==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/APOPTOSIS 30-MAR-07 2YQK . COMPND 2 MOLECULE: ARGININE-GLUTAMIC ACID DIPEPTIDE REPEATS PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.KADIRVEL,F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TARADA, . 63 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6074.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 52.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 41.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 136 0, 0.0 2,-1.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -73.9 -19.2 31.0 21.0 2 2 A S + 0 0 130 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.758 360.0 172.8 -91.1 101.9 -17.0 28.3 19.4 3 3 A S - 0 0 122 -2,-1.0 2,-0.2 0, 0.0 0, 0.0 -0.769 8.6-169.5-109.2 154.5 -17.7 28.3 15.7 4 4 A G - 0 0 72 -2,-0.3 2,-0.2 2,-0.0 -2,-0.0 -0.763 6.3-148.6-133.3 179.5 -16.0 26.4 12.9 5 5 A S - 0 0 129 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.782 2.3-158.2-139.6-177.4 -15.8 26.2 9.1 6 6 A S + 0 0 117 -2,-0.2 2,-0.1 3,-0.0 -2,-0.0 -0.873 24.2 133.0-169.9 133.7 -15.1 23.7 6.3 7 7 A G - 0 0 64 -2,-0.3 2,-0.9 0, 0.0 -2,-0.0 -0.417 62.5 -5.8-148.7-135.0 -14.0 23.9 2.7 8 8 A I - 0 0 179 -2,-0.1 2,-0.2 2,-0.0 -2,-0.0 -0.671 67.6-179.3 -80.7 107.2 -11.6 22.3 0.2 9 9 A E - 0 0 164 -2,-0.9 2,-0.4 -3,-0.0 -3,-0.0 -0.569 16.9-137.6-102.8 168.1 -9.5 19.8 2.2 10 10 A K + 0 0 178 -2,-0.2 3,-0.1 1,-0.1 -2,-0.0 -0.977 36.0 143.1-129.8 141.7 -6.7 17.5 1.2 11 11 A C S S+ 0 0 103 -2,-0.4 2,-0.3 1,-0.3 -1,-0.1 0.500 71.2 4.5-138.0 -54.2 -5.9 13.9 2.1 12 12 A W - 0 0 56 4,-0.0 -1,-0.3 3,-0.0 2,-0.1 -0.999 61.4-143.2-145.4 139.6 -4.5 11.9 -0.8 13 13 A T > - 0 0 53 -2,-0.3 4,-1.7 -3,-0.1 5,-0.1 -0.358 30.2-107.8 -93.6 176.5 -3.5 12.9 -4.4 14 14 A E H > S+ 0 0 147 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.897 117.9 51.0 -71.1 -41.8 -3.9 10.9 -7.6 15 15 A D H > S+ 0 0 103 2,-0.2 4,-2.6 1,-0.2 5,-0.3 0.935 109.6 49.9 -61.2 -48.4 -0.2 10.2 -7.9 16 16 A E H > S+ 0 0 35 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.929 112.9 46.9 -56.5 -48.7 0.1 8.9 -4.3 17 17 A V H X S+ 0 0 40 -4,-1.7 4,-2.6 2,-0.2 5,-0.3 0.946 111.4 50.8 -59.2 -51.3 -2.9 6.6 -4.9 18 18 A K H X S+ 0 0 162 -4,-2.7 4,-2.6 