==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 03-APR-07 2YS9 . COMPND 2 MOLECULE: HOMEOBOX AND LEUCINE ZIPPER PROTEIN HOMEZ; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OHNISHI,T.TOMIZAWA,S.KOSHIBA,T.HARADA,S.WATANABE,T.KIGAWA, . 70 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6408.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 32.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 136 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 120.8 -5.4 -18.6 -12.0 2 2 A S - 0 0 120 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.983 360.0-158.7-164.8 160.2 -2.8 -21.2 -10.7 3 3 A S + 0 0 129 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.854 41.5 73.1-139.0 173.5 -1.6 -23.0 -7.6 4 4 A G - 0 0 73 -2,-0.3 2,-0.3 1,-0.1 -2,-0.0 0.241 39.4-177.1 94.2 141.4 1.4 -24.8 -6.3 5 5 A S + 0 0 83 4,-0.1 2,-0.3 5,-0.0 4,-0.1 -0.911 5.5 173.9-171.8 143.1 4.9 -23.6 -5.3 6 6 A S - 0 0 98 2,-0.5 0, 0.0 -2,-0.3 0, 0.0 -0.992 59.8 -35.4-153.9 153.8 8.2 -24.9 -4.1 7 7 A G S S+ 0 0 62 -2,-0.3 2,-0.7 1,-0.1 0, 0.0 0.011 124.5 52.1 33.9 -96.3 11.7 -23.7 -3.2 8 8 A P S S- 0 0 121 0, 0.0 -2,-0.5 0, 0.0 -1,-0.1 -0.536 87.9-141.8 -69.7 108.3 12.0 -21.0 -5.9 9 9 A L - 0 0 143 -2,-0.7 -4,-0.1 -4,-0.1 -2,-0.0 -0.433 18.9-112.9 -72.6 143.7 8.9 -18.8 -5.6 10 10 A P - 0 0 91 0, 0.0 -1,-0.1 0, 0.0 -5,-0.0 -0.140 52.9 -58.0 -69.8 169.1 7.2 -17.5 -8.8 11 11 A I - 0 0 154 1,-0.1 0, 0.0 0, 0.0 0, 0.0 0.007 69.6 -90.7 -45.6 152.5 7.1 -13.9 -9.9 12 12 A P - 0 0 109 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.340 45.2-101.5 -69.8 148.5 5.5 -11.4 -7.4 13 13 A P - 0 0 113 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.300 40.2-101.7 -69.7 153.0 1.8 -10.7 -7.7 14 14 A P - 0 0 109 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.147 47.2 -79.5 -69.7 167.6 0.4 -7.4 -9.3 15 15 A P - 0 0 115 0, 0.0 29,-0.0 0, 0.0 0, 0.0 -0.333 50.0-106.1 -69.7 149.5 -0.8 -4.4 -7.4 16 16 A P - 0 0 64 0, 0.0 2,-0.6 0, 0.0 28,-0.2 -0.143 28.9-112.6 -69.8 168.7 -4.3 -4.3 -5.8 17 17 A D + 0 0 77 26,-0.8 4,-0.3 25,-0.2 28,-0.1 -0.923 29.6 175.2-111.4 115.6 -7.2 -2.3 -7.2 18 18 A I >> + 0 0 50 -2,-0.6 4,-2.8 1,-0.2 3,-0.5 0.572 66.5 88.1 -90.9 -11.7 -8.5 0.7 -5.1 19 19 A Q H 3> S+ 0 0 116 1,-0.2 4,-3.0 2,-0.2 5,-0.4 0.906 80.4 61.8 -51.7 -45.7 -10.9 1.7 -7.8 20 20 A P H 3> S+ 0 0 25 0, 0.0 4,-1.7 0, 0.0 -1,-0.2 0.897 113.6 33.7 -47.9 -48.8 -13.5 -0.6 -6.3 21 21 A L H <> S+ 0 0 0 -3,-0.5 4,-2.9 -4,-0.3 -2,-0.2 