==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN TRANSPORT 05-JAN-05 1YGT . COMPND 2 MOLECULE: CYTOPLASMIC DYNEIN LIGHT CHAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; . AUTHOR J.C.WILLIAMS,H.XIE,W.A.HENDRICKSON . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7512.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 59.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 20.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 28.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 8 A S 0 0 181 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 164.0 -9.4 36.6 15.0 2 9 A Q - 0 0 146 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.961 360.0-164.2-159.9 166.9 -7.8 33.7 16.9 3 10 A F - 0 0 160 -2,-0.3 2,-0.4 2,-0.0 0, 0.0 -0.988 16.3-144.4-157.5 154.0 -6.5 30.2 16.1 4 11 A I - 0 0 151 -2,-0.3 2,-0.1 0, 0.0 -2,-0.0 -1.000 31.8-125.4-118.6 127.6 -5.5 26.9 17.7 5 12 A V - 0 0 71 -2,-0.4 2,-0.1 1,-0.1 -2,-0.0 -0.421 25.0-115.6 -77.8 125.3 -2.5 25.1 16.2 6 13 A D > - 0 0 86 -2,-0.1 4,-2.4 1,-0.1 5,-0.2 -0.384 27.1-111.6 -58.9 154.7 -3.0 21.5 15.1 7 14 A D H > S+ 0 0 130 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.848 112.8 51.7 -57.3 -44.5 -1.0 18.8 16.9 8 15 A V H > S+ 0 0 58 1,-0.2 4,-2.7 2,-0.2 5,-0.3 0.942 112.5 45.5 -62.5 -48.0 1.3 17.8 14.0 9 16 A S H > S+ 0 0 23 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.904 114.2 49.8 -61.3 -38.4 2.3 21.4 13.2 10 17 A K H X S+ 0 0 99 -4,-2.4 4,-2.2 1,-0.2 -1,-0.2 0.931 113.6 44.1 -70.7 -40.2 2.9 22.1 17.0 11 18 A T H X S+ 0 0 50 -4,-2.5 4,-2.0 2,-0.2 -1,-0.2 0.844 113.1 50.8 -78.5 -30.9 5.0 19.1 17.5 12 19 A I H X S+ 0 0 1 -4,-2.7 4,-2.5 2,-0.2 -1,-0.2 0.913 110.9 49.4 -66.4 -44.7 7.0 19.6 14.3 13 20 A K H X S+ 0 0 108 -4,-2.3 4,-2.7 -5,-0.3 5,-0.2 0.956 109.9 51.6 -60.9 -42.9 7.8 23.2 15.3 14 21 A E H X S+ 0 0 94 -4,-2.2 4,-2.5 -5,-0.2 5,-0.3 0.917 107.4 52.6 -61.2 -39.9 8.8 22.0 18.7 15 22 A A H X S+ 0 0 12 -4,-2.0 4,-1.9 1,-0.2 -1,-0.2 0.916 111.1 47.6 -63.5 -39.3 11.2 19.5 17.1 16 23 A I H X S+ 0 0 0 -4,-2.5 4,-2.7 1,-0.2 5,-0.5 0.954 112.5 47.6 -63.1 -48.5 12.8 22.2 15.0 17 24 A E H