==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 01-FEB-05 1YQA . COMPND 2 MOLECULE: HISTONE H1; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR A.SANDERSON,K.STOTT,T.J.STEVENS,J.O.THOMAS . 87 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5396.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 56 64.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 5.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 36.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 171 A K 0 0 153 0, 0.0 2,-0.3 0, 0.0 19,-0.1 0.000 360.0 360.0 360.0-141.7 -12.5 -5.2 0.5 2 172 A A - 0 0 42 14,-0.1 2,-0.1 1,-0.1 18,-0.1 -0.487 360.0-123.8 -69.0 125.5 -11.2 -5.2 -3.1 3 173 A S - 0 0 102 -2,-0.3 -1,-0.1 1,-0.1 36,-0.0 -0.370 22.7-114.8 -69.6 145.7 -10.3 -8.7 -4.3 4 174 A S - 0 0 20 1,-0.1 -1,-0.1 -2,-0.1 9,-0.1 -0.691 27.7-148.8 -85.7 131.9 -6.7 -9.3 -5.5 5 175 A P - 0 0 54 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.440 20.8-104.7 -75.0-144.8 -6.3 -10.2 -9.2 6 176 A S S S+ 0 0 84 1,-0.1 34,-0.1 34,-0.1 33,-0.0 -0.995 78.6 26.5-151.7 156.2 -3.6 -12.5 -10.7 7 177 A S S S+ 0 0 111 -2,-0.3 2,-0.2 1,-0.2 -1,-0.1 0.760 78.1 141.6 60.7 36.6 -0.3 -12.6 -12.6 8 178 A L - 0 0 59 1,-0.1 -1,-0.2 2,-0.1 2,-0.1 -0.483 61.2 -86.0 -91.2 172.9 0.8 -9.1 -11.5 9 179 A T > - 0 0 80 -2,-0.2 4,-3.0 1,-0.1 5,-0.2 -0.378 40.6-111.9 -71.2 154.4 4.3 -8.0 -10.7 10 180 A Y H > S+ 0 0 67 1,-0.2 4,-1.9 2,-0.2 5,-0.2 0.892 122.7 53.1 -58.4 -32.4 5.3 -8.7 -7.1 11 181 A K H > S+ 0 0 56 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.965 110.6 44.2 -62.5 -53.6 5.3 -4.9 -6.7 12 182 A E H > S+ 0 0 72 1,-0.2 4,-1.7 2,-0.2 -2,-0.2 0.842 107.5 61.4 -61.8 -34.4 1.8 -4.6 -8.1 13 183 A M H X S+ 0 0 2 -4,-3.0 4,-1.8 2,-0.2 3,-0.2 0.942 111.0 38.2 -57.8 -47.4 0.7 -7.6 -6.0 14 184 A I H X S+ 0 0 1 -4,-1.9 4,-3.5 1,-0.2 -2,-0.2 0.911 111.7 58.5 -69.1 -42.5 1.5 -5.6 -2.8 15 185 A L H < S+ 0 0 11 -4,-2.7 -1,-0.2 1,-0.2 -2,-0.2 0.764 110.4 44.9 -59.5 -25.6 0.2 -2.3 -4.3 16 186 A K H < S+ 0 0 74 -4,-1.7 4,-0.4 -3,-0.2 -1,-0.2 0.851 118.2 41.0 -83.2 -41.2 -3.1 -4.1 -4.7 17 187 A S H >X S+ 0 0 0 -4,-1.8 4,-2.1 -5,-0.2 3,-0.6 0.805 102.4 70.3 -76.4 -34.9 -3.2 -5.7 -1.2 18 188 A M T 3< S+ 0 0 0 -4,-3.5 6,-1.1 1,-0.2 8,-0.3 0.928 96.2 49.6 -52.0 -54.9 -1.8 -2.6 0.6 19 189 A P