==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 02-APR-07 2YRK . COMPND 2 MOLECULE: ZINC FINGER HOMEOBOX PROTEIN 4; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU, . 55 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5535.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 41.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 5.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 10.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 21.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 132 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-161.5 -23.1 41.9 4.9 2 2 A S - 0 0 124 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.982 360.0-163.3-133.9 144.6 -21.8 38.4 4.0 3 3 A S - 0 0 136 -2,-0.4 -1,-0.1 1,-0.1 2,-0.1 0.893 48.4-113.6 -89.7 -49.3 -18.8 36.4 5.3 4 4 A G - 0 0 72 2,-0.0 2,-0.2 0, 0.0 -1,-0.1 -0.236 19.1-122.8 123.8 147.1 -18.5 33.8 2.5 5 5 A S - 0 0 125 -2,-0.1 2,-0.4 2,-0.0 0, 0.0 -0.676 20.7-115.7-116.6 171.6 -18.9 30.1 2.0 6 6 A S + 0 0 108 -2,-0.2 3,-0.1 1,-0.1 -2,-0.0 -0.913 26.4 171.8-112.9 135.2 -16.7 27.2 0.8 7 7 A G + 0 0 88 -2,-0.4 2,-0.1 1,-0.2 -1,-0.1 -0.271 63.1 39.4-135.8 50.3 -17.4 25.2 -2.3 8 8 A G - 0 0 49 2,-0.0 2,-0.3 0, 0.0 -1,-0.2 -0.440 61.0-148.6 164.9 117.7 -14.3 23.0 -2.9 9 9 A T - 0 0 140 -2,-0.1 2,-0.3 -3,-0.1 -3,-0.0 -0.718 14.1-174.2 -99.1 148.7 -11.9 21.1 -0.7 10 10 A D + 0 0 155 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.984 32.4 109.9-145.4 130.3 -8.2 20.5 -1.4 11 11 A G + 0 0 63 -2,-0.3 -1,-0.1 2,-0.0 2,-0.1 0.098 14.3 164.0 163.6 70.3 -5.6 18.4 0.4 12 12 A T + 0 0 147 2,-0.0 3,-0.2 0, 0.0 -2,-0.0 -0.128 26.5 176.7 -92.2 37.5 -4.3 15.2 -1.3 13 13 A K - 0 0 148 1,-0.2 2,-1.3 -2,-0.1 10,-0.1 -0.001 44.6 -94.6 -41.8 144.7 -1.3 15.1 1.1 14 14 A P S S+ 0 0 62 0, 0.0 9,-0.6 0, 0.0 2,-0.3 -0.510 78.0 125.2 -69.8 92.6 0.9 12.0 0.6 15 15 A E - 0 0 93 -2,-1.3 2,-0.4 7,-0.3 7,-0.2 -0.918 60.6-127.2-144.6 169.2 -0.6 9.6 3.2 16 16 A C >>> - 0 0 9 -2,-0.3 4,-2.3 1,-0.1 3,-1.3 -0.636 19.5-179.0-122.2 73.0 -2.0 6.1 3.5 17 17 A T T 345S+ 0 0 130 -2,-0.4 -1,-0.1 1,-0.3 5,-0.1 0.757 86.3 59.3 -41.0 -27.4 -5.4 6.5 5.3 18 18 A L T 345S+ 0 0 72 1,-0.2 -1,-0.3 -3,-0.1 -2,-0.0 0.937 122.0 20.0 -70.0 -48.3 -5.5 2.7 4.9 19 19 A C T <45S- 0 0 23 -3,-1.3 -2,-0.2 2,-0.1 -1,-0.2 0.282 100.1-128.9-103.5 7.6 -2.3 2.1 6.9 20 20 A G T <5 + 0 0 63 -4,-2.3 2,-0.9 1,-0.2 -3,-0.2 0.785 63.3 140.4 49.1 29.0 -2.4 5.5 8.6 21 21 A V < - 0 0 52 -5,-0.8 2,-0.5 17,-0.0 -1,-0.2 -0.745 42.9-154.6-105.9 84.9 1.2 5.9 7.5 22 22 A K - 0 0 133 -2,-0.9 -7,-0.3 -7,-0.2 -9,-0.0 -0.432 21.1-128.7 -61.5 109.0 1.5 9.6 6.4 23 23 A Y - 0 0 6 -9,-0.6 2,-0.2 -2,-0.5 -1,-0.1 -0.246 23.1-112.0 -59.7 146.0 4.4 9.5 3.9 24 24 A S - 0 0 75 1,-0.1 -1,-0.1 4,-0.1 -9,-0.0 -0.510 32.3 -99.7 -81.6 149.3 7.1 12.1 4.5 25 25 A A S S+ 0 0 108 1,-0.2 -1,-0.1 -2,-0.2 -2,-0.1 0.766 129.2 40.5 -35.0 -32.1 7.7 15.0 2.2 26 26 A R S S+ 0 0 183 2,-0.1 -1,-0.2 0, 0.0 -3,-0.1 0.949 101.5 77.1 -84.1 -59.8 10.5 12.8 0.8 27 27 A L S S- 0 0 56 1,-0.1 2,-0.3 4,-0.1 3,-0.0 0.122 70.1-147.0 -44.8 167.5 8.9 9.3 0.8 28 28 A S > - 0 0 47 1,-0.1 4,-2.0 0, 0.0 5,-0.1 -0.963 27.3-106.9-142.3 158.1 6.4 8.5 -1.9 29 29 A I H > S+ 0 0 92 -2,-0.3 4,-2.5 1,-0.2 5,-0.3 0.868 120.8 50.4 -50.3 -40.6 3.2 6.4 -2.4 30 30 A R H > S+ 0 0 163 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.982 105.4 52.2 -62.9 -60.0 5.3 3.9 -4.3 31 31 A D H 4 S+ 0 0 89 2,-0.2 -1,-0.2 1,-0.2 -2,-0.2 0.825 115.6 46.4 -45.9 -35.4 8.1 3.5 -1.8 32 32 A H H >< S+ 0 0 8 -4,-2.0 3,-1.5 1,-0.2 6,-0.6 0.994 111.4 44.4 -71.9 -69.9 5.3 2.8 0.7 33 33 A I H 3< S+ 0 0 56 -4,-2.5 6,-0.2 1,-0.3 -2,-0.2 0.734 108.4 65.1 -47.8 -22.6 3.1 0.3 -1.1 34 34 A F T 3< S+ 0 0 145 -4,-2.4 2,-0.4 -5,-0.3 -1,-0.3 -0.078 92.4 80.4 -93.2 33.8 6.4 -1.3 -2.1 35 35 A S S X> S- 0 0 58 -3,-1.5 3,-2.6 1,-0.1 4,-1.3 -0.988 85.9-121.9-144.4 131.1 7.1 -2.2 1.6 36 36 A K H 3> S+ 0 0 139 -2,-0.4 4,-3.1 1,-0.3 5,-0.3 0.825 109.5 72.2 -34.4 -44.5 5.9 -5.0 3.8 37 37 A Q H 3> S+ 0 0 126 1,-0.2 4,-0.9 2,-0.2 -1,-0.3 0.880 109.3 30.4 -40.2 -50.6 4.5 -2.3 6.1 38 38 A H H X> S+ 0 0 25 -3,-2.6 4,-1.8 -6,-0.6 3,-0.6 0.974 117.2 55.0 -75.3 -59.5 1.8 -1.6 3.5 39 39 A I H >X S+ 0 0 70 -4,-1.3 4,-2.0 -7,-0.3 3,-0.8 0.892 102.9 58.5 -38.7 -56.9 1.4 -5.0 1.9 40 40 A S H >X S+ 0 0 52 -4,-3.1 4,-2.4 1,-0.3 3,-0.8 0.901 106.0 48.0 -40.7 -55.9 0.7 -6.5 5.4 41 41 A K H