X S+ 0 0 89 -4,-2.7 4,-1.9 1,-0.2 -2,-0.2 0.879 112.7 49.7 -63.2 -37.2 13.2 24.6 18.0 18 25 A T H < S+ 0 0 97 -4,-2.5 -1,-0.2 -5,-0.2 -2,-0.2 0.877 115.3 44.4 -65.3 -44.4 14.7 21.9 20.1 19 26 A T H < S+ 0 0 16 -4,-1.9 -2,-0.2 -5,-0.3 -1,-0.2 0.912 135.4 6.4 -71.0 -45.0 17.2 20.9 17.4 20 27 A I H >< S+ 0 0 0 -4,-2.7 3,-1.8 -5,-0.1 -3,-0.2 0.430 88.8 122.9-122.2 -2.5 18.3 24.4 16.3 21 28 A G T 3< S+ 0 0 22 -4,-1.9 3,-0.1 -5,-0.5 69,-0.0 -0.402 77.2 29.3 -71.0 136.2 16.9 27.0 18.6 22 29 A G T 3 S+ 0 0 81 1,-0.3 -1,-0.3 -2,-0.1 2,-0.2 0.302 101.1 114.3 95.6 2.6 19.5 29.2 20.3 23 30 A N < - 0 0 65 -3,-1.8 2,-0.4 3,-0.0 69,-0.3 -0.634 56.3-142.4-114.7 153.8 21.9 28.7 17.3 24 31 A A - 0 0 49 -2,-0.2 69,-0.0 -3,-0.1 -3,-0.0 -0.911 42.8 -89.1-109.0 145.3 23.4 31.1 14.7 25 32 A Y + 0 0 57 -2,-0.4 2,-0.4 36,-0.1 -1,-0.0 -0.229 47.9 176.0 -50.8 128.1 23.9 29.9 11.1 26 33 A Q >> - 0 0 91 1,-0.1 3,-2.3 -3,-0.0 4,-1.3 -0.939 24.7-145.0-137.7 108.8 27.3 28.4 10.7 27 34 A H H >> S+ 0 0 118 -2,-0.4 4,-0.6 1,-0.3 3,-0.6 0.823 95.8 50.0 -44.7 -52.9 28.0 26.9 7.3 28 35 A D H 34 S+ 0 0 136 1,-0.2 -1,-0.3 2,-0.1 4,-0.2 0.633 116.4 42.0 -66.8 -17.0 30.1 23.9 8.3 29 36 A K H <> S+ 0 0 104 -3,-2.3 4,-2.1 2,-0.1 -1,-0.2 0.503 93.9 79.5-101.7 -17.8 27.6 22.8 11.0 30 37 A V H S+ 0 0 98 1,-0.2 4,-2.6 -4,-0.2 -2,-0.2 0.919 112.9 50.8 -65.1 -38.3 24.4 18.1 10.3 33 40 A W H X S+ 0 0 25 -4,-2.1 4,-2.2 1,-0.2 -1,-0.2 0.890 108.6 51.2 -62.8 -42.7 21.7 20.3 11.9 34 41 A T H X S+ 0 0 29 -4,-2.6 4,-2.2 2,-0.2 -1,-0.2 0.897 111.3 48.6 -63.1 -40.3 19.4 19.9 8.8 35 42 A G H X S+ 0 0 26 -4,-1.8 4,-2.1 -5,-0.2 -2,-0.2 0.897 110.4 51.4 -65.0 -39.6 19.9 16.1 9.1 36 43 A Q H X S+ 0 0 72 -4,-2.6 4,-2.5 2,-0.2 -1,-0.2 0.894 107.4 53.3 -64.8 -39.6 19.1 16.2 12.8 37 44 A V H X S+ 0 0 0 -4,-2.2 4,-2.8 -5,-0.2 5,-0.2 0.949 110.9 46.0 -60.5 -44.4 15.9 18.2 12.2 38 45 A V H X S+ 0 0 36 -4,-2.2 4,-2.4 1,-0.2 -1,-0.2 0.876 113.5 48.5 -66.6 -43.9 14.6 15.6 9.7 39 46 A E H X S+ 0 0 129 -4,-2.1 4,-2.0 -5,-0.2 -1,-0.2 0.936 113.7 46.3 -61.9 -40.5 15.5 12.7 11.9 40 47 A N H X S+ 0 0 69 -4,-2.5 4,-1.8 1,-0.2 -2,-0.2 0.883 114.0 47.9 -72.9 -32.1 13.8 14.3 15.0 41 48 A C H X S+ 0 0 0 -4,-2.8 4,-1.1 2,-0.2 -1,-0.2 0.864 109.9 52.7 -76.7 -31.0 10.7 15.2 13.0 42 49 A L H >X S+ 0 0 68 -4,-2.4 4,-2.9 -5,-0.2 3,-0.7 0.934 107.5 52.1 -65.8 -42.6 10.5 11.7 11.5 43 50 A T H 3X S+ 0 0 79 -4,-2.0 4,-2.3 1,-0.3 -2,-0.2 0.937 101.4 61.3 -57.0 -38.5 10.6 10.3 15.1 44 51 A V H 3< S+ 0 0 27 -4,-1.8 -1,-0.3 1,-0.2 4,-0.2 0.802 113.7 37.3 -49.9 -46.7 7.7 12.7 16.0 45 52 A L H X< S+ 0 0 18 -4,-1.1 3,-1.2 -3,-0.7 5,-0.4 0.933 115.6 48.7 -77.0 -46.8 5.7 10.8 13.4 46 53 A T H >< S+ 0 0 61 -4,-2.9 3,-1.8 1,-0.3 -2,-0.2 0.759 94.9 71.5 -75.9 -20.6 6.8 7.2 13.8 47 54 A K T 3< S+ 0 0 132 -4,-2.3 -1,-0.3 1,-0.3 -2,-0.1 0.737 88.7 65.5 -64.2 -16.7 6.5 7.0 17.5 48 55 A E T < S- 0 0 112 -3,-1.2 -1,-0.3 -4,-0.2 -2,-0.2 0.562 98.8-138.9 -81.1 -7.6 2.7 7.0 17.1 49 56 A Q < + 0 0 165 -3,-1.8 -2,-0.1 1,-0.2 -3,-0.1 0.893 41.6 161.6 50.6 49.4 2.9 3.6 15.3 50 57 A K - 0 0 118 -5,-0.4 2,-2.5 -4,-0.1 -1,-0.2 -0.670 51.4-103.3 -96.4 156.8 0.3 4.4 12.6 51 58 A P S S+ 0 0 93 0, 0.0 53,-2.2 0, 0.0 2,-0.3 -0.335 80.9 107.5 -85.0 58.7 -0.0 2.5 9.3 52 59 A Y E -A 103 0A 88 -2,-2.5 2,-0.3 51,-0.2 51,-0.2 -0.968 64.5-131.0-133.7 153.1 1.7 5.0 7.1 53 60 A K E -A 102 0A 148 49,-3.1 49,-2.8 -2,-0.3 2,-0.4 -0.794 34.9-151.9 -93.6 146.4 4.9 5.5 5.1 54 61 A Y E -A 101 0A 51 -2,-0.3 2,-0.4 47,-0.2 47,-0.2 -0.982 19.7-168.4-124.7 148.3 6.4 8.9 5.8 55 62 A I E -A 100 0A 93 45,-2.3 45,-2.7 -2,-0.4 2,-0.4 -0.986 12.3-173.8-125.9 131.6 8.6 11.4 3.9 56 63 A V E +A 99 0A 24 -2,-0.4 2,-0.4 43,-0.2 43,-0.2 -0.991 4.0 179.9-128.4 131.2 10.2 14.3 5.9 57 64 A T E -A 98 0A 66 41,-2.7 41,-2.5 -2,-0.4 2,-0.3 -0.959 1.7-175.7-126.3 151.1 12.1 17.0 4.1 58 65 A A E -A 97 0A 25 -2,-0.4 2,-0.4 39,-0.2 39,-0.2 -0.993 8.4-166.8-144.3 155.6 13.8 20.0 5.6 59 66 A M E -A 96 0A 60 37,-2.1 37,-2.2 -2,-0.3 2,-0.5 -0.996 4.4-163.3-139.6 138.9 15.6 23.1 4.4 60 67 A I E -A 95 0A 26 -2,-0.4 2,-0.5 35,-0.2 35,-0.2 -0.996 12.7-172.6-120.4 122.6 17.7 25.6 6.3 61 68 A M E -A 94 0A 39 33,-2.5 33,-2.4 -2,-0.5 2,-0.2 -0.972 24.7-124.0-116.8 132.5 18.4 28.9 4.5 62 69 A Q E -A 93 0A 95 -2,-0.5 2,-0.5 31,-0.2 