23 23 A D E -B 31 0A 82 8,-1.6 8,-3.3 -3,-0.1 2,-0.3 -0.872 63.5-147.1-138.6 170.4 -1.1 -7.4 -7.4 24 24 A I E -B 30 0A 46 6,-0.3 2,-0.3 -2,-0.3 6,-0.2 -0.990 13.4-134.6-145.4 131.7 2.4 -6.3 -8.3 25 25 A A E >> -B 29 0A 29 4,-3.0 3,-2.5 -2,-0.3 2,-1.2 -0.648 45.9 -90.9 -83.6 144.2 3.8 -3.9 -10.8 26 26 A R T 34 S+ 0 0 251 -2,-0.3 -1,-0.1 1,-0.3 -2,-0.0 -0.367 118.2 50.9 -64.6 92.9 6.8 -5.1 -12.9 27 27 A Q T 34 S- 0 0 172 -2,-1.2 -1,-0.3 2,-0.0 3,-0.1 0.013 127.4 -79.3 166.3 -27.1 9.6 -3.9 -10.7 28 28 A G T <4 S+ 0 0 26 -3,-2.5 15,-3.0 1,-0.3 16,-1.4 0.450 81.0 142.9 120.3 7.4 8.6 -5.3 -7.4 29 29 A D E < -BC 25 42A 35 -4,-1.0 -4,-3.0 13,-0.3 2,-0.4 -0.705 46.7-136.0 -83.3 114.7 6.1 -2.8 -6.3 30 30 A G E -BC 24 41A 0 11,-2.7 11,-2.6 -2,-0.7 2,-0.8 -0.569 14.5-139.5 -71.7 126.4 3.2 -4.4 -4.5 31 31 A I E -BC 23 40A 22 -8,-3.3 -8,-1.6 -2,-0.4 2,-0.9 -0.797 19.0-175.9 -94.4 107.2 -0.1 -3.0 -5.7 32 32 A A E - C 0 39A 5 7,-2.8 7,-1.9 -2,-0.8 2,-1.1 -0.869 9.0-168.7 -99.8 96.3 -2.6 -2.5 -2.8 33 33 A R E - C 0 38A 163 -2,-0.9 2,-0.8 5,-0.2 5,-0.2 -0.728 2.2-171.2 -93.3 93.5 -5.7 -1.4 -4.6 34 34 A I E > S- C 0 37A 52 3,-2.0 3,-2.5 -2,-1.1 -23,-0.1 -0.772 78.2 -29.6 -89.1 109.9 -8.1 -0.1 -2.0 35 35 A E T 3 S- 0 0 195 -2,-0.8 -1,-0.2 1,-0.3 3,-0.1 0.587 129.3 -47.3 57.6 12.9 -11.5 0.5 -3.7 36 36 A G T 3 S+ 0 0 43 1,-0.4 2,-0.4 0, 0.0 -1,-0.3 0.135 108.4 126.7 116.4 -19.7 -9.4 1.2 -6.8 37 37 A F E < -C 34 0A 44 -3,-2.5 -3,-2.0 1,-0.1 2,-0.7 -0.606 57.2-134.7 -73.7 125.7 -6.9 3.5 -5.2 38 38 A V E -C 33 0A 46 -2,-0.4 24,-1.6 22,-0.4 2,-0.5 -0.740 22.3-174.8 -93.2 112.6 -3.4 2.2 -6.1 39 39 A I E -Cd 32 62A 0 -7,-1.9 -7,-2.8 -2,-0.7 2,-0.6 -0.921 16.5-143.5-103.2 126.8 -0.9 2.1 -3.2 40 40 A F E +Cd 31 63A 47 22,-3.1 24,-2.1 -2,-0.5 -9,-0.2 -0.811 18.8 179.3 -95.2 121.8 2.6 1.1 -4.2 41 41 A V E -C 30 0A 0 -11,-2.6 -11,-2.7 -2,-0.6 3,-0.3 -0.834 20.4-149.8-120.3 89.9 4.5 -1.0 -1.7 42 42 A P E S+C 29 0A 65 0, 0.0 24,-0.3 0, 0.0 -13,-0.3 -0.397 74.4 31.7 -66.1 127.5 8.0 -1.8 -3.2 43 43 A G S S+ 0 0 66 -15,-3.0 2,-0.2 1,-0.2 -14,-0.2 0.853 90.1 116.0 96.8 43.2 9.5 -5.0 -2.1 44 44 A T - 0 0 22 -16,-1.4 2,-0.3 -3,-0.3 -1,-0.2 -0.620 51.7-124.8-128.1-171.7 6.5 -7.3 -1.6 45 45 A K > - 0 0 138 -2,-0.2 3,-2.3 3,-0.0 2,-0.3 -0.962 35.1 -87.6-140.1 152.9 5.0 -10.5 -3.0 46 46 A V T 3 S+ 0 0 94 -2,-0.3 -24,-0.2 1,-0.3 3,-0.1 -0.455 117.7 13.0 -63.0 118.4 1.6 -11.6 -4.4 47 47 A G T 3 S+ 0 0 45 -26,-3.5 2,-0.5 -2,-0.3 -1,-0.3 0.454 89.4 148.1 94.2 1.9 -0.5 -12.7 -1.5 48 48 A D < - 0 0 48 -3,-2.3 -27,-2.7 -27,-0.4 2,-0.8 -0.602 35.8-154.1 -76.2 119.4 1.8 -11.2 1.1 49 49 A E E +A 20 0A 160 -2,-0.5 2,-0.3 -29,-0.2 -29,-0.2 -0.847 33.2 146.7 -98.7 108.1 -0.1 -10.1 4.1 50 50 A V E -A 19 0A 20 -31,-2.3 -31,-2.5 -2,-0.8 2,-0.8 -0.916 54.4-105.4-139.8 160.2 1.8 -7.3 5.9 51 51 A R E -A 18 0A 112 -2,-0.3 16,-2.4 -33,-0.3 2,-0.5 -0.819 41.5-160.8 -86.1 110.4 1.3 -4.1 7.9 52 52 A I E -AE 17 66A 1 -35,-2.8 -35,-2.2 -2,-0.8 2,-0.9 -0.813 12.2-144.6 -97.5 132.4 2.2 -1.3 5.5 53 53 A K E -AE 16 65A 85 12,-3.4 12,-1.8 -2,-0.5 2,-1.3 -0.859 14.9-142.8 -92.9 104.9 3.1 2.1 6.7 54 54 A V E -AE 15 64A 0 -39,-2.1 -40,-3.2 -2,-0.9 -39,-1.2 -0.598 22.0-177.5 -69.3 97.2 1.7 4.6 4.2 55 55 A E E - 0 0 119 -2,-1.3 2,-0.3 8,-0.8 -1,-0.2 0.938 61.0 -11.0 -65.4 -48.5 4.6 7.0 4.3 56 56 A R E - E 0 63A 149 7,-1.4 7,-2.7 -43,-0.2 2,-0.4 -0.963 59.6-137.2-151.0 161.8 3.0 9.6 1.9 57 57 A V E - E 0 62A 20 -2,-0.3 5,-0.2 5,-0.2 -44,-0.1 -0.983 11.0-163.2-129.0 135.6 0.2 10.0 -0.5 58 58 A L - 0 0 50 3,-2.7 3,-0.4 -2,-0.4 -2,-0.0 -0.823 37.6-106.4-111.6 157.5 0.2 11.5 -4.0 59 59 A P S S+ 0 0 100 0, 0.0 3,-0.1 0, 0.0 -1,-0.0 0.652 121.2 30.2 -57.3 -16.4 -3.0 12.7 -5.9 60 60 A K S S- 0 0 166 1,-0.4 -22,-0.4 -23,-0.0 2,-0.3 0.591 132.3 -2.9-117.3 -18.2 -2.6 9.7 -8.2 61 61 A F - 0 0 69 -3,-0.4 -3,-2.7 -24,-0.1 -1,-0.4 -0.981 61.7-124.7-169.9 161.1 -0.9 7.0 -6.0 62 62 A A E -dE 39 57A 0 -24,-1.6 -22,-3.1 -2,-0.3 2,-0.4 -0.836 12.9-138.2-120.1 156.6 0.4 6.4 -2.5 63 63 A F E +dE 40 56A 83 -7,-2.7 -7,-1.4 -2,-0.3 -8,-0.8 -0.945 27.9 163.9-114.4 134.2 3.8 5.1 -1.1 64 64 A A E - E 0 54A 2 -24,-2.1 2,-0.3 -2,-0.4 -10,-0.3 -0.985 19.2-152.9-145.7 154.9 4.0 2.6 1.7 65 65 A S E - E 0 53A 53 -12,-1.8 -12,-3.4 -2,-0.3 2,-0.6 -0.909 29.3-102.9-128.5 157.1 6.7 0.3 3.2 66 66 A V E + E 0 52A 45 -2,-0.3 -14,-0.2 -24,-0.3 -2,-0.0 -0.677 29.7 176.7 -84.2 119.6 6.4 -2.9 5.2 67 67 A V 0 0 75 -16,-2.4 -1,-0.1 -2,-0.6 -15,-0.1 0.178 360.0 360.0-104.6 15.9 7.0 -2.5 8.9 68 68 A E 0 0 181 -17,-0.4 -16,-0.1 0, 0.0 -18,-0.1 0.978 360.0 360.0 54.0 360.0 6.3 -6.2 9.5