==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 02-APR-07 2YRA . COMPND 2 MOLECULE: SEIZURE 6-LIKE PROTEIN ISOFORM 3; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 74 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5855.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 30 40.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 20.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 738 A G 0 0 135 0, 0.0 2,-0.8 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 69.0 -36.4 -2.5 -2.5 2 739 A S + 0 0 123 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.778 360.0 115.6-107.9 88.2 -34.3 0.5 -1.4 3 740 A S + 0 0 123 -2,-0.8 0, 0.0 1,-0.0 0, 0.0 -0.965 26.5 166.6-155.5 135.0 -31.6 -0.9 0.9 4 741 A G + 0 0 57 -2,-0.3 3,-0.1 1,-0.0 -1,-0.0 0.474 19.7 145.5-112.0-107.2 -27.8 -1.0 0.7 5 742 A S + 0 0 139 1,-0.2 2,-0.4 0, 0.0 -1,-0.0 0.898 43.5 138.8 64.8 41.5 -25.4 -1.8 3.6 6 743 A S + 0 0 55 22,-0.0 -1,-0.2 0, 0.0 2,-0.2 -0.968 13.8 116.6-122.6 133.3 -23.0 -3.6 1.2 7 744 A G - 0 0 23 -2,-0.4 20,-0.2 20,-0.2 19,-0.1 -0.778 60.1 -83.8 171.7 142.8 -19.2 -3.4 1.3 8 745 A a - 0 0 11 -2,-0.2 2,-0.4 1,-0.1 18,-0.2 0.127 55.7 -94.7 -46.8 170.3 -16.0 -5.4 1.8 9 746 A S - 0 0 85 45,-0.4 -1,-0.1 1,-0.1 47,-0.1 -0.769 45.8 -90.7 -97.4 138.4 -14.8 -6.0 5.3 10 747 A D - 0 0 141 -2,-0.4 -1,-0.1 1,-0.1 0, 0.0 -0.174 48.9-118.5 -46.3 123.9 -12.1 -3.7 6.9 11 748 A L - 0 0 15 1,-0.1 -1,-0.1 -3,-0.0 3,-0.1 -0.386 30.0-104.3 -69.4 144.1 -8.7 -5.2 6.1 12 749 A P - 0 0 87 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.391 45.7 -87.5 -69.8 143.7 -6.5 -6.3 9.1 13 750 A E - 0 0 172 -2,-0.1 2,-0.3 1,-0.1 5,-0.1 -0.218 45.8-138.9 -52.1 133.5 -3.6 -4.1 10.0 14 751 A I > - 0 0 28 3,-0.3 3,-0.8 -3,-0.1 2,-0.3 -0.774 11.9-119.3-100.8 143.8 -0.5 -5.0 8.1 15 752 A Q T 3 S+ 0 0 140 -2,-0.3 48,-0.4 1,-0.3 3,-0.1 -0.618 93.8 3.3 -82.5 136.4 3.0 -5.2 9.6 16 753 A N T 3 S+ 0 0 68 -2,-0.3 21,-1.9 1,-0.2 2,-0.3 0.865 128.0 60.2 58.7 37.4 5.7 -2.9 8.1 17 754 A G E < -A 36 0A 11 -3,-0.8 2,-0.3 19,-0.3 -3,-0.3 -0.971 63.4-144.9-178.2 166.4 3.1 -1.4 5.9 18 755 A W E -A 35 0A 135 17,-2.7 17,-2.0 -2,-0.3 2,-0.3 -0.994 19.9-119.9-147.5 150.5 -0.2 0.5 5.6 19 756 A K E -A 34 0A 58 -2,-0.3 2,-0.4 15,-0.2 15,-0.2 -0.636 21.4-165.8 -91.5 148.9 -3.2 0.6 3.3 20 757 A T + 0 0 55 13,-1.7 13,-0.5 -2,-0.3 2,-0.4 -0.930 13.3 165.9-139.9 113.4 -4.3 3.7 1.4 21 758 A T - 0 0 53 -2,-0.4 11,-0.1 1,-0.2 9,-0.0 -0.964 33.4-140.7-129.1 145.1 -7.7 4.1 -0.3 22 759 A S S S+ 0 0 132 9,-0.4 2,-0.4 -2,-0.4 -1,-0.2 0.991 91.5 51.9 -64.1 -63.5 -9.5 7.2 -1.7 23 760 A H S S- 0 0 109 