==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 02-APR-07 2YRL . COMPND 2 MOLECULE: KIAA1837 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR X.R.QIN,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL . 102 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6927.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 64.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 4.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 27.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 26 25.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 138 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-163.1 25.3 12.7 16.9 2 2 A S - 0 0 123 1,-0.1 2,-0.3 2,-0.0 0, 0.0 -0.482 360.0 -97.1 -91.7 164.3 22.8 14.1 14.4 3 3 A S + 0 0 130 1,-0.2 -1,-0.1 -2,-0.2 3,-0.0 -0.621 52.3 146.5 -83.4 137.3 20.2 12.2 12.4 4 4 A G + 0 0 71 -2,-0.3 -1,-0.2 2,-0.1 -2,-0.0 0.574 33.7 104.4-134.5 -46.4 21.1 11.1 8.9 5 5 A S - 0 0 112 1,-0.1 3,-0.1 3,-0.0 2,-0.1 -0.164 61.3-144.1 -47.1 128.8 19.5 7.8 8.0 6 6 A S - 0 0 61 1,-0.2 2,-0.2 2,-0.0 -1,-0.1 -0.266 39.7 -55.3 -89.7 179.6 16.5 8.4 5.7 7 7 A G - 0 0 53 1,-0.2 3,-0.2 -2,-0.1 -1,-0.2 -0.387 43.9-162.8 -60.4 120.7 13.2 6.6 5.5 8 8 A Q S S+ 0 0 41 1,-0.3 2,-0.4 -2,-0.2 -1,-0.2 0.935 78.5 12.5 -70.0 -47.9 13.9 2.9 5.0 9 9 A A - 0 0 12 77,-0.2 2,-0.6 68,-0.0 -1,-0.3 -0.966 64.9-171.1-137.5 119.5 10.3 2.1 3.9 10 10 A D - 0 0 80 -2,-0.4 20,-0.2 18,-0.2 2,-0.1 -0.905 6.4-173.5-113.9 105.9 7.7 4.6 2.9 11 11 A A - 0 0 4 -2,-0.6 17,-0.1 1,-0.2 62,-0.1 -0.051 52.9-105.1 -85.7 33.7 4.2 3.2 2.3 12 12 A G - 0 0 21 18,-0.2 -1,-0.2 -2,-0.1 3,-0.1 0.252 48.1 -61.0 62.5 165.4 3.0 6.5 1.0 13 13 A P S S- 0 0 97 0, 0.0 -3,-0.0 0, 0.0 2,-0.0 0.050 80.8 -49.1 -69.7-175.7 0.8 9.0 3.0 14 14 A D - 0 0 114 1,-0.1 2,-0.6 75,-0.1 77,-0.2 -0.303 56.4-137.3 -59.4 137.4 -2.7 8.3 4.2 15 15 A K E +a 91 0A 60 75,-2.2 77,-2.8 -3,-0.1 2,-0.5 -0.885 23.1 179.1-104.1 119.9 -5.0 6.9 1.6 16 16 A E E -a 92 0A 106 -2,-0.6 2,-0.3 75,-0.2 77,-0.2 -0.922 4.8-179.8-124.4 106.7 -8.6 8.3 1.4 17 17 A L E -a 93 0A 20 75,-2.6 77,-3.2 -2,-0.5 2,-0.4 -0.757 12.9-155.4-105.3 