==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 02-APR-07 2YRG . COMPND 2 MOLECULE: TRIPARTITE MOTIF-CONTAINING PROTEIN 5; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR X.R.QIN,F.HAYAHSI,S.YOKOYAMA,RIKEN STRUCTURAL . 59 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4936.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 29 49.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 15.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 138 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-131.9 -3.6 -14.8 -13.4 2 2 A S - 0 0 109 1,-0.1 3,-0.1 0, 0.0 0, 0.0 -0.977 360.0-148.6-147.0 129.5 -0.3 -12.9 -12.9 3 3 A S - 0 0 137 -2,-0.3 2,-0.2 1,-0.2 -1,-0.1 0.929 58.8-106.4 -60.3 -47.3 3.0 -14.0 -11.3 4 4 A G - 0 0 52 1,-0.1 -1,-0.2 3,-0.0 3,-0.2 -0.618 6.1-109.5 136.1 164.2 3.7 -10.5 -10.1 5 5 A S S S+ 0 0 124 1,-0.3 2,-0.5 -2,-0.2 -1,-0.1 0.849 104.2 33.0 -93.3 -43.7 5.9 -7.4 -10.7 6 6 A S + 0 0 72 1,-0.0 -1,-0.3 5,-0.0 2,-0.0 -0.941 59.4 158.2-121.0 111.3 8.2 -7.6 -7.7 7 7 A G + 0 0 76 -2,-0.5 -1,-0.0 -3,-0.2 3,-0.0 -0.428 37.2 107.3-129.1 59.8 9.1 -11.0 -6.3 8 8 A S > - 0 0 78 1,-0.1 3,-1.3 -2,-0.0 -2,-0.0 -0.998 58.1-146.4-140.8 135.3 12.3 -10.5 -4.3 9 9 A P T 3 S+ 0 0 105 0, 0.0 4,-0.1 0, 0.0 -1,-0.1 0.694 100.2 66.3 -69.8 -19.3 13.0 -10.5 -0.5 10 10 A E T 3 S+ 0 0 163 2,-0.1 2,-0.2 -3,-0.0 -3,-0.0 0.232 78.8 120.6 -86.8 14.2 15.7 -7.9 -1.1 11 11 A G S < S- 0 0 25 -3,-1.3 2,-0.6 1,-0.1 -5,-0.0 -0.566 82.0 -92.5 -82.6 143.6 13.0 -5.5 -2.1 12 12 A Q - 0 0 168 -2,-0.2 2,-1.0 1,-0.1 -1,-0.1 -0.349 41.7-139.1 -56.1 102.7 12.5 -2.2 -0.2 13 13 A K + 0 0 182 -2,-0.6 2,-0.5 -4,-0.1 -1,-0.1 -0.544 37.2 161.3 -70.3 102.2 9.9 -3.2 2.3 14 14 A V S S- 0 0 63 -2,-1.0 10,-0.6 1,-0.1 41,-0.1 -0.928 70.2 -29.4-130.4 108.6 7.5 -0.2 2.4 15 15 A D S S- 0 0 104 -2,-0.5 9,-2.3 1,-0.2 2,-0.4 0.918 81.9-175.0 53.2 47.9 4.0 -0.5 3.7 16 16 A H B -A 23 0A 69 7,-0.2 7,-0.3 1,-0.1 -1,-0.2 -0.636 32.7-106.9 -79.4 124.8 3.9 -4.2 2.7 17 17 A C > - 0 0 13 5,-3.2 4,-1.3 -2,-0.4 -1,-0.1 -0.281 20.4-150.7 -52.6 120.0 0.5 -5.8 3.3 18 18 