1,-0.2 4,-0.1 8,-0.1 -1,-0.1 -0.647 70.5-155.9 -80.8 125.9 -13.1 6.3 -0.5 24 761 A T S S+ 0 0 122 -2,-0.4 2,-0.6 2,-0.1 -1,-0.2 0.968 78.3 72.9 -63.8 -55.3 -13.3 5.5 3.2 25 762 A E S S- 0 0 136 1,-0.1 2,-0.6 -18,-0.0 -17,-0.1 -0.499 89.9-128.6 -66.8 111.7 -16.4 3.4 2.9 26 763 A L + 0 0 30 -2,-0.6 2,-0.3 -18,-0.2 -1,-0.1 -0.486 44.7 161.1 -65.8 111.1 -15.4 0.1 1.3 27 764 A V > - 0 0 57 -2,-0.6 3,-2.2 -20,-0.2 23,-0.3 -0.798 47.3 -62.5-128.1 170.6 -17.8 -0.4 -1.6 28 765 A R T 3 S+ 0 0 134 1,-0.3 23,-0.1 -2,-0.3 3,-0.1 -0.249 123.3 19.5 -53.9 132.7 -18.0 -2.4 -4.9 29 766 A G T 3 S+ 0 0 52 21,-1.2 -1,-0.3 1,-0.3 22,-0.1 0.054 88.4 145.1 94.2 -26.2 -15.2 -1.4 -7.2 30 767 A A < - 0 0 14 -3,-2.2 20,-1.1 19,-0.1 2,-0.5 -0.081 40.2-143.7 -46.0 142.6 -13.1 0.1 -4.4 31 768 A R E -B 49 0B 155 18,-0.2 -9,-0.4 -3,-0.1 2,-0.3 -0.963 9.4-157.6-119.7 122.9 -9.4 -0.3 -4.9 32 769 A I E -B 48 0B 2 16,-2.6 16,-1.5 -2,-0.5 2,-0.5 -0.764 3.4-154.1 -99.9 143.4 -7.0 -0.9 -2.0 33 770 A T E -B 47 0B 52 -13,-0.5 -13,-1.7 -2,-0.3 2,-0.6 -0.968 2.4-153.9-121.1 126.0 -3.3 -0.1 -2.1 34 771 A Y E -A 19 0A 8 12,-1.8 2,-0.4 -2,-0.5 -15,-0.2 -0.864 14.8-177.8-101.7 121.5 -0.7 -1.9 0.1 35 772 A Q E -A 18 0A 95 -17,-2.0 -17,-2.7 -2,-0.6 2,-0.2 -0.971 3.4-168.4-122.5 130.3 2.5 -0.0 0.9 36 773 A b E -A 17 0A 27 -2,-0.4 -19,-0.3 -19,-0.3 -20,-0.1 -0.565 36.7 -71.0-108.6 174.2 5.4 -1.4 3.0 37 774 A D > - 0 0 56 -21,-1.9 3,-1.5 -2,-0.2 2,-0.5 -0.131 64.3 -82.6 -60.8 159.7 8.5 0.2 4.5 38 775 A P T 3 S+ 0 0 121 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.530 117.0 26.4 -69.8 114.5 11.3 1.4 2.3 39 776 A G T 3 S+ 0 0 46 1,-0.5 27,-0.6 -2,-0.5 2,-0.1 0.087 101.3 95.4 122.0 -22.2 13.5 -1.5 1.4 40 777 A Y E < -C 65 0C 99 -3,-1.5 -1,-0.5 25,-0.2 2,-0.3 -0.391 61.6-135.5 -94.4 174.4 11.0 -4.3 1.7 41 778 A D E -C 64 0C 90 23,-2.8 23,-2.8 -2,-0.1 2,-0.4 -0.931 12.6-120.0-131.9 155.4 8.9 -6.0 -1.0 42 779 A I E -C 63 0C 38 -2,-0.3 2,-0.6 21,-0.2 21,-0.2 -0.756 17.0-149.8 -97.4 141.0 5.3 -7.1 -1.2 43 780 A V E -C 62 0C 53 19,-1.8 19,-0.5 -2,-0.4 2,-0.4 -0.917 65.4 -0.1-114.1 109.5 4.3 -10.7 -1.8 44 781 A G S S- 0 0 71 -2,-0.6 2,-0.7 17,-0.2 3,-0.1 -0.977 116.9 -2.0 125.9-131.1 1.0 -11.3 -3.7 45 782 A S - 0 0 66 -2,-0.4 -2,-0.1 14,-0.3 13,-0.1 -0.890 47.2-165.7-107.9 108.5 -1.3 -8.7 -5.1 46 783 A D S S+ 0 0 95 -2,-0.7 -12,-1.8 -4,-0.1 2,-0.5 0.817 82.6 50.2 -58.5 -31.2 -0.3 -5.1 -4.3 47 784 A T E S-B 33 0B 43 -14,-0.2 2,-0.4 -3,-0.1 -14,-0.2 -0.938 70.0-170.0-115.5 131.4 -3.8 -4.0 -5.4 48 785 A L E -B 32 0B 5 -16,-1.5 -16,-2.6 -2,-0.5 2,-0.3 -0.976 4.1-164.6-123.7 127.6 -7.0 -5.6 -4.1 49 