0.838 113.8 61.0 -78.2 -34.9 -13.5 1.2 -3.0 22 22 A E H X S+ 0 0 101 -4,-2.8 4,-1.8 2,-0.2 5,-0.2 0.933 112.5 36.8 -57.2 -49.0 -12.9 4.6 -4.7 23 23 A R H X S+ 0 0 192 -4,-3.0 4,-2.4 2,-0.2 -2,-0.2 0.950 117.2 50.5 -69.5 -51.0 -16.2 4.4 -6.7 24 24 A Y H X>S+ 0 0 31 -4,-1.7 4,-3.0 -5,-0.4 5,-1.4 0.883 109.3 54.3 -54.6 -41.1 -18.2 2.7 -3.9 25 25 A W H <5S+ 0 0 32 -4,-2.9 4,-0.3 1,-0.2 -1,-0.2 0.979 115.8 34.9 -57.7 -61.4 -17.0 5.4 -1.5 26 26 A A H <5S+ 0 0 79 -4,-1.8 -1,-0.2 -5,-0.2 -2,-0.2 0.735 117.3 59.7 -66.3 -22.2 -18.2 8.4 -3.6 27 27 A A H <5S- 0 0 68 -4,-2.4 -2,-0.2 -5,-0.2 -1,-0.2 0.973 136.8 -11.3 -70.1 -57.2 -21.1 6.3 -4.7 28 28 A H T <5S- 0 0 123 -4,-3.0 -3,-0.2 -5,-0.1 -2,-0.2 0.718 75.7-147.9-112.5 -40.0 -22.7 5.6 -1.3 29 29 A Q < + 0 0 89 -5,-1.4 2,-0.3 -4,-0.3 -4,-0.2 0.850 61.8 110.2 70.8 35.1 -20.0 6.8 1.1 30 30 A Q - 0 0 139 -6,-0.3 2,-0.4 2,-0.0 -1,-0.2 -0.936 57.5-147.4-146.6 119.2 -21.0 4.2 3.7 31 31 A L - 0 0 55 -2,-0.3 2,-0.4 -3,-0.1 20,-0.0 -0.725 18.7-172.4 -88.9 130.4 -19.0 1.1 4.7 32 32 A R >> - 0 0 148 -2,-0.4 4,-1.8 1,-0.1 3,-0.8 -0.954 35.3-125.1-125.1 143.0 -21.0 -2.0 5.7 33 33 A E T 34 S+ 0 0 176 -2,-0.4 5,-0.1 1,-0.3 -1,-0.1 0.765 116.7 52.3 -53.1 -25.4 -19.9 -5.3 7.3 34 34 A T T 3> S+ 0 0 90 1,-0.2 4,-0.8 2,-0.2 -1,-0.3 0.834 112.8 41.2 -80.3 -35.0 -21.6 -6.9 4.3 35 35 A D H <> S+ 0 0 36 -3,-0.8 4,-2.3 2,-0.2 5,-0.3 0.556 101.4 76.5 -88.0 -9.9 -19.8 -4.8 1.7 36 36 A I H X S+ 0 0 15 -4,-1.8 4,-2.5 2,-0.2 -2,-0.2 0.978 103.9 31.4 -63.3 -58.5 -16.5 -5.1 3.6 37 37 A P H > S+ 0 0 58 0, 0.0 4,-1.4 0, 0.0 -1,-0.2 0.827 120.2 54.4 -69.7 -33.1 -15.7 -8.7 2.5 38 38 A Q H X S+ 0 0 123 -4,-0.8 4,-0.7 2,-0.2 -2,-0.2 0.902 114.8 38.9 -68.2 -42.4 -17.4 -8.2 -0.8 39 39 A L H >X S+ 0 0 17 -4,-2.3 4,-2.4 2,-0.2 3,-1.1 0.926 109.8 59.0 -73.6 -47.0 -15.4 -5.1 -1.7 40 40 A S H 3<>S+ 0 0 5 -4,-2.5 5,-2.5 -5,-0.3 4,-0.5 0.867 102.5 55.7 -49.6 -40.3 -12.1 -6.4 -0.2 41 41 A Q H 3<5S+ 0 0 134 -4,-1.4 -1,-0.3 3,-0.2 -2,-0.2 0.845 109.7 46.6 -62.7 -34.4 -12.4 -9.3 -2.7 42 42 A A H <<5S+ 0 0 46 -3,-1.1 -2,-0.2 -4,-0.7 -25,-0.2 0.952 114.3 43.5 -72.6 -52.2 -12.6 -6.9 -5.6 43 43 A S T <5S- 0 0 0 -4,-2.4 -26,-0.8 -27,-0.1 -1,-0.2 0.463 109.5-126.5 -73.1 0.3 -9.7 -4.6 -4.5 44 44 A R T 5 + 0 0 197 -4,-0.5 2,-0.2 -5,-0.3 -3,-0.2 0.915 66.5 128.1 53.5 47.0 -7.8 -7.8 -3.7 45 45 A L < - 0 0 37 -5,-2.5 2,-0.3 -6,-0.1 -1,-0.2 -0.665 63.4 -87.1-123.2 179.2 -7.1 -6.6 -0.2 46 46 A S >> - 0 0 79 -2,-0.2 4,-1.6 1,-0.1 