A A T 4 S+ 0 0 112 1,-0.2 -1,-0.2 2,-0.2 -2,-0.0 0.524 96.3 51.5 -71.5 -4.3 0.9 -8.1 6.3 19 19 A R T 4 S+ 0 0 173 3,-0.1 -1,-0.2 0, 0.0 -2,-0.1 0.840 133.6 4.2 -97.6 -46.4 -1.9 -10.2 4.7 20 20 A H T 4 S- 0 0 62 2,-0.2 -2,-0.2 0, 0.0 -4,-0.0 0.724 91.3-124.9-108.7 -36.3 -0.6 -10.7 1.1 21 21 A G < + 0 0 32 -4,-1.3 2,-0.3 1,-0.3 -3,-0.1 0.520 61.3 138.1 100.3 8.1 2.8 -9.0 1.4 22 22 A E - 0 0 62 -6,-0.1 -5,-3.2 1,-0.1 -1,-0.3 -0.635 63.4 -96.5 -89.2 145.2 2.2 -6.6 -1.5 23 23 A K B -A 16 0A 68 -2,-0.3 2,-1.0 -7,-0.3 14,-0.3 -0.361 34.8-129.5 -60.7 130.4 3.4 -3.0 -1.3 24 24 A L + 0 0 22 -9,-2.3 12,-0.2 -10,-0.6 -1,-0.1 -0.731 51.0 143.2 -87.6 102.1 0.5 -0.7 -0.3 25 25 A L + 0 0 62 -2,-1.0 28,-2.6 10,-0.4 29,-0.6 0.314 51.7 81.0-118.0 2.9 0.4 2.2 -2.8 26 26 A L E -BC 35 52B 30 9,-1.2 9,-0.7 26,-0.3 2,-0.5 -0.813 62.4-150.3-112.2 152.9 -3.4 2.5 -2.9 27 27 A F E -BC 34 51B 76 24,-1.8 24,-1.6 -2,-0.3 7,-0.3 -0.943 11.9-145.3-127.3 110.9 -5.8 4.3 -0.5 28 28 A C E > - C 0 50B 0 5,-3.0 4,-0.9 -2,-0.5 5,-0.2 -0.511 6.8-164.6 -74.8 138.0 -9.3 3.1 -0.0 29 29 A Q T 4 S+ 0 0 133 20,-1.7 -1,-0.1 -2,-0.2 21,-0.1 0.904 86.0 57.5 -87.1 -49.5 -12.0 5.7 0.6 30 30 A E T 4 S+ 0 0 137 19,-0.3 -1,-0.1 1,-0.2 20,-0.1 0.846 129.2 19.4 -49.9 -36.9 -14.8 3.6 1.9 31 31 A D T 4 S- 0 0 75 2,-0.2 -1,-0.2 14,-0.1 -2,-0.2 0.752 97.1-136.1-103.0 -36.0 -12.4 2.4 4.6 32 32 A G < + 0 0 37 -4,-0.9 2,-0.2 1,-0.3 -3,-0.2 0.767 64.7 110.1 83.0 26.9 -9.8 5.2 4.5 33 33 A K S S- 0 0 107 -5,-0.2 -5,-3.0 0, 0.0 2,-0.6 -0.706 74.2 -94.8-125.2 177.1 -6.9 2.9 4.7 34 34 A V E +B 27 0B 52 -7,-0.3 -7,-0.2 -2,-0.2 2,-0.2 -0.859 44.6 176.7-100.6 118.2 -4.0 1.7 2.4 35 35 A I E -B 26 0B 3 -9,-0.7 -9,-1.2 -2,-0.6 -10,-0.4 -0.711 20.8-125.1-115.4 167.5 -4.7 -1.6 0.6 36 36 A C > - 0 0 0 -2,-0.2 4,-3.1 -12,-0.2 5,-0.2 -0.454 36.8 -90.4-103.9 178.6 -2.7 -3.7 -1.9 37 37 A W H > S+ 0 0 89 -14,-0.3 4,-2.4 1,-0.2 5,-0.2 0.966 126.6 45.2 -52.2 -62.0 -3.6 -5.0 -5.3 38 38 A L H 4 S+ 0 0 74 1,-0.2 -1,-0.2 2,-0.2 -3,-0.0 0.905 114.0 51.3 -49.3 -47.4 -4.9 -8.3 -4.1 39 39 A C H >4 S+ 0 0 11 1,-0.2 3,-2.6 