151.8 -10.9 7.0 -1.3 18 18 A T E > -a 94 0A 54 -2,-0.3 3,-1.3 75,-0.2 77,-0.2 -0.948 36.6 -77.5-131.6 112.9 -14.5 8.0 -2.0 19 19 A L T 3 S+ 0 0 41 75,-1.9 78,-0.2 -2,-0.4 48,-0.0 0.134 113.0 39.9 -38.4 158.6 -16.9 5.6 -3.7 20 20 A P T 3 S+ 0 0 96 0, 0.0 2,-1.3 0, 0.0 -1,-0.4 -0.988 103.8 88.9 -69.7 -3.4 -17.7 4.5 -6.1 21 21 A V < + 0 0 73 -3,-1.3 -2,-0.1 1,-0.2 -4,-0.0 -0.278 49.0 163.8 -53.2 88.4 -13.9 4.6 -6.3 22 22 A D + 0 0 75 -2,-1.3 44,-1.9 -4,-0.1 43,-1.3 -0.253 49.8 70.6-104.7 43.8 -13.4 1.2 -4.7 23 23 A S E +D 64 0B 54 41,-0.2 2,-0.3 42,-0.2 41,-0.2 -0.975 51.9 173.7-159.1 143.2 -9.8 0.8 -5.8 24 24 A T E -D 63 0B 10 39,-1.8 39,-2.1 -2,-0.3 2,-0.4 -0.904 22.5-129.9-144.4 171.4 -6.4 2.4 -4.9 25 25 A T E -D 62 0B 70 -2,-0.3 2,-1.1 37,-0.2 37,-0.2 -0.986 6.9-151.7-133.0 124.9 -2.7 2.0 -5.6 26 26 A L E -D 61 0B 2 35,-2.3 35,-1.5 -2,-0.4 2,-0.9 -0.719 16.9-169.9 -96.3 87.3 0.1 1.9 -3.1 27 27 A D E +D 60 0B 87 -2,-1.1 3,-0.3 33,-0.2 33,-0.2 -0.672 15.1 168.3 -81.0 105.9 3.1 3.3 -4.9 28 28 A G + 0 0 0 31,-2.4 3,-0.5 -2,-0.9 -18,-0.2 -0.021 36.2 120.4-107.1 29.7 6.1 2.6 -2.7 29 29 A S > + 0 0 70 1,-0.3 2,-1.0 2,-0.1 3,-0.5 0.797 68.9 64.6 -61.9 -28.5 8.8 3.6 -5.3 30 30 A K T 3 + 0 0 156 -3,-0.3 -1,-0.3 1,-0.2 -18,-0.2 -0.382 66.3 115.5 -93.0 55.6 10.0 6.2 -2.8 31 31 A S T 3 S+ 0 0 3 -2,-1.0 2,-0.3 -3,-0.5 -1,-0.2 0.827 79.2 16.7 -90.2 -38.1 11.1 3.8 -0.2 32 32 A S < - 0 0 32 -3,-0.5 -1,-0.2 1,-0.1 5,-0.1 -0.871 50.2-168.6-132.7 165.5 14.8 4.5 -0.4 33 33 A D S S+ 0 0 120 -2,-0.3 -1,-0.1 2,-0.1 3,-0.1 0.710 87.4 7.3-117.6 -59.0 17.1 7.3 -1.7 34 34 A D S S+ 0 0 138 1,-0.2 2,-0.8 2,-0.1 -2,-0.1 0.906 121.4 60.0 -92.6 -59.0 20.7 6.2 -1.6 35 35 A Q S S- 0 0 59 1,-0.0 -1,-0.2 44,-0.0 -2,-0.1 -0.637 84.8-139.7 -77.6 107.5 20.5 2.5 -0.6 36 36 A K - 0 0 178 -2,-0.8 44,-0.7 -3,-0.1 2,-0.4 -0.040 12.8-125.6 -59.3 167.9 18.5 0.8 -3.3 37 37 A I B -F 79 0C 18 42,-0.2 42,-0.2 -5,-0.1 -1,-0.1 -0.970 23.6-178.5-124.5 136.9 15.9 -1.9 -2.5 38 38 A I + 0 0 134 40,-1.4 2,-0.3 -2,-0.4 41,-0.1 -0.143 65.8 66.7-122.5 36.4 15.7 -5.5 -3.8 39 39 A S + 0 0 44 39,-0.3 39,-0.4 2,-0.0 