==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 03-APR-07 2YSD . COMPND 2 MOLECULE: MEMBRANE-ASSOCIATED GUANYLATE KINASE, WW AND PDZ . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OHNISHI,N.TOCHIO,S.KOSHIBA,T.HARADA,S.WATANABE,T.KIGAWA, . 57 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5163.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 35.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 17.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 129 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 39.8 2.8 12.2 -29.2 2 2 A S - 0 0 121 1,-0.0 3,-0.1 3,-0.0 0, 0.0 -0.028 360.0-102.4 -39.1 133.3 2.6 9.0 -27.2 3 3 A S - 0 0 89 1,-0.1 3,-0.2 3,-0.0 -1,-0.0 0.126 54.6 -66.2 -51.6 175.1 -0.9 7.6 -27.2 4 4 A G S S- 0 0 62 1,-0.2 2,-0.3 -3,-0.1 -1,-0.1 0.056 80.9 -53.0 -58.8 175.5 -3.1 8.1 -24.1 5 5 A S S S+ 0 0 139 -3,-0.1 2,-0.3 2,-0.0 -1,-0.2 -0.347 78.2 148.5 -56.5 114.8 -2.3 6.4 -20.7 6 6 A S + 0 0 96 -2,-0.3 -3,-0.0 -3,-0.2 -1,-0.0 -0.916 23.4 79.8-156.0 124.4 -2.0 2.7 -21.5 7 7 A G + 0 0 68 -2,-0.3 2,-0.3 1,-0.1 -1,-0.1 0.447 48.8 134.1 141.0 64.5 0.2 -0.0 -20.0 8 8 A A - 0 0 86 -3,-0.1 2,-0.1 2,-0.0 -1,-0.1 -0.963 39.6-133.8-135.2 151.8 -1.1 -1.5 -16.7 9 9 A E - 0 0 153 -2,-0.3 3,-0.2 1,-0.1 -2,-0.0 -0.387 16.5-128.5 -96.0 176.5 -1.4 -5.1 -15.4 10 10 A D S S+ 0 0 147 1,-0.2 2,-0.4 -2,-0.1 -1,-0.1 0.575 100.4 46.3 -99.7 -14.5 -4.3 -6.8 -13.6 11 11 A N + 0 0 135 1,-0.1 -1,-0.2 2,-0.0 0, 0.0 -0.776 55.8 151.4-133.1 89.3 -2.2 -8.0 -10.7 12 12 A L - 0 0 89 -2,-0.4 -1,-0.1 -3,-0.2 -2,-0.1 0.871 48.3-134.6 -83.3 -41.2 0.1 -5.4 -9.2 13 13 A G - 0 0 37 3,-0.0 -1,-0.1 2,-0.0 2,-0.1 -0.312 33.3 -40.7 107.7 167.4 0.2 -6.8 -5.7 14 14 A P S S- 0 0 122 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.427 76.5 -84.6 -69.8 138.8 -0.1 -5.4 -2.1 15 15 A L - 0 0 45 -2,-0.1 28,-0.0 2,-0.1 4,-0.0 0.115 53.2-103.9 -37.5 154.0 1.7 -2.1 -1.4 16 16 A P - 0 0 56 0, 0.0 3,-0.3 0, 0.0 -1,-0.0 0.170 26.7-105.0 -69.8-166.6 5.4 -2.4 -0.5 17 