4,-0.3 -0.534 33.6-113.0 -65.6 140.4 20.8 31.6 5.8 63 70 A K + 0 0 66 29,-2.5 -1,-0.1 -2,-0.2 -38,-0.0 -0.635 65.0 133.8 -78.2 118.2 18.9 34.9 6.1 64 71 A N S S- 0 0 135 -2,-0.5 -1,-0.2 2,-0.1 -2,-0.1 0.161 81.8 -89.6-149.7 10.8 20.5 37.2 3.6 65 72 A G S S+ 0 0 84 1,-0.3 -2,-0.1 -3,-0.0 2,-0.1 0.402 77.4 146.3 84.9 3.3 17.5 38.9 1.9 66 73 A A - 0 0 65 -4,-0.3 -1,-0.3 1,-0.1 2,-0.2 -0.374 49.2-120.6 -75.9 144.4 17.0 36.2 -0.8 67 74 A G - 0 0 66 -2,-0.1 2,-0.3 2,-0.0 -1,-0.1 -0.565 31.3-172.3 -78.8 145.7 13.6 35.3 -2.1 68 75 A L - 0 0 73 -2,-0.2 2,-0.4 2,-0.0 -7,-0.0 -0.988 8.4-178.2-143.2 137.8 12.6 31.7 -1.7 69 76 A H - 0 0 173 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.996 4.1-178.4-136.6 136.2 9.5 29.8 -3.0 70 77 A T + 0 0 89 -2,-0.4 2,-0.3 2,-0.0 -2,-0.0 -0.940 4.8 168.1-136.0 157.1 8.5 26.2 -2.5 71 78 A A - 0 0 103 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.993 11.9-159.7-157.2 159.1 5.7 24.0 -3.7 72 79 A S - 0 0 76 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.989 3.7-171.2-142.6 156.9 4.7 20.3 -3.8 73 80 A S - 0 0 121 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.990 11.4-164.9-143.9 148.4 2.4 18.1 -5.7 74 81 A C - 0 0 53 -2,-0.3 2,-0.5 2,-0.0 -2,-0.0 -0.910 22.5-149.3-140.0 155.8 1.4 14.5 -5.1 75 82 A Y + 0 0 236 -2,-0.3 2,-0.2 2,-0.0 -2,-0.0 -0.954 60.0 104.6-121.1 106.0 -0.2 11.5 -6.7 76 83 A W S S- 0 0 69 -2,-0.5 2,-0.8 5,-0.1 26,-0.1 -0.821 79.4 -54.8-159.7-162.5 -1.8 9.6 -3.9 77 84 A N >> - 0 0 76 -2,-0.2 4,-2.9 1,-0.2 3,-1.1 -0.790 40.2-164.6-101.6 110.1 -5.1 8.7 -2.1 78 85 A N T 34 S+ 0 0 132 -2,-0.8 -1,-0.2 1,-0.3 -3,-0.0 0.694 84.7 61.8 -68.3 -18.4 -6.6 12.0 -1.2 79 86 A D T 34 S+ 0 0 151 1,-0.1 -1,-0.3 -3,-0.0 -2,-0.0 0.793 124.1 13.0 -74.0 -28.1 -9.0 10.4 1.2 80 87 A T T <4 S+ 0 0 60 -3,-1.1 2,-0.3 23,-0.1 -2,-0.2 0.607 110.1 77.9-123.1 -18.9 -6.2 9.0 3.4 81 88 A D < + 0 0 21 -4,-2.9 2,-0.3 21,-0.1 21,-0.2 -0.684 52.0 152.0-105.0 149.7 -2.9 10.7 2.6 82 89 A G E -B 101 0A 32 19,-2.1 19,-2.9 -2,-0.3 2,-0.3 -0.964 25.3-140.5-164.4 176.8 -1.8 14.1 3.6 83 90 A S E -B 100 0A 66 -2,-0.3 2,-0.3 17,-0.2 17,-0.2 -0.918 1.9-158.6-148.9 