T 34 S+ 0 0 42 0, 0.0 -1,-0.2 0, 0.0 4,-0.2 0.766 111.1 53.7 -58.8 -22.9 -4.9 -0.4 0.2 20 190 A Q T X4 S+ 0 0 22 -3,-0.6 3,-0.9 -4,-0.4 2,-0.7 0.921 95.6 74.0 -75.5 -44.8 -6.9 -3.4 1.5 21 191 A L G ><>S- 0 0 20 -4,-2.1 3,-1.7 1,-0.3 5,-0.7 -0.609 129.4 -23.7 -75.8 112.4 -4.8 -3.8 4.6 22 192 A N G > 5S- 0 0 98 -2,-0.7 3,-2.1 1,-0.3 -1,-0.3 0.857 117.7 -65.8 53.8 38.9 -5.7 -1.0 7.1 23 193 A D G < 5S- 0 0 130 -3,-0.9 -1,-0.3 1,-0.3 -3,-0.2 0.780 94.4 -59.5 53.3 33.5 -6.9 1.1 4.2 24 194 A G G < 5S+ 0 0 9 -3,-1.7 54,-0.8 -6,-1.1 -1,-0.3 0.621 109.4 122.9 73.7 14.9 -3.3 1.3 2.9 25 195 A K T < 5S- 0 0 158 -3,-2.1 2,-0.2 -4,-0.4 -3,-0.1 0.868 81.7 -73.7 -72.6 -38.7 -2.1 2.9 6.0 26 196 A G < - 0 0 2 -5,-0.7 2,-0.3 -8,-0.3 51,-0.3 -0.540 44.1-157.9 149.4 146.5 0.4 0.1 6.6 27 197 A S B -A 76 0A 3 49,-2.5 49,-2.7 -2,-0.2 5,-0.1 -0.996 31.3 -96.9-150.5 145.6 0.8 -3.5 7.7 28 198 A S > - 0 0 47 -2,-0.3 4,-3.0 47,-0.3 5,-0.2 -0.166 38.4-111.7 -57.9 152.1 3.5 -5.7 9.2 29 199 A R H > S+ 0 0 57 45,-0.3 4,-3.5 1,-0.2 5,-0.3 0.877 119.8 52.6 -56.1 -38.9 5.4 -8.0 6.8 30 200 A I H > S+ 0 0 113 2,-0.2 4,-2.9 1,-0.2 -1,-0.2 0.946 111.4 46.1 -62.1 -46.2 3.8 -11.0 8.3 31 201 A V H > S+ 0 0 60 2,-0.2 4,-1.7 1,-0.2 -2,-0.2 0.926 117.3 44.1 -60.5 -47.0 0.3 -9.5 7.8 32 202 A L H X S+ 0 0 0 -4,-3.0 4,-3.5 2,-0.2 5,-0.2 0.953 114.7 47.9 -64.1 -51.2 1.2 -8.5 4.2 33 203 A K H X S+ 0 0 49 -4,-3.5 4,-3.3 1,-0.2 5,-0.3 0.930 112.2 49.8 -56.3 -48.3 2.9 -11.8 3.4 34 204 A K H X S+ 0 0 123 -4,-2.9 4,-1.3 -5,-0.3 -1,-0.2 0.848 115.4 44.4 -58.2 -37.2 -0.0 -13.8 4.8 35 205 A Y H X S+ 0 0 48 -4,-1.7 4,-3.0 -5,-0.2 5,-0.4 0.922 114.1 47.7 -75.7 -45.7 -2.4 -11.6 2.8 36 206 A V H X S+ 0 0 0 -4,-3.5 4,-2.8 1,-0.2 7,-0.3 0.945 114.7 46.1 -60.7 -47.8 -0.4 -11.7 -0.4 37 207 A K H < S+ 0 0 45 -4,-3.3 7,-0.5 -5,-0.2 -1,-0.2 0.826 115.8 47.6 -64.8 -33.8 0.0 -15.5 -0.2 38 208 A D H < S+ 0 0 117 -4,-1.3 -2,-0.2 -5,-0.3 -1,-0.2 0.925 119.2 35.9 -73.7 -47.7 -3.7 -16.0 0.6 39 209 A T H < S+ 0 0 31 -4,-3.0 -2,-0.2 1,-0.2 -3,-0.2 0.831 120.9 50.1 -78.3 -30.7 -5.1 -13.8 -2.1 40 210 A Y >X - 0 0 2 -4,-2.8 4,-1.6 -5,-0.4 3,-0.9 -0.833 68.7-172.6-109.5 91.8 -2.4 -14.8 -4.6 41 211 A P H 3> S+ 0 0 82 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.757 82.5 62.8 -55.2 -26.6 -2.3 -18.6 -4.6 42 212 A