==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN TRANSPORT 02-APR-07 2YRC . COMPND 2 MOLECULE: PROTEIN TRANSPORT PROTEIN SEC23A; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 59 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4945.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 25 42.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 16.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 50 A G 0 0 121 0, 0.0 2,-0.4 0, 0.0 47,-0.1 0.000 360.0 360.0 360.0-162.9 18.8 0.0 -0.7 2 51 A S - 0 0 71 2,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.959 360.0-130.9-138.3 117.8 18.5 -3.7 0.2 3 52 A S + 0 0 126 -2,-0.4 2,-0.1 2,-0.1 0, 0.0 0.137 64.0 67.8 -52.8 177.4 20.7 -6.5 -1.1 4 53 A G S S- 0 0 69 1,-0.0 2,-0.6 2,-0.0 -2,-0.1 -0.301 88.3 -69.2 97.4 175.8 19.2 -9.7 -2.4 5 54 A S S S+ 0 0 117 -2,-0.1 2,-0.3 2,-0.0 -2,-0.1 -0.927 71.3 121.2-114.7 111.9 17.1 -10.4 -5.5 6 55 A S + 0 0 118 -2,-0.6 -2,-0.0 1,-0.1 0, 0.0 -0.970 23.0 165.1-158.5 168.4 13.5 -9.1 -5.6 7 56 A G + 0 0 76 -2,-0.3 -1,-0.1 2,-0.0 42,-0.0 0.208 22.2 159.3 178.5 34.7 11.2 -6.9 -7.6 8 57 A E - 0 0 169 1,-0.1 2,-0.2 3,-0.0 3,-0.0 -0.482 46.3-107.9 -74.1 139.3 7.6 -7.5 -6.5 9 58 A P - 0 0 83 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.480 33.7-113.3 -69.8 129.8 5.1 -4.7 -7.3 10 59 A V - 0 0 30 -2,-0.2 11,-1.7 11,-0.1 2,-0.4 -0.475 36.2-167.5 -66.7 123.1 3.9 -2.7 -4.2 11 60 A L B -A 20 0A 60 -2,-0.3 9,-0.2 9,-0.2 7,-0.1 -0.951 32.4 -95.8-118.4 132.9 0.2 -3.4 -3.6 12 61 A C - 0 0 2 7,-1.0 6,-0.6 -2,-0.4 5,-0.1 -0.134 34.1-127.8 -44.3 125.9 -2.0 -1.4 -1.2 13 62 A S S S+ 0 0 94 4,-0.1 -1,-0.1 28,-0.1 30,-0.1 0.923 84.7 96.0 -41.6 -63.2 -2.1 -3.2 2.1 14 63 A R > - 0 0 126 1,-0.2 4,-2.3 2,-0.1 5,-0.2 0.001 68.4-150.5 -34.6 122.1 -5.9 -3.2 2.2 15 64 A T T 4 S+ 0 0 116 1,-0.2 -1,-0.2 2,-0.2 -3,-0.0 0.883 96.9 51.0 -68.0 -39.4 -7.0 -6.5 0.8 16 65 A T T 4 S+ 0 0 115 1,-0.1 -1,-0.2 2,-0.0 -2,-0.1 0.753 117.1 42.4 -69.6 -24.2 -10.3 -5.1 -0.5 17 66 A C T 4 + 0 0 31 -5,-0.1 -2,-0.2 2,-0.1 3,-0.1 0.954 64.4 165.9 -84.6 -68.7 -8.3 -2.4 -2.2 18 67 A R < + 0 0 160 -4,-2.3 2,-0.7 -6,-0.6 -3,-0.1 0.868 22.0 165.5 51.4 39.7 -5.2 -4.1 -3.7 19 68 A A - 0 0 17 -5,-0.2 -7,-1.0 1,-0.0 -1,-0.2 -0.793 38.9-121.6 -92.6 112.1 -4.7 -0.9 -5.8 20 69 A V B -A 11 0A 76 -2,-0.7 -9,-0.2 -9,-0.2 -1,-0.0 -0.187 44.0 -84.9 -50.8 136.3 -1.2 -0.9 -7.3 21 70 A L - 0 0 8 -11,-1.7 -1,-0.2 2,-0.1 33,-0.1 -0.193 58.8-172.8 -47.1 121.6 0.8 2.2 -6.2 22 71 A N > - 0 0 24 -3,-0.2 3,-1.0 1,-0.0 -1,-0.1 -0.840 38.4-117.3-121.4 158.8 -0.1 5.0 -8.6 23 72 A P T 3 S+ 0 0 87 0, 0.0 4,-0.2 0, 0.0 36,-0.1 0.522 110.8 67.9 -69.8 -4.3 1.2 8.6 -9.1 24 73 A L T 3 S+ 0 0 123 2,-0.1 -3,-0.1 35,-0.0 3,-0.0 0.799 79.9 93.8 -84.8 -31.8 -2.3 9.8 -8.1 25 74 A C S < S- 0 0 6 -3,-1.0 2,-1.1 1,-0.1 11,-0.2 -0.091 92.0 -98.5 -57.7 160.7 -1.9 8.7 -4.5 26 75 A Q E -B 35 0B 133 9,-1.6 9,-2.5 2,-0.1 2,-0.6 -0.716 40.8-163.7 -88.3 96.1 -0.7 11.1 -1.8 27 76 A V E -B 34 0B 35 -2,-1.1 2,-0.7 7,-0.3 7,-0.3 -0.705 8.5-165.2 -84.4 120.2 3.0 10.4 -1.4 28 77 A D E > > +B 33 0B 81 5,-2.4 3,-1.6 -2,-0.6 5,-1.1 -0.511 13.2 173.2-102.8 63.2 4.5 11.9 1.7 29 78 A Y G > 5S+ 0 0 147 -2,-0.7 3,-1.4 1,-0.3 -1,-0.2 0.814 78.0 63.2 -37.0 -39.2 8.2 11.5 0.9 30 79 A R G 3 5S+ 0 0 241 1,-0.3 -1,-0.3 -3,-0.2 -2,-0.1 0.936 116.4 26.5 -54.3 -51.2 8.8 13.5 4.0 31 80 A A G < 5S- 0 0 45 -3,-1.6 -1,-0.3 2,-0.2 -2,-0.2 0.058 107.4-122.4-100.8 23.5 7.3 10.8 6.2 32 81 A K T < 5S+ 0 0 127 -3,-1.4 13,-1.0 -4,-0.5 2,-0.4 0.841 75.9 121.0 36.6 45.6 8.1 8.0 3.7 33 82 A L E < -BC 28 44B 33 -5,-1.1 -5,-2.4 11,-0.2 2,-0.6 -0.979 47.3-163.8-141.7 125.9 4.4 7.3 3.6 34 83 A W E -BC 27 43B 5 9,-1.6 9,-1.1 -2,-0.4 -7,-0.3 -0.933 13.9-147.5-113.7 116.0 2.0 7.3 0.7 35 84 A A E -BC 26 42B 19 -9,-2.5 -9,-1.6 -2,-0.6 7,-0.3 -0.535 25.2-106.7 -80.9 145.4 -1.7 7.3 1.3 36 85 A C - 0 0 1 5,-2.1 -1,-0.1 -2,-0.2 -15,-0.0 -0.343 13.4-146.8 -69.7 150.6 -4.1 5.6 -1.1 37 86 A N S S+ 0 0 57 3,-0.1 -1,-0.1 2,-0.1 -2,-0.0 0.611 95.2 33.4 -91.9 -15.4 -6.3 7.7 -3.3 38 87 A F S S+ 0 0 135 3,-0.1 -2,-0.0 -19,-0.1 -3,-0.0 0.833 132.1 22.2-101.2 -75.1 -9.2 