162.7 0.9 16.6 4.4 84 91 A C E -B 99 0A 21 15,-2.0 15,-2.6 -2,-0.3 2,-0.4 -0.970 7.0-160.9-143.1 141.9 1.9 19.4 6.7 85 92 A T E -B 98 0A 71 -2,-0.3 2,-0.4 13,-0.2 13,-0.2 -0.983 6.5-170.0-126.5 141.9 4.5 22.2 6.3 86 93 A V E -B 97 0A 12 11,-2.8 11,-2.3 -2,-0.4 2,-0.4 -0.984 6.9-156.6-127.7 140.1 5.9 24.3 9.1 87 94 A R E +B 96 0A 170 -2,-0.4 2,-0.3 9,-0.2 9,-0.2 -0.909 15.1 175.8-117.6 142.9 8.1 27.3 8.8 88 95 A W E +B 95 0A 13 7,-2.4 7,-3.0 -2,-0.4 2,-0.3 -0.965 2.4 175.8-139.0 143.9 10.5 28.4 11.6 89 96 A E E -B 94 0A 98 -2,-0.3 2,-0.2 5,-0.2 5,-0.2 -0.983 13.5-179.8-150.5 156.8 13.0 31.3 11.8 90 97 A N - 0 0 38 3,-2.0 3,-0.1 -2,-0.3 -66,-0.0 -0.706 58.8 -70.7-131.6-159.6 15.4 33.0 14.1 91 98 A K S S+ 0 0 198 -2,-0.2 -67,-0.1 1,-0.2 3,-0.1 0.814 128.5 27.2 -71.9 -22.5 17.7 36.0 13.4 92 99 A T S S+ 0 0 49 -69,-0.3 -29,-2.5 1,-0.1 2,-0.3 0.525 119.7 31.5-115.4 -8.1 20.1 34.2 11.1 93 100 A M E -A 62 0A 0 -31,-0.3 -3,-2.0 -3,-0.1 2,-0.3 -0.990 51.5-146.7-147.3 158.4 18.2 31.3 9.5 94 101 A Y E -AB 61 89A 68 -33,-2.4 -33,-2.5 -2,-0.3 2,-0.4 -0.920 18.4-167.1-115.3 144.2 14.8 30.1 8.2 95 102 A C E -AB 60 88A 0 -7,-3.0 -7,-2.4 -2,-0.3 2,-0.5 -0.992 3.3-173.3-135.8 125.9 14.0 26.4 8.4 96 103 A I E -AB 59 87A 19 -37,-2.2 -37,-2.1 -2,-0.4 2,-0.4 -0.992 3.5-172.1-119.3 131.2 11.0 24.9 6.6 97 104 A V E -AB 58 86A 0 -11,-2.3 -11,-2.8 -2,-0.5 2,-0.4 -0.970 3.2-170.4-124.3 139.1 10.0 21.3 7.2 98 105 A S E -AB 57 85A 18 -41,-2.5 -41,-2.7 -2,-0.4 2,-0.4 -0.962 2.9-168.7-127.4 136.0 7.4 19.4 5.2 99 106 A V E -AB 56 84A 10 -15,-2.6 -15,-2.0 -2,-0.4 2,-0.4 -0.973 0.4-167.5-122.5 141.6 6.1 15.9 6.2 100 107 A F E -AB 55 83A 27 -45,-2.7 -45,-2.3 -2,-0.4 2,-0.5 -0.987 3.1-162.3-132.0 134.2 4.0 13.7 4.1 101 108 A G E -AB 54 82A 11 -19,-2.9 -19,-2.1 -2,-0.4 2,-0.5 -0.986 4.9-171.2-120.0 128.1 2.1 10.6 5.3 102 109 A L E -A 53 0A 53 -49,-2.8 -49,-3.1 -2,-0.5 -21,-0.1 -0.981 24.6-123.2-123.8 120.7 0.9 7.9 2.8 103 110 A A E A 52 0A 39 -2,-0.5 -51,-0.2 -51,-0.2 -26,-0.1 -0.273 360.0 360.0 -68.3 142.0 -1.4 5.2 4.0 104 111 A V 0 0 150 -53,-2.2 -52,-0.1 -2,-0.0 -1,-0.1 0.696 360.0 360.0 -95.2 360.0 -0.3 1.6 3.5