I H 3> S+ 0 0 93 1,-0.2 4,-1.9 2,-0.2 7,-0.1 0.909 107.3 41.5 -69.2 -37.7 0.8 -18.6 -6.8 43 213 A V H <4 S+ 0 0 0 -3,-0.9 -1,-0.2 -7,-0.3 -6,-0.2 0.774 112.2 57.7 -79.5 -23.2 2.8 -16.8 -4.2 44 214 A G H < S+ 0 0 30 -4,-1.6 -2,-0.2 -7,-0.5 -1,-0.2 0.932 111.0 40.5 -69.3 -45.0 1.2 -19.0 -1.5 45 215 A S H < S+ 0 0 101 -4,-2.5 2,-0.5 -5,-0.1 -2,-0.2 0.870 101.1 85.7 -69.8 -38.9 2.4 -22.2 -3.2 46 216 A A < - 0 0 34 -4,-1.9 4,-0.3 -5,-0.2 -4,-0.0 -0.527 53.8-174.6 -70.1 120.9 5.8 -20.6 -4.0 47 217 A S S > S+ 0 0 101 -2,-0.5 3,-1.0 1,-0.2 4,-0.4 0.841 87.8 56.8 -80.7 -34.8 8.3 -20.9 -1.1 48 218 A N T >> S+ 0 0 105 1,-0.2 4,-1.6 2,-0.2 3,-0.9 0.732 88.9 81.2 -67.9 -20.8 10.8 -18.8 -3.0 49 219 A F H 3> S+ 0 0 2 1,-0.2 4,-3.1 2,-0.2 -1,-0.2 0.847 79.2 64.7 -48.0 -48.2 8.2 -16.1 -3.1 50 220 A D H <> S+ 0 0 48 -3,-1.0 4,-1.5 -4,-0.3 -1,-0.2 0.863 104.4 45.2 -54.6 -35.9 8.9 -15.0 0.4 51 221 A Y H <> S+ 0 0 150 -3,-0.9 4,-2.1 -4,-0.4 -1,-0.2 0.941 113.5 48.7 -70.0 -46.9 12.4 -13.9 -0.6 52 222 A L H X S+ 0 0 59 -4,-1.6 4,-2.8 1,-0.2 -2,-0.2 0.842 105.4 61.6 -61.4 -32.2 11.1 -12.1 -3.7 53 223 A F H X S+ 0 0 1 -4,-3.1 4,-1.9 2,-0.2 -1,-0.2 0.949 105.9 43.9 -57.5 -50.4 8.5 -10.5 -1.5 54 224 A N H X S+ 0 0 59 -4,-1.5 4,-2.2 1,-0.2 -2,-0.2 0.881 113.5 52.3 -63.7 -37.5 11.2 -8.8 0.6 55 225 A S H X S+ 0 0 51 -4,-2.1 4,-1.9 2,-0.2 -2,-0.2 0.885 106.3 53.6 -66.9 -38.3 13.0 -7.9 -2.7 56 226 A A H X S+ 0 0 14 -4,-2.8 4,-2.1 2,-0.2 -2,-0.2 0.917 109.5 47.6 -62.3 -44.2 9.9 -6.4 -4.1 57 227 A I H X S+ 0 0 8 -4,-1.9 4,-2.4 2,-0.2 9,-0.2 0.914 108.2 55.1 -64.0 -42.4 9.5 -4.1 -1.1 58 228 A K H X S+ 0 0 131 -4,-2.2 4,-1.0 1,-0.2 -1,-0.2 0.882 111.7 44.4 -57.4 -39.0 13.1 -3.1 -1.2 59 229 A K H X S+ 0 0 111 -4,-1.9 4,-1.3 1,-0.2 -1,-0.2 0.835 111.4 54.8 -73.3 -34.9 12.5 -2.0 -4.8 60 230 A C H X>S+ 0 0 0 -4,-2.1 5,-2.4 2,-0.2 4,-0.9 0.838 100.6 58.0 -66.4 -39.6 9.2 -0.3 -3.8 61 231 A V H <5S+ 0 0 59 -4,-2.4 3,-0.4 1,-0.2 -1,-0.2 0.911 110.4 42.0 -64.6 -39.1 10.8 1.9 -1.1 62 232 A E H <5S+ 0 0 129 -4,-1.0 -1,-0.2 1,-0.2 -2,-0.2 0.814 115.7 51.7 -72.7 -30.9 13.3 3.5 -3.5 63 233 A N H <5S- 0 0 60 -4,-1.3 -1,-0.2 -5,-0.1 -2,-0.2 0.595 111.6-123.6 -77.6 -16.9 10.4 3.8 -6.1 64 234 A G T <5S+ 0 0 8 -4,-0.9 16,-0.9 -3,-0.4 17,-0.7 0.650 82.2 115.6 76.5 19.4 8.2 5.4 -3.5 65 235 A E S