2,-0.3 -0.960 49.4 174.9-158.5 137.3 12.6 -6.6 -1.9 40 40 A Y + 0 0 55 -2,-0.3 2,-0.4 37,-0.2 37,-0.2 -0.970 2.5 170.3-149.2 129.6 8.9 -5.7 -1.9 41 41 A L - 0 0 61 -2,-0.3 35,-1.5 35,-0.2 2,-0.5 -0.964 9.2-169.8-144.3 123.5 5.9 -7.2 -0.1 42 42 A W E +B 75 0A 2 14,-0.8 2,-0.3 -2,-0.4 33,-0.2 -0.954 20.4 153.1-117.8 119.7 2.4 -5.9 0.2 43 43 A E E -B 74 0A 117 31,-1.5 31,-2.3 -2,-0.5 2,-0.8 -0.989 44.0-115.5-144.3 151.3 -0.1 -7.5 2.6 44 44 A K E +B 73 0A 44 -2,-0.3 29,-0.3 29,-0.3 3,-0.0 -0.781 28.1 177.1 -91.4 109.5 -3.2 -6.4 4.6 45 45 A T E + 0 0 85 27,-2.3 2,-0.2 -2,-0.8 -1,-0.2 0.945 68.7 11.7 -74.7 -51.1 -2.5 -6.5 8.3 46 46 A Q E S+B 72 0A 135 26,-1.1 26,-0.9 2,-0.0 28,-0.0 -0.626 89.8 67.7-119.9 179.4 -5.9 -5.2 9.5 47 47 A G S S- 0 0 40 24,-0.2 24,-0.2 -2,-0.2 2,-0.1 -0.212 86.5 -38.5 97.7 169.4 -9.2 -4.4 7.9 48 48 A P > - 0 0 62 0, 0.0 2,-0.6 0, 0.0 3,-0.5 -0.404 60.6-115.1 -69.8 141.9 -12.0 -6.6 6.5 49 49 A D T 3 S+ 0 0 160 1,-0.2 -2,-0.1 -2,-0.1 -3,-0.0 -0.679 86.6 70.4 -81.9 119.9 -11.1 -9.7 4.4 50 50 A G T 3 + 0 0 55 -2,-0.6 -1,-0.2 1,-0.3 16,-0.1 -0.017 56.1 112.9 171.3 -51.1 -12.2 -9.3 0.8 51 51 A V < - 0 0 10 -3,-0.5 2,-0.5 1,-0.1 -1,-0.3 0.058 61.4-126.3 -42.8 156.5 -10.2 -6.7 -1.1 52 52 A Q E -E 64 0B 121 12,-2.8 12,-2.5 2,-0.0 2,-0.4 -0.954 16.8-155.6-117.8 120.6 -7.9 -8.1 -3.9 53 53 A L E -E 63 0B 44 -2,-0.5 2,-0.4 10,-0.2 3,-0.2 -0.801 9.0-165.3 -97.1 131.9 -4.2 -7.2 -4.0 54 54 A E E +E 62 0B 71 8,-2.8 8,-1.9 -2,-0.4 4,-0.1 -0.943 69.3 4.7-119.4 138.0 -2.3 -7.3 -7.3 55 55 A N S > S+ 0 0 114 -2,-0.4 3,-1.3 6,-0.2 -1,-0.2 0.849 71.4 162.8 61.9 35.0 1.4 -7.3 -7.8 56 56 A A T 3 + 0 0 29 1,-0.3 -14,-0.8 -3,-0.2 5,-0.1 0.800 69.8 63.4 -54.0 -29.8 1.9 -7.4 -4.0 57 57 A N T 3 S+ 0 0 128 -16,-0.2 2,-0.3 3,-0.1 -1,-0.3 -0.059 96.7 79.7 -87.2 34.1 5.5 -8.5 -4.8 58 58 A S S < S- 0 0 43 -3,-1.3 -30,-0.1 -4,-0.1 -17,-0.0 -0.973 90.1-113.4-140.7 153.8 6.1 -5.2 -6.4 59 59 A S S S+ 0 0 25 -2,-0.3 -31,-2.4 1,-0.2 2,-0.6 0.822 111.6 51.3 -53.5 -32.4 7.0 -1.6 -5.3 60 60 A V E S+D 27 0B 58 -33,-0.2 2,-0.3 -32,-0.1 -33,-0.2 -0.919 75.2 179.5-114.2 109.8 3.6 -0.7 -6.7 