1,-0.2 -2,-0.2 0.941 113.9 44.0 -52.1 -53.7 -1.6 5.2 -8.2 19 19 A R H X S+ 0 0 98 -4,-2.6 4,-2.6 1,-0.2 5,-0.2 0.915 110.6 56.3 -58.9 -45.2 1.8 4.4 -6.7 20 20 A F H X S+ 0 0 5 -4,-2.7 4,-2.6 -5,-0.3 -2,-0.2 0.945 111.5 41.7 -52.0 -55.0 0.2 2.9 -3.6 21 21 A V H X S+ 0 0 41 -4,-2.6 4,-2.3 1,-0.2 5,-0.3 0.935 112.9 53.6 -59.4 -48.9 -1.8 0.4 -5.6 22 22 A K H X S+ 0 0 112 -4,-2.6 4,-2.3 -5,-0.3 5,-0.2 0.867 113.1 44.9 -54.8 -38.4 1.1 -0.3 -8.0 23 23 A G H X>S+ 0 0 3 -4,-2.6 4,-2.5 2,-0.2 5,-1.2 0.890 111.4 50.6 -74.0 -40.6 3.2 -1.1 -5.0 24 24 A L H <5S+ 0 0 28 -4,-2.6 -2,-0.2 -5,-0.2 -1,-0.2 0.785 118.6 40.1 -67.4 -27.3 0.6 -3.2 -3.2 25 25 A R H <5S+ 0 0 204 -4,-2.3 -2,-0.2 -5,-0.2 -1,-0.2 0.833 121.8 40.6 -88.6 -38.2 0.1 -5.2 -6.4 26 26 A Q H <5S+ 0 0 155 -4,-2.3 -3,-0.2 -5,-0.3 -2,-0.2 0.967 136.4 12.3 -74.3 -56.7 3.7 -5.4 -7.4 27 27 A Y T <5S- 0 0 158 -4,-2.5 2,-0.4 -5,-0.2 -3,-0.2 0.951 88.0-161.4 -84.4 -73.5 5.2 -6.0 -3.9 28 28 A G < + 0 0 16 -5,-1.2 2,-1.2 2,-0.0 -1,-0.2 -0.971 59.6 18.2 132.0-121.3 2.4 -6.9 -1.6 29 29 A K S S+ 0 0 154 -2,-0.4 -5,-0.1 1,-0.2 0, 0.0 -0.709 94.6 91.2 -93.8 87.6 2.5 -6.7 2.2 30 30 A N >> + 0 0 81 -2,-1.2 4,-3.0 2,-0.0 3,-1.6 -0.041 30.0 157.3-171.5 50.0 5.5 -4.5 2.9 31 31 A F H 3> S+ 0 0 35 1,-0.3 4,-2.7 2,-0.2 5,-0.4 0.802 72.6 73.2 -52.0 -30.1 4.5 -0.9 3.2 32 32 A F H 3> S+ 0 0 140 1,-0.2 4,-0.5 2,-0.2 -1,-0.3 0.895 115.3 19.5 -52.0 -44.2 7.6 -0.4 5.3 33 33 A R H <> S+ 0 0 129 -3,-1.6 4,-1.5 2,-0.2 5,-0.3 0.845 120.9 60.5 -93.9 -43.6 9.7 -0.7 2.1 34 34 A I H X S+ 0 0 1 -4,-3.0 4,-2.2 1,-0.2 3,-0.2 0.877 110.2 44.3 -51.8 -41.4 7.0 0.0 -0.5 35 35 A R H < S+ 0 0 38 -4,-2.7 -1,-0.2 -5,-0.3 7,-0.2 0.875 106.0 60.0 -72.0 -38.8 6.6 3.4 1.1 36 36 A K H < S+ 0 0 105 -4,-0.5 -1,-0.2 -5,-0.4 -2,-0.2 0.770 117.8 32.8 -60.2 -25.5 10.3 4.0 1.3 37 37 A E H < S+ 0 0 140 -4,-1.5 -2,-0.2 -3,-0.2 -1,-0.2 0.716 131.7 32.6-101.0 -29.3 10.4 3.7 -2.4 38 38 A L S < S+ 0 0 33 -4,-2.2 -3,-0.2 -5,-0.3 -2,-0.1 0.919 139.1 1.5 -89.8 -74.5 7.0 5.2 -3.2 39 39 A L > + 0 0 21 -5,-0.2 3,-0.6 1,-0.1 -3,-0.1 -0.640 67.9 156.2-119.9 73.2 6.2 7.9 -0.7 40 40 A P T 3 S+ 0 0 75 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 0.667 76.1 58.3 -69.7 -16.9 9.3 8.0 1.6 41 41 A N T 3 S+ 0 0 148 -6,-0.2 -5,-0.1 -3,-0.1 -2,-0.1 0.750 98.1 72.4 -83.8 -26.5 8.3 11.6 2.5 42 42 A K S < S- 0 0 87 -3,-0.6 2,-0.4 -7,-0.2 3,-0.0 -0.048 90.5 -98.1 -77.3-175.2 4.9 10.6 3.8 43 43 A E >> - 0 0 141 1,-0.1 4,-1.1 0, 0.0 3,-1.0 -0.889 16.1-129.5-112.5 140.6 4.1 8.7 7.0 44 44 A T H 3> S+ 0 0 53 -2,-0.4 4,-2.8 1,-0.3 3,-0.2 0.846 106.6 66.9 -52.3 -36.2 3.5 5.0 7.4 45 45 A G H 3> S+ 0 0 28 1,-0.2 4,-2.7 2,-0.2 5,-0.3 0.908 96.3 52.9 -52.3 -47.1 0.4 5.8 9.3 46 46 A E H <> S+ 0 0 94 -3,-1.0 4,-2.4 1,-0.2 -1,-0.2 0.897 111.6 46.7 -56.5 -42.9 -1.3 7.3 6.3 47 47 A L H X S+ 0 0 4 -4,-1.1 4,-3.0 -3,-0.2 5,-0.2 0.959 112.5 48.4 -64.8 -52.7 -0.6 4.2 4.3 48 48 A I H X S+ 0 0 75 -4,-2.8 4,-2.6 1,-0.2 5,-0.2 0.956 116.5 42.0 -52.2 -58.0 -1.8 1.8 7.0 49 49 A T H X S+ 0 0 89 -4,-2.7 4,-2.6 1,-0.2 5,-0.3 0.921 114.1 52.7 -56.7 -47.1 -5.1 3.7 7.6 50 50 A F H X S+ 0 0 43 -4,-2.4 4,-2.8 -5,-0.3 -1,-0.2 0.918 110.9 47.1 -55.6 -46.6 -5.5 4.2 3.8 51 51 A Y H X S+ 0 0 34 -4,-3.0 4,-2.1 2,-0.2 -1,-0.2 0.932 111.1 50.8 -61.8 -47.7 -5.2 0.5 3.2 52 52 A Y H X S+ 0 0 167 -4,-2.6 4,-1.3 -5,-0.2 5,-0.4 0.899 115.6 42.6 -57.4 -43.0 -7.6 -0.4 6.0 53 53 A Y H < S+ 0 0 192 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.880 113.2 51.9 -71.6 -39.4 -10.2 2.0 4.6 54 54 A W H < S+ 0 0 121 -4,-2.8 -2,-0.2 -5,-0.3 -1,-0.2 0.779 109.7 51.3 -67.8 -26.8 -9.5 0.9 1.0 55 55 A K H < S- 0 0 130 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.818 94.7-152.4 -79.2 -32.7 -10.0 -2.7 2.1 56 56 A K < - 0 0 127 -4,-1.3 -3,-0.1 -5,-0.2 -2,-0.1 0.979 7.0-154.3 55.9 84.4 -13.3 -2.0 3.8 57 57 A T S S+ 0 0 142 -5,-0.4 -1,-0.1 1,-0.2 -4,-0.1 0.785 93.1 57.9 -57.2 -27.4 -13.5 -4.7 6.6 58 58 A S S S- 0 0 104 1,-0.1 -1,-0.2 3,-0.0 -2,-0.1 0.969 88.3-177.1 -68.2 -55.5 -17.3 -4.3 6.4 59 59 A G - 0 0 26 2,-0.0 2,-0.1 -3,-0.0 -2,-0.1 -0.188 39.2 -24.3 83.1-179.1 -17.7 -5.1 2.7 60 60 A P - 0 0 139 0, 0.0 2,-0.2 0, 0.0 3,-0.1 -0.436 64.5-166.4 -69.7 137.4 -20.8 -5.1 0.5 61 61 A S - 0 0 108 1,-0.2 -2,-0.0 -2,-0.1 -3,-0.0 -0.700 32.7 -66.2-119.7 172.5 -24.1 -5.6 2.2 62 62 A S 0 0 127 -2,-0.2 -1,-0.2 1,-0.1 0, 0.0 -0.051 360.0 360.0 -53.2 158.7 -27.7 -6.3 1.2 63 63 A G 0 0 133 -3,-0.1 -1,-0.1 0, 0.0 -2,-0.0 0.316 360.0 360.0-146.2 360.0 -29.6 -3.8 -0.9