5.2 -3.2 39 88 A C S S- 0 0 43 2,-0.1 -2,-0.1 -25,-0.1 -4,-0.0 0.753 97.1-134.8 -67.1 -24.0 -9.4 3.5 0.1 40 89 A Y + 0 0 180 1,-0.2 2,-0.4 -5,-0.0 -3,-0.1 0.963 50.2 148.3 67.3 53.7 -7.5 6.4 1.6 41 90 A Q - 0 0 91 -7,-0.1 -5,-2.1 -27,-0.0 2,-0.3 -0.963 48.0-120.6-123.9 138.5 -5.1 4.3 3.7 42 91 A R E -C 35 0B 165 -2,-0.4 2,-0.3 -7,-0.3 -7,-0.2 -0.577 32.6-172.6 -77.8 133.3 -1.5 5.1 4.7 43 92 A N E -C 34 0B 13 -9,-1.1 -9,-1.6 -2,-0.3 2,-0.3 -0.950 21.1-120.7-128.7 148.4 1.1 2.5 3.5 44 93 A Q E -C 33 0B 167 -2,-0.3 -11,-0.2 -11,-0.2 -12,-0.1 -0.633 35.3-104.5 -88.2 144.2 4.8 2.1 4.2 45 94 A F - 0 0 37 -13,-1.0 -1,-0.1 -2,-0.3 4,-0.1 -0.268 41.0-103.7 -65.0 150.9 7.4 2.2 1.3 46 95 A P - 0 0 26 0, 0.0 3,-0.3 0, 0.0 -1,-0.1 -0.121 26.0-109.4 -69.8 169.8 8.9 -1.1 0.2 47 96 A P S S+ 0 0 97 0, 0.0 2,-0.6 0, 0.0 -2,-0.1 0.841 110.9 40.4 -69.7 -35.0 12.4 -2.3 1.0 48 97 A S + 0 0 55 -47,-0.1 3,-0.1 1,-0.1 -45,-0.0 -0.861 61.2 147.4-121.6 96.6 13.7 -1.8 -2.6 49 98 A Y + 0 0 98 -2,-0.6 3,-0.2 -3,-0.3 7,-0.1 -0.238 47.7 93.1-120.7 42.8 12.3 1.3 -4.2 50 99 A A S S+ 0 0 85 1,-0.1 2,-0.4 5,-0.1 6,-0.1 0.823 81.2 49.8 -99.8 -45.3 15.3 2.2 -6.4 51 100 A G S S+ 0 0 84 -3,-0.1 2,-0.5 4,-0.0 -1,-0.1 -0.146 86.1 117.6 -88.7 40.7 14.4 0.5 -9.7 52 101 A I > - 0 0 34 -2,-0.4 4,-2.6 -3,-0.2 5,-0.3 -0.939 49.2-163.8-113.8 124.0 10.9 2.1 -9.7 53 102 A S H > S+ 0 0 80 -2,-0.5 4,-2.7 1,-0.2 -1,-0.2 0.912 89.8 62.8 -68.3 -44.0 9.8 4.5 -12.4 54 103 A E H 4 S+ 0 0 86 2,-0.2 -1,-0.2 1,-0.2 -32,-0.0 0.882 118.9 27.3 -48.0 -43.9 6.9 5.8 -10.4 55 104 A L H 4 S+ 0 0 37 1,-0.1 -2,-0.2 3,-0.1 -1,-0.2 0.956 123.6 46.9 -83.5 -63.0 9.3 7.1 -7.9 56 105 A N H < S+ 0 0 123 -4,-2.6 -3,-0.2 -6,-0.1 -2,-0.2 0.913 112.7 57.1 -44.4 -54.0 12.5 7.7 -9.9 57 106 A Q S < S- 0 0 116 -4,-2.7 2,-0.0 -5,-0.3 -5,-0.0 -0.540 97.6-105.5 -83.6 147.7 10.5 9.5 -12.6 58 107 A P 0 0 122 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.306 360.0 360.0 -69.7 153.5 8.3 12.5 -11.8 59 108 A A 0 0 122 -4,-0.1 -5,-0.0 -36,-0.1 -4,-0.0 -0.224 360.0 360.0 -50.0 360.0 4.5 12.3 -11.6