2,-0.2 6,-1.0 0.953 108.0 50.4 -56.0 -54.4 -6.9 -6.5 -1.3 40 40 A E H 3< S+ 0 0 40 -4,-3.1 7,-0.4 1,-0.3 8,-0.3 0.896 114.7 44.3 -51.6 -44.4 -8.5 -4.1 -3.8 41 41 A R T 3< S+ 0 0 183 -4,-2.4 2,-0.3 -5,-0.2 -1,-0.3 0.178 99.3 104.8 -86.9 17.7 -9.5 -7.0 -6.0 42 42 A S S X> S- 0 0 36 -3,-2.6 4,-1.6 -5,-0.2 3,-0.9 -0.773 86.7-116.2-102.4 145.8 -10.6 -8.9 -2.8 43 43 A Q T 34 S+ 0 0 187 -2,-0.3 -1,-0.1 1,-0.3 -4,-0.1 0.696 115.9 64.3 -49.7 -17.9 -14.2 -9.3 -1.7 44 44 A E T 34 S+ 0 0 117 -5,-0.2 -1,-0.3 1,-0.2 -4,-0.1 0.953 122.6 12.5 -72.3 -52.3 -13.1 -7.2 1.2 45 45 A H T X4 S+ 0 0 8 -6,-1.0 3,-1.6 -3,-0.9 -2,-0.2 0.120 92.7 147.1-111.0 18.0 -12.4 -4.0 -0.7 46 46 A R T 3< S+ 0 0 174 -4,-1.6 -5,-0.1 1,-0.3 3,-0.1 -0.331 76.2 6.4 -58.2 129.1 -14.1 -5.2 -3.9 47 47 A G T 3 S+ 0 0 62 -7,-0.4 -1,-0.3 1,-0.3 2,-0.1 0.160 97.5 136.2 83.5 -20.8 -15.6 -2.3 -5.8 48 48 A H < - 0 0 44 -3,-1.6 2,-0.6 -8,-0.3 -1,-0.3 -0.365 57.9-124.0 -62.9 135.3 -14.0 0.1 -3.3 49 49 A H - 0 0 151 -3,-0.1 -20,-1.7 -2,-0.1 -19,-0.3 -0.734 34.2-176.2 -86.6 117.2 -12.5 3.1 -4.9 50 50 A T E -C 28 0B 25 -2,-0.6 -22,-0.3 -22,-0.2 -16,-0.1 -0.782 12.2-147.4-112.9 157.3 -8.8 3.5 -4.0 51 51 A F E -C 27 0B 116 -24,-1.6 -24,-1.8 -2,-0.3 2,-0.6 -0.942 27.4-102.7-126.3 146.9 -6.3 6.2 -4.9 52 52 A P E -C 26 0B 96 0, 0.0 -26,-0.3 0, 0.0 -27,-0.0 -0.533 29.6-173.4 -69.7 112.5 -2.5 6.0 -5.5 53 53 A T - 0 0 27 -28,-2.6 4,-0.2 -2,-0.6 -27,-0.1 0.918 9.1-164.5 -72.2 -45.2 -0.7 7.3 -2.4 54 54 A S - 0 0 90 -29,-0.6 -29,-0.1 2,-0.1 -28,-0.1 0.909 52.8 -80.8 59.3 43.9 2.8 7.3 -3.9 55 55 A G S S+ 0 0 40 1,-0.1 2,-2.1 -41,-0.1 -41,-0.0 -0.308 108.2 7.4 66.3-148.0 4.4 7.5 -0.5 56 56 A P S S+ 0 0 144 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.450 102.5 109.8 -69.8 80.3 4.6 11.0 1.2 57 57 A S - 0 0 72 -2,-2.1 -2,-0.0 -4,-0.2 0, 0.0 -0.965 53.8-156.8-157.9 138.1 2.6 12.9 -1.4 58 58 A S 0 0 136 -2,-0.3 -1,-0.1 -4,-0.0 -3,-0.0 0.959 360.0 360.0 -79.0 -57.3 -0.9 14.6 -1.4 59 59 A G 0 0 93 -5,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.219 360.0 360.0-104.3 360.0 -1.6 14.6 -5.1