==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 13-JAN-05 1YIU . COMPND 2 MOLECULE: ITCHY E3 UBIQUITIN PROTEIN LIGASE; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR A.Z.SHAW,P.MARTIN-MALPARTIDA,B.MORALES,F.YRAOLA,M.ROYO, . 37 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3180.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 17 45.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 21.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 109 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-156.4 -12.7 -9.1 -3.0 2 2 A A - 0 0 99 1,-0.1 0, 0.0 2,-0.1 0, 0.0 0.992 360.0-171.9 57.5 70.0 -10.3 -8.9 0.0 3 3 A M - 0 0 140 1,-0.3 -1,-0.1 33,-0.2 0, 0.0 0.150 57.9 -69.7 -80.0 21.9 -7.5 -10.9 -1.5 4 4 A G - 0 0 37 2,-0.0 -1,-0.3 3,-0.0 -2,-0.1 -0.344 66.2 -58.1 110.5 163.9 -5.8 -10.9 1.9 5 5 A P - 0 0 110 0, 0.0 6,-0.1 0, 0.0 5,-0.0 -0.223 67.9 -79.1 -73.4 168.4 -4.0 -8.4 4.1 6 6 A L - 0 0 28 4,-0.2 3,-0.3 1,-0.1 -2,-0.0 -0.476 54.6 -96.6 -74.0 138.9 -1.1 -6.3 3.1 7 7 A P > - 0 0 37 0, 0.0 3,-3.7 0, 0.0 -1,-0.1 -0.236 66.4 -66.0 -53.5 142.2 2.4 -8.0 3.1 8 8 A P T 3 S+ 0 0 128 0, 0.0 18,-0.1 0, 0.0 3,-0.1 -0.012 130.3 15.4 -40.9 97.1 4.3 -7.3 6.4 9 9 A G T 3 S+ 0 0 14 1,-0.5 16,-3.1 -3,-0.3 19,-0.1 0.001 104.7 102.3 126.6 -27.3 5.0 -3.5 6.1 10 10 A W < + 0 0 43 -3,-3.7 -1,-0.5 14,-0.2 2,-0.3 -0.373 41.5 174.7 -85.5 163.5 2.5 -2.6 3.3 11 11 A E - 0 0 86 12,-0.4 12,-2.0 -2,-0.1 2,-1.0 -0.948 36.9-113.5-163.6 152.2 -0.9 -0.9 3.7 12 12 A K E +A 22 0A 136 -2,-0.3 10,-0.2 10,-0.2 2,-0.2 -0.778 50.3 170.8 -91.8 100.9 -3.6 0.5 1.5 13 13 A R E -A 21 0A 126 8,-2.9 8,-2.8 -2,-1.0 2,-0.3 -0.649 27.9-131.0-111.2 163.7 -3.5 4.3 2.2 14 14 A T E -A 20 0A 98 6,-0.2 6,-0.2 -2,-0.2 2,-0.1 -0.880 18.1-142.5-114.4 147.7 -5.1 7.3 0.7 15 15 A D - 0 0 43 4,-2.0 -1,-0.0 -2,-0.3 6,-0.0 -0.217 36.6 -88.4 -94.9-169.4 -3.4 10.5 -0.3 16 16 A S S S+ 0 0 129 1,-0.2 -1,-0.0 2,-0.1 -2,-0.0 0.773 124.4 45.0 -71.3 -24.9 -4.4 14.2 -0.1 17 17 A N S S- 0 0 103 2,-0.1 -1,-0.2 0, 0.0 -3,-0.0 0.750 123.7 -92.2 -97.9 -25.8 -6.2 14.1 -3.4 18 18 A G S S+ 0 0 59 1,-0.3 2,-0.2 0, 0.0 -2,-0.1 0.536 76.8 135.3 126.4 14.8 -8.1 10.9 -3.1 19 19 A R - 0 0 153 1,-0.0 -4,-2.0 0, 0.0 2,-0.6 -0.570 50.6-128.0 -87.3 153.7 -5.8 8.3 -4.6 20 20 A V E +A 14 0A 98 -6,-0.2 2,-0.3 -2,-0.2 -6,-0.2 -0.913 35.6 168.6-104.2 122.0 -5.1 4.9 -3.1 21 21 A Y E -A 13 0A 23 -8,-2.8 -8,-2.9 -2,-0.6 2,-0.6 -0.783 33.6-116.6-124.7 171.6 -1.5 4.0 -2.7 22 22 A F E -AB 12 31A 14 9,-3.4 9,-2.4 -2,-0.3 2,-0.4 -0.948 25.5-155.2-117.2 118.2 0.5 1.3 -0.8 23 23 A V E - B 0 30A 11 -12,-2.0 2,-0.7 -2,-0.6 -12,-0.4 -0.762 4.3-151.6 -96.8 131.7 2.8 2.4 1.9 24 24 A N E >> - B 0 29A 19 5,-2.4 4,-1.7 -2,-0.4 5,-0.6 -0.921 3.4-165.7-101.1 115.9 5.8 0.3 2.9 25 25 A H T 45S+ 0 0 104 -16,-3.1 -1,-0.1 -2,-0.7 -15,-0.1 0.824 85.3 55.4 -67.0 -32.7 6.6 0.9 6.6 26 26 A N T 45S+ 0 0 119 1,-0.2 -1,-0.2 -18,-0.1 -17,-0.1 0.987 124.7 18.3 -66.5 -61.2 10.0 -0.7 6.3 27 27 A T T 45S- 0 0 85 2,-0.1 -1,-0.2 -18,-0.0 -2,-0.2 0.619 98.2-128.0 -87.3 -13.9 11.5 1.3 3.4 28 28 A R T <5 + 0 0 199 -4,-1.7 2,-0.4 1,-0.2 -3,-0.2 0.798 54.5 158.7 66.1 33.3 9.0 4.2 3.8 29 29 A I E < -B 24 0A 89 -5,-0.6 -5,-2.4 1,-0.0 2,-0.9 -0.705 40.0-145.4 -94.5 134.6 8.3 3.8 0.1 30 30 A T E +B 23 0A 74 -2,-0.4 2,-0.2 -7,-0.2 -7,-0.2 -0.832 29.3 175.1 -98.1 96.3 5.1 5.1 -1.4 31 31 A Q E -B 22 0A 61 -9,-2.4 -9,-3.4 -2,-0.9 -2,-0.0 -0.677 25.3-162.2-101.6 158.7 4.2 2.7 -4.2 32 32 A W + 0 0 129 -2,-0.2 2,-0.1 -11,-0.2 -1,-0.1 0.675 62.0 94.6-112.0 -29.3 1.1 2.7 -6.3 33 33 A E S S- 0 0 126 -11,-0.1 -2,-0.1 1,-0.1 -11,-0.1 -0.444 82.7-110.9 -67.8 140.0 1.1 -0.8 -7.7 34 34 A D - 0 0 67 1,-0.1 3,-0.4 -2,-0.1 -1,-0.1 -0.617 23.6-168.4 -80.0 120.7 -1.0 -3.3 -5.8 35 35 A P S S+ 0 0 40 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 0.694 83.1 69.8 -76.6 -21.7 1.0 -6.0 -4.0 36 36 A R 0 0 85 -32,-0.1 -33,-0.2 -29,-0.0 -2,-0.1 -0.171 360.0 360.0 -91.8 42.7 -2.2 -8.0 -3.2 37 37 A S 0 0 159 -3,-0.4 -1,-0.0 -2,-0.4 -4,-0.0 -0.851 360.0 360.0-106.1 360.0 -2.6 -8.9 -6.9