17 A E S S+ 0 0 173 1,-0.2 -2,-0.1 3,-0.1 17,-0.0 0.571 114.6 62.2 -99.8 -14.1 6.9 -2.1 3.0 18 18 A N S S+ 0 0 48 16,-0.1 16,-2.0 15,-0.0 17,-1.1 0.094 98.7 71.3 -97.9 21.5 8.4 1.4 2.4 19 19 A W E -A 33 0A 15 -3,-0.3 2,-0.3 14,-0.2 14,-0.2 -0.937 56.4-166.9-135.8 158.0 4.9 2.8 1.9 20 20 A E E -A 32 0A 126 12,-1.7 12,-2.5 -2,-0.3 2,-0.6 -0.870 10.5-152.3-150.9 112.2 1.9 3.6 4.1 21 21 A M E +A 31 0A 78 -2,-0.3 2,-0.3 10,-0.2 10,-0.2 -0.755 32.7 152.9 -88.6 117.8 -1.6 4.5 2.8 22 22 A A E -A 30 0A 33 8,-1.7 8,-3.1 -2,-0.6 2,-0.4 -0.939 38.6-119.2-141.0 162.5 -3.5 6.7 5.2 23 23 A Y E -A 29 0A 141 -2,-0.3 6,-0.3 6,-0.3 -2,-0.0 -0.842 27.5-122.7-107.2 141.6 -6.3 9.3 5.2 24 24 A T - 0 0 46 4,-2.6 -1,-0.1 -2,-0.4 5,-0.0 -0.038 39.7 -88.6 -69.6 178.3 -6.0 12.9 6.4 25 25 A E S S+ 0 0 202 1,-0.2 -1,-0.1 2,-0.1 -2,-0.0 0.929 130.5 47.5 -54.9 -49.5 -8.1 14.5 9.1 26 26 A N S S- 0 0 158 1,-0.1 -1,-0.2 2,-0.1 -3,-0.0 0.882 128.0 -98.1 -60.6 -39.5 -10.7 15.6 6.6 27 27 A G + 0 0 48 1,-0.2 2,-0.6 -5,-0.0 -2,-0.1 0.534 69.0 151.2 128.0 19.5 -10.7 12.1 5.0 28 28 A E - 0 0 104 1,-0.0 -4,-2.6 0, 0.0 2,-0.4 -0.718 41.7-133.5 -85.4 119.7 -8.4 12.4 2.0 29 29 A V E +A 23 0A 53 -2,-0.6 2,-0.3 -6,-0.3 -6,-0.3 -0.573 35.4 167.9 -75.1 126.7 -6.7 9.2 1.2 30 30 A Y E -A 22 0A 56 -8,-3.1 -8,-1.7 -2,-0.4 2,-0.5 -0.871 32.0-122.7-135.0 167.7 -3.0 9.6 0.5 31 31 A F E -AB 21 40A 16 9,-2.6 9,-2.0 -2,-0.3 2,-0.6 -0.960 17.5-147.6-118.8 122.7 0.1 7.4 0.1 32 32 A I E -AB 20 39A 48 -12,-2.5 -12,-1.7 -2,-0.5 2,-0.8 -0.779 8.3-161.3 -91.6 120.8 3.2 7.9 2.3 33 33 A D E >> +AB 19 38A 3 5,-3.3 5,-2.5 -2,-0.6 4,-0.8 -0.851 16.8 170.3-105.5 100.9 6.5 7.2 0.6 34 34 A H T 45S+ 0 0 78 -16,-2.0 -1,-0.2 -2,-0.8 3,-0.2 0.935 71.3 72.1 -72.7 -48.6 9.3 6.6 3.1 35 35 A N T 45S+ 0 0 67 -17,-1.1 -1,-0.2 1,-0.3 -16,-0.1 0.773 126.5 11.2 -37.0 -31.4 11.9 5.3 0.6 36 36 A T T 45S- 0 0 65 -3,-0.4 -1,-0.3 -18,-0.2 -2,-0.2 0.378 103.4-122.2-128.1 -4.6 11.9 9.0 -0.4 37 37 A K T <5 + 0 0 177 -4,-0.8 2,-0.3 1,-0.2 -3,-0.3 