61 61 A A E -D 26 0B 0 -35,-1.5 -35,-2.3 -2,-0.6 2,-0.4 -0.735 14.8-146.8-107.6 156.9 0.6 -2.7 -5.5 62 62 A T E -DE 25 54B 45 -8,-1.9 -8,-2.8 -2,-0.3 2,-0.5 -0.985 5.2-163.2-127.6 132.1 -3.1 -2.4 -6.4 63 63 A V E -DE 24 53B 0 -39,-2.1 -39,-1.8 -2,-0.4 2,-0.3 -0.945 12.8-177.9-118.1 115.1 -6.1 -3.1 -4.2 64 64 A T E +DE 23 52B 50 -12,-2.5 -12,-2.8 -2,-0.5 -41,-0.2 -0.712 56.8 44.1-108.4 160.3 -9.5 -3.6 -5.7 65 65 A G S S+ 0 0 40 -43,-1.3 2,-0.3 -2,-0.3 -1,-0.2 0.913 71.8 171.1 75.8 44.4 -12.9 -4.2 -4.1 66 66 A L - 0 0 3 -44,-1.9 2,-0.3 -3,-0.2 -1,-0.2 -0.655 10.1-170.3 -90.0 144.3 -12.6 -1.7 -1.3 67 67 A Q - 0 0 141 -2,-0.3 2,-1.0 -19,-0.1 26,-0.1 -0.825 44.0 -65.0-128.9 167.9 -15.5 -0.8 0.9 68 68 A V S S+ 0 0 89 -2,-0.3 2,-0.3 24,-0.1 26,-0.1 -0.321 98.9 77.5 -55.0 94.9 -16.4 1.8 3.6 69 69 A G S S- 0 0 23 -2,-1.0 24,-1.3 22,-0.1 2,-0.5 -0.939 84.4 -68.9-174.1-165.5 -13.8 0.7 6.2 70 70 A T E - C 0 92A 76 -2,-0.3 2,-0.5 22,-0.2 22,-0.2 -0.948 37.2-174.2-116.9 118.4 -10.2 0.7 7.4 71 71 A Y E - C 0 91A 8 20,-2.1 20,-1.8 -2,-0.5 2,-0.7 -0.943 5.5-164.4-115.5 118.4 -7.6 -1.2 5.5 72 72 A V E -BC 46 90A 9 -26,-0.9 -27,-2.3 -2,-0.5 -26,-1.1 -0.887 6.4-173.0-105.2 113.3 -4.1 -1.5 6.9 73 73 A F E -BC 44 89A 0 16,-1.3 16,-0.9 -2,-0.7 2,-0.4 -0.918 10.3-152.0-109.8 119.4 -1.4 -2.7 4.4 74 74 A T E -BC 43 88A 9 -31,-2.3 -31,-1.5 -2,-0.6 2,-0.7 -0.744 3.3-151.9 -92.1 133.0 2.1 -3.3 5.7 75 75 A L E -BC 42 87A 0 12,-2.1 2,-0.7 -2,-0.4 12,-0.6 -0.884 11.4-172.1-108.4 106.1 5.0 -2.9 3.4 76 76 A T E + C 0 86A 38 -35,-1.5 2,-0.2 -2,-0.7 10,-0.2 -0.860 16.4 162.4-101.6 111.9 8.0 -5.2 4.2 77 77 A V E - C 0 85A 0 8,-0.9 8,-1.7 -2,-0.7 2,-0.3 -0.725 22.1-147.9-121.6 172.1 11.1 -4.4 2.2 78 78 A K E - C 0 84A 93 -39,-0.4 -40,-1.4 -2,-0.2 -39,-0.3 -0.991 5.2-147.8-142.8 149.3 14.8 -5.2 2.5 79 79 A D B > -F 37 0C 2 4,-0.5 3,-1.8 -2,-0.3 4,-0.2 -0.557 45.0 -85.0-109.5 175.7 18.1 -3.5 1.4 80 80 A E T 3 S+ 0 0 141 -44,-0.7 -43,-0.1 1,-0.3 -1,-0.0 0.804 129.7 59.6 -48.9 -31.2 21.5 -4.7 0.3 81 81 A R T 3 S- 0 0 173 1,-0.1 -1,-0.3 2,-0.1 3,-0.2 -0.044 118.4-113.5 -89.7 32.3 22.3 -5.0 4.0 82 82 A