786 A T E -B 31 0B 48 -2,-0.4 8,-1.2 -18,-0.2 2,-0.6 -0.713 24.8-111.6-107.8 159.6 -10.5 -5.0 -5.4 50 787 A a B -D 56 0D 8 -20,-1.1 -21,-1.2 -23,-0.3 6,-0.2 -0.809 31.9-146.7 -94.5 119.1 -13.9 -5.7 -4.0 51 788 A Q > - 0 0 94 4,-1.0 3,-1.4 -2,-0.6 -43,-0.1 -0.107 32.3 -98.0 -73.6 176.8 -15.8 -8.4 -5.8 52 789 A W T 3 S+ 0 0 194 1,-0.3 -1,-0.1 2,-0.1 -24,-0.1 0.565 123.6 62.1 -73.4 -7.7 -19.6 -8.5 -6.2 53 790 A D T 3 S- 0 0 94 2,-0.3 -1,-0.3 0, 0.0 3,-0.1 0.211 117.0-112.0-100.9 12.9 -19.7 -10.9 -3.3 54 791 A L S < S+ 0 0 55 -3,-1.4 2,-0.4 1,-0.2 -45,-0.4 0.781 84.1 118.0 61.8 26.9 -18.2 -8.3 -0.9 55 792 A S - 0 0 53 -47,-0.1 -4,-1.0 2,-0.0 -2,-0.3 -0.989 69.8-115.7-130.4 127.3 -15.1 -10.5 -0.8 56 793 A W B -D 50 0D 36 -2,-0.4 -6,-0.2 -6,-0.2 3,-0.0 -0.269 33.5-109.9 -58.4 140.6 -11.6 -9.4 -1.9 57 794 A S S S- 0 0 81 -8,-1.2 2,-0.3 1,-0.1 -1,-0.1 0.854 94.4 -15.6 -37.1 -48.0 -10.3 -11.5 -4.9 58 795 A S S S- 0 0 80 1,-0.1 -1,-0.1 -13,-0.1 -2,-0.0 -0.966 91.3 -63.4-154.7 167.0 -7.8 -13.0 -2.4 59 796 A D - 0 0 151 -2,-0.3 -14,-0.3 1,-0.1 -1,-0.1 -0.050 66.6 -87.8 -51.6 155.8 -6.2 -12.6 1.0 60 797 A P - 0 0 40 0, 0.0 -1,-0.1 0, 0.0 -14,-0.1 -0.367 42.8-121.3 -69.8 145.3 -4.1 -9.5 1.7 61 798 A P - 0 0 13 0, 0.0 2,-0.3 0, 0.0 -17,-0.2 0.189 24.8-139.1 -69.9-165.3 -0.4 -9.6 0.8 62 799 A F E -C 43 0C 98 -19,-0.5 -19,-1.8 -48,-0.1 2,-0.4 -0.950 15.3 -99.4-153.7 170.5 2.5 -9.0 3.2 63 800 A b E -C 42 0C 16 -48,-0.4 2,-0.4 -2,-0.3 -21,-0.2 -0.831 34.3-174.3-101.9 135.0 5.9 -7.3 3.6 64 801 A E E -C 41 0C 108 -23,-2.8 -23,-2.8 -2,-0.4 2,-0.3 -0.975 23.9-119.5-130.4 143.0 9.2 -9.2 3.2 65 802 A K E -C 40 0C 97 -2,-0.4 2,-0.3 -25,-0.2 -25,-0.2 -0.586 26.7-139.6 -81.3 139.2 12.8 -8.2 3.7 66 803 A T - 0 0 64 -27,-0.6 2,-1.6 -2,-0.3 -1,-0.0 -0.728 27.0-100.8-100.1 148.9 15.1 -8.4 0.7 67 804 A E S S+ 0 0 180 -2,-0.3 2,-0.3 2,-0.0 -1,-0.0 -0.485 74.7 127.2 -68.9 89.0 18.7 -9.6 0.8 68 805 A E - 0 0 101 -2,-1.6 2,-0.5 -29,-0.0 -2,-0.0 -0.998 43.6-157.7-147.9 147.0 20.5 -6.2 0.7 69 806 A S - 0 0 105 -2,-0.3 3,-0.1 1,-0.2 -2,-0.0 -0.938 62.6 -14.5-131.2 110.6 23.1 -4.4 2.8 70 807 A G S S- 0 0 44 -2,-0.5 -1,-0.2 1,-0.1 3,-0.0 0.104 79.8 -85.1 84.0 159.2 23.4 -0.7 2.8 71 808 A P S S+ 0 0 137 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 0.822 114.9 48.6 -69.7 -32.7 21.8 1.9 0.4 72 809 A S S S- 0 0 92 1,-0.1 -3,-0.0 -3,-0.1 0, 0.0 -0.931 81.2-132.2-115.2 133.9 24.7 1.6 -2.1 73 810 A S 0 0 131 -2,-0.4 -1,-0.1 1,-0.2 -4,-0.1 0.921 360.0 360.0 -43.7 -57.6 26.1 -1.7 -3.4 74 811 A G 0 0 113 -3,-0.1 -1,-0.2 -4,-0.0 -4,-0.0 -0.010 360.0 360.0 88.0 360.0 29.6 -0.7 -2.7