0.921 66.1 135.7 60.2 46.1 9.9 10.5 2.5 38 38 A T E < -B 33 0A 59 -5,-2.5 -5,-3.3 2,-0.0 2,-0.4 -0.880 47.8-137.1-124.8 156.8 7.4 12.0 0.1 39 39 A T E +B 32 0A 95 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.940 21.7 179.0-117.5 135.3 3.6 12.2 0.0 40 40 A S E -B 31 0A 33 -9,-2.0 -9,-2.6 -2,-0.4 17,-0.0 -0.911 30.9-142.7-131.9 158.9 1.4 11.7 -3.0 41 41 A W S S+ 0 0 156 -2,-0.3 2,-0.1 -11,-0.2 -1,-0.1 0.775 86.7 55.1 -89.0 -30.9 -2.4 11.7 -3.7 42 42 A L S S- 0 0 126 -11,-0.1 -11,-0.2 1,-0.1 -2,-0.1 -0.402 94.0 -94.0 -96.4 175.8 -2.3 8.8 -6.2 43 43 A D > - 0 0 26 1,-0.1 4,-0.7 -2,-0.1 3,-0.3 -0.698 18.1-144.6 -94.2 143.6 -0.9 5.2 -5.8 44 44 A P T >4 S+ 0 0 16 0, 0.0 3,-1.5 0, 0.0 -1,-0.1 0.928 95.0 68.4 -69.7 -47.7 2.6 4.2 -6.8 45 45 A R T 34 S+ 0 0 95 1,-0.3 -2,-0.0 -32,-0.1 0, 0.0 0.814 101.6 51.2 -41.5 -35.8 1.8 0.7 -8.0 46 46 A C T 34 S+ 0 0 94 -3,-0.3 -1,-0.3 -38,-0.1 2,-0.1 0.851 101.8 74.2 -72.5 -35.6 -0.1 2.5 -10.8 47 47 A L << - 0 0 76 -3,-1.5 3,-0.1 -4,-0.7 0, 0.0 -0.410 63.0-160.2 -78.2 155.6 2.9 4.7 -11.7 48 48 A N S S+ 0 0 149 1,-0.2 2,-0.8 -2,-0.1 -1,-0.1 0.812 80.5 47.0-101.5 -45.2 5.9 3.3 -13.5 49 49 A K S S- 0 0 173 3,-0.0 3,-0.3 1,-0.0 -1,-0.2 -0.866 85.2-138.0-105.6 104.3 8.7 5.8 -12.7 50 50 A Q - 0 0 105 -2,-0.8 2,-1.8 1,-0.2 -2,-0.1 0.101 49.5 -64.0 -49.2 170.3 8.7 6.6 -9.0 51 51 A Q + 0 0 54 4,-0.0 2,-0.5 -13,-0.0 -1,-0.2 -0.409 69.5 179.2 -63.6 86.3 9.2 10.2 -7.9 52 52 A S - 0 0 95 -2,-1.8 -3,-0.0 -3,-0.3 -1,-0.0 -0.811 47.7 -32.8 -97.1 128.3 12.7 10.7 -9.3 53 53 A G S S- 0 0 57 -2,-0.5 2,-0.3 2,-0.1 0, 0.0 -0.141 116.4 -4.9 62.3-160.3 14.4 14.1 -8.9 54 54 A P - 0 0 137 0, 0.0 2,-0.4 0, 0.0 -2,-0.1 -0.498 67.7-175.1 -69.8 126.0 12.4 17.3 -8.9 55 55 A S - 0 0 66 -2,-0.3 -2,-0.1 1,-0.2 -4,-0.0 -0.975 19.9-160.6-129.3 119.9 8.7 16.8 -9.6 56 56 A S 0 0 139 -2,-0.4 -1,-0.2 1,-0.2 0, 0.0 0.975 360.0 360.0 -59.1 -58.9 6.2 19.6 -10.1 57 57 A G 0 0 103 -17,-0.0 -1,-0.2 0, 0.0 0, 0.0 -0.600 360.0 360.0 -83.8 360.0 3.1 17.5 -9.4