N < + 0 0 137 -3,-1.8 2,-0.5 1,-0.2 -2,-0.2 0.805 55.5 175.9 39.2 35.7 19.4 -7.4 4.5 83 83 A L - 0 0 77 -4,-0.2 2,-0.7 1,-0.1 -4,-0.5 -0.599 23.5-143.5 -75.0 118.6 17.8 -4.7 6.6 84 84 A Q E + C 0 78A 147 -2,-0.5 2,-0.3 -3,-0.2 -6,-0.2 -0.746 30.3 166.7 -87.5 115.2 14.3 -5.7 7.7 85 85 A S E - C 0 77A 28 -8,-1.7 -8,-0.9 -2,-0.7 2,-0.3 -0.887 18.5-158.0-127.5 158.4 12.0 -2.7 7.7 86 86 A Q E + C 0 76A 125 -2,-0.3 2,-0.3 -10,-0.2 -77,-0.2 -0.982 11.6 172.6-137.7 148.5 8.2 -2.2 7.9 87 87 A S E - C 0 75A 29 -12,-0.6 -12,-2.1 -2,-0.3 2,-0.2 -0.796 8.5-171.2-159.9 111.2 5.8 0.5 6.9 88 88 A S E - C 0 74A 63 -14,-0.3 2,-0.4 -2,-0.3 -77,-0.2 -0.568 8.3-150.3-100.5 165.9 2.0 0.4 7.0 89 89 A V E - C 0 73A 7 -16,-0.9 -16,-1.3 -2,-0.2 2,-0.6 -0.998 15.8-126.0-141.2 134.6 -0.6 2.9 5.7 90 90 A N E - C 0 72A 92 -2,-0.4 -75,-2.2 -18,-0.2 2,-0.7 -0.688 23.7-165.6 -82.2 116.5 -4.1 3.7 6.8 91 91 A V E -aC 15 71A 0 -20,-1.8 -20,-2.1 -2,-0.6 2,-0.3 -0.869 7.1-172.7-107.5 103.1 -6.6 3.4 3.9 92 92 A I E -aC 16 70A 65 -77,-2.8 -75,-2.6 -2,-0.7 2,-0.5 -0.750 8.7-156.7 -96.8 141.2 -9.9 5.0 4.7 93 93 A V E -a 17 0A 3 -24,-1.3 -75,-0.2 -2,-0.3 2,-0.1 -0.947 10.4-168.4-122.0 113.0 -13.0 4.7 2.4 94 94 A K E -a 18 0A 85 -77,-3.2 -75,-1.9 -2,-0.5 2,-0.2 -0.456 27.8 -98.1 -93.1 168.2 -15.7 7.3 2.5 95 95 A E - 0 0 151 -77,-0.2 2,-0.7 -2,-0.1 -1,-0.1 -0.570 45.8 -91.0 -87.1 150.4 -19.2 7.2 1.0 96 96 A E - 0 0 106 -2,-0.2 -1,-0.1 1,-0.1 -78,-0.0 -0.447 52.3-115.6 -62.9 104.9 -20.0 8.8 -2.4 97 97 A S S S+ 0 0 99 -2,-0.7 -1,-0.1 -78,-0.2 -79,-0.0 0.034 78.3 55.3 -39.4 146.4 -21.1 12.3 -1.4 98 98 A G S S- 0 0 54 -3,-0.1 -2,-0.0 2,-0.0 0, 0.0 0.042 87.2 -77.6 102.1 148.1 -24.8 13.0 -2.2 99 99 A P - 0 0 133 0, 0.0 2,-0.3 0, 0.0 -3,-0.0 -0.021 42.2-157.8 -69.8 178.7 -28.1 11.3 -1.4 100 100 A S - 0 0 116 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.988 7.3-150.2-158.2 158.2 -29.5 8.2 -3.0 101 101 A S 0 0 121 -2,-0.3 0, 0.0 1,-0.1 0, 0.0 -0.986 360.0 360.0-136.5 145.6 -32.7 6.3 -3.7 102 102 A G 0 0 133 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 0.244 360.0 360.0 130.3 360.0 -33.6 2.6 -4.1