3,-1.6 -0.663 37.2-112.5 -91.6 145.1 -7.5 -7.9 3.4 47 47 A T H 3> S+ 0 0 82 1,-0.3 4,-1.4 -2,-0.3 -1,-0.1 0.805 123.3 51.0 -41.3 -35.0 -10.6 -7.4 5.4 48 48 A Q H 3> S+ 0 0 131 2,-0.2 4,-2.2 1,-0.2 -1,-0.3 0.845 102.3 60.0 -73.9 -35.1 -8.5 -5.1 7.5 49 49 A Q H <> S+ 0 0 100 -3,-1.6 4,-2.4 1,-0.2 -2,-0.2 0.947 107.1 44.5 -57.6 -52.1 -7.3 -3.1 4.5 50 50 A V H X S+ 0 0 0 -4,-1.6 4,-2.3 1,-0.2 5,-0.3 0.899 110.2 56.0 -60.1 -42.4 -10.8 -2.1 3.5 51 51 A L H X S+ 0 0 66 -4,-1.4 4,-1.9 -5,-0.3 -1,-0.2 0.900 112.6 41.5 -57.3 -43.0 -11.7 -1.2 7.1 52 52 A D H X S+ 0 0 96 -4,-2.2 4,-2.4 2,-0.2 -1,-0.2 0.836 109.8 60.5 -74.0 -33.9 -8.7 1.2 7.3 53 53 A W H X S+ 0 0 44 -4,-2.4 4,-1.5 -5,-0.2 -2,-0.2 0.971 114.1 32.6 -57.4 -58.7 -9.3 2.5 3.8 54 54 A F H X S+ 0 0 0 -4,-2.3 4,-2.9 2,-0.2 3,-0.3 0.950 116.5 56.5 -64.5 -50.8 -12.8 3.8 4.5 55 55 A D H < S+ 0 0 116 -4,-1.9 -1,-0.2 -5,-0.3 -2,-0.2 0.878 110.0 46.7 -48.1 -43.2 -12.0 4.7 8.2 56 56 A S H < S+ 0 0 89 -4,-2.4 -1,-0.3 1,-0.2 -2,-0.2 0.849 111.1 52.3 -69.3 -34.9 -9.2 6.9 6.9 57 57 A R H < S+ 0 0 135 -4,-1.5 -2,-0.2 -3,-0.3 -1,-0.2 0.916 90.1 95.2 -67.4 -44.4 -11.4 8.5 4.3 58 58 A L S < S- 0 0 80 -4,-2.9 2,-0.7 1,-0.2 -29,-0.0 0.037 97.9 -82.9 -44.9 155.8 -14.1 9.4 6.8 59 59 A P - 0 0 120 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.537 50.1-150.0 -69.7 108.1 -14.0 12.9 8.2 60 60 A Q - 0 0 150 -2,-0.7 2,-0.8 -4,-0.2 -4,-0.0 -0.450 27.5 -93.9 -79.6 152.4 -11.5 12.9 11.1 61 61 A P S S+ 0 0 131 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.535 79.6 102.7 -69.7 105.9 -11.8 15.2 14.1 62 62 A A S S- 0 0 68 -2,-0.8 2,-0.5 2,-0.0 0, 0.0 -0.977 76.5 -72.1-172.8 168.2 -9.6 18.3 13.3 63 63 A E + 0 0 172 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.626 53.7 172.9 -77.9 121.5 -9.7 21.9 12.1 64 64 A V - 0 0 97 -2,-0.5 -2,-0.0 1,-0.2 0, 0.0 -0.963 38.9-124.6-131.7 148.2 -10.6 22.2 8.4 65 65 A S - 0 0 124 -2,-0.3 -1,-0.2 1,-0.1 -2,-0.0 0.975 65.3 -83.9 -50.6 -71.9 -11.3 25.2 6.2 66 66 A G - 0 0 57 2,-0.0 2,-0.2 0, 0.0 -1,-0.1 0.087 36.7-147.5 154.8 83.8 -14.7 24.1 4.9 67 67 A P - 0 0 109 0, 0.0 2,-0.6 0, 0.0 -3,-0.0 -0.484 24.1-123.2 -69.8 129.3 -15.2 21.7 2.0 68 68 A S + 0 0 128 -2,-0.2 -2,-0.0 1,-0.2 0, 0.0 -0.627 48.3 148.7 -77.5 118.5 -18.4 22.3 -0.0 69 69 A S 0 0 128 -2,-0.6 -1,-0.2 0, 0.0 0, 0.0 0.701 360.0 360.0-116.2 -42.3 -20.6 19.2 -0.1 70 70 A G 0 0 127 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 0.328 360.0 360.0 159.2 360.0 -24.2 20.6 -0.3