==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GROWTH FACTOR 01-APR-96 1YUF . COMPND 2 MOLECULE: TRANSFORMING GROWTH FACTOR ALPHA; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR F.J.MOY,G.T.MONTELIONE,H.A.SCHERAGA . 50 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4000.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 38.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 12.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 12.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 159 0, 0.0 2,-4.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 166.4 4.8 13.6 10.0 2 2 A V + 0 0 132 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.231 360.0 109.6 67.2 -56.4 2.2 16.3 9.4 3 3 A S - 0 0 25 -2,-4.3 2,-0.2 1,-0.1 -1,-0.1 0.034 52.3-167.7 -44.6 157.4 2.5 15.5 5.8 4 4 A H - 0 0 99 -3,-0.1 23,-0.5 19,-0.0 21,-0.4 -0.704 9.8-127.4-137.6-172.1 -0.5 13.8 4.2 5 5 A F + 0 0 96 19,-0.2 19,-0.2 -2,-0.2 3,-0.1 -0.783 22.4 165.4-135.6 178.2 -1.6 12.0 1.0 6 6 A N + 0 0 123 17,-1.1 2,-1.0 -2,-0.2 17,-0.1 0.045 66.4 52.4-153.9 -87.6 -4.3 12.1 -1.6 7 7 A D + 0 0 94 1,-0.2 -1,-0.2 15,-0.1 15,-0.1 -0.568 54.9 175.0 -71.3 101.8 -3.9 10.2 -4.9 8 8 A a + 0 0 33 -2,-1.0 2,-0.3 13,-0.1 14,-0.2 0.936 63.2 70.2 -72.3 -48.9 -3.0 6.7 -3.7 9 9 A P + 0 0 81 0, 0.0 14,-0.0 0, 0.0 12,-0.0 -0.565 48.6 132.3 -75.0 129.1 -3.1 5.3 -7.3 10 10 A D S S- 0 0 54 -2,-0.3 2,-0.5 0, 0.0 -3,-0.0 0.020 88.0 -79.3-167.2 35.8 -0.2 6.4 -9.4 11 11 A S S > S+ 0 0 103 1,-0.1 3,-1.5 0, 0.0 0, 0.0 -0.196 126.7 81.7 88.1 -42.0 1.2 3.3 -11.0 12 12 A H G > + 0 0 84 -2,-0.5 3,-2.0 1,-0.3 20,-0.2 0.558 65.2 91.4 -70.1 -7.4 3.1 2.5 -7.8 13 13 A T G > + 0 0 52 1,-0.3 3,-0.7 2,-0.1 -1,-0.3 0.610 66.3 79.0 -62.8 -10.9 -0.3 1.1 -6.7 14 14 A Q G < + 0 0 137 -3,-1.5 -1,-0.3 1,-0.3 -2,-0.1 0.419 68.5 87.1 -77.2 2.0 1.1 -2.1 -8.2 15 15 A F G < S+ 0 0 101 -3,-2.0 2,-0.3 1,-0.0 17,-0.3 0.139 86.1 59.2 -87.0 19.4 3.0 -2.4 -5.0 16 16 A b < - 0 0 18 -3,-0.7 27,-0.1 1,-0.1 3,-0.1 -0.970 58.4-165.5-150.9 131.6 0.1 -4.2 -3.4 17 17 A F S S- 0 0 116 25,-0.8 27,-0.1 -2,-0.3 26,-0.1 0.866 88.7 -19.6 -82.7 -41.0 -1.8 -7.3 -4.3 18 18 A H S S+ 0 0 79 24,-0.4 2,-0.2 25,-0.1 -1,-0.1 -0.363 107.5 85.4-170.8 78.6 -4.8 -6.7 -2.2 19 19 A G S S- 0 0 23 16,-0.1 16,-0.3 15,-0.1 15,-0.3 -0.838 77.1 -43.9-158.0-167.2 -4.4 -4.3 0.7 20 20 A T - 0 0 47 14,-3.9 2,-0.4 13,-0.4 -2,-0.1 -0.383 48.2-150.6 -73.5 152.1 -4.6 -0.6 1.7 21 21 A a + 0 0 36 11,-0.3 2,-0.3 -2,-0.1 11,-0.2 -0.975 19.5 167.5-127.8 140.5 -3.0 2.0 -0.5 22 22 A R E -A 31 0A 117 9,-1.0 9,-1.5 -2,-0.4 2,-0.6 -0.873 11.4-170.2-156.8 118.1 -1.5 5.3 0.6 23 23 A F E -A 30 0A 12 -2,-0.3 -17,-1.1 7,-0.2 2,-1.1 -0.947 20.4-139.2-115.8 115.9 0.7 7.7 -1.4 24 24 A L E > -A 29 0A 43 5,-1.8 5,-0.7 -2,-0.6 -19,-0.2 -0.610 21.3-174.1 -74.7 101.1 2.4 10.6 0.4 25 25 A V T > 5S+ 0 0 39 -2,-1.1 3,-2.4 -21,-0.4 -1,-0.2 0.983 82.9 40.9 -57.2 -83.5 2.0 13.4 -2.1 26 26 A Q T 3 5S+ 0 0 135 1,-0.3 -1,-0.2 -22,-0.3 -21,-0.1 0.777 128.3 39.6 -34.8 -35.0 3.9 16.2 -0.4 27 27 A E T 3 5S- 0 0 100 -23,-0.5 -1,-0.3 2,-0.1 -3,-0.3 -0.404 98.4-142.5-115.7 52.8 6.3 13.4 0.3 28 28 A D T < 5 + 0 0 120 -3,-2.4 -3,-0.2 -5,-0.1 -2,-0.1 0.229 47.9 143.4 -18.3 96.0 6.1 11.5 -2.9 29 29 A K E < -A 24 0A 129 -5,-0.7 -5,-1.8 2,-0.1 2,-0.5 -0.736 40.2-151.4-154.2 97.7 6.3 8.1 -1.4 30 30 A P E +A 23 0A 48 0, 0.0 2,-0.3 0, 0.0 -7,-0.2 -0.599 32.9 150.1 -75.0 119.9 4.2 5.2 -2.8 31 31 A A E -A 22 0A 61 -9,-1.5 -9,-1.0 -2,-0.5 2,-0.5 -0.880 25.0-166.1-155.7 117.9 3.4 2.7 -0.1 32 32 A b - 0 0 25 -2,-0.3 -11,-0.3 -17,-0.3 2,-0.1 -0.922 16.7-140.9-109.6 128.4 0.4 0.4 0.1 33 33 A V - 0 0 74 -2,-0.5 -13,-0.4 1,-0.2 -15,-0.1 -0.369 24.4-102.9 -81.9 164.5 -0.4 -1.3 3.4 34 34 A c - 0 0 47 -15,-0.3 -14,-3.9 1,-0.1 -1,-0.2 0.331 25.2-137.1 -65.3-155.4 -1.7 -4.8 3.7 35 35 A H - 0 0 104 -16,-0.3 2,-0.2 -17,-0.1 -16,-0.1 0.476 40.2 -86.0-131.3 -76.3 -5.4 -5.6 4.4 36 36 A S S S+ 0 0 99 7,-0.1 3,-0.1 3,-0.1 11,-0.0 -0.663 96.4 28.1 159.3 145.7 -6.1 -8.4 6.9 37 37 A G S S+ 0 0 55 1,-0.2 2,-0.1 -2,-0.2 10,-0.1 0.666 99.4 111.5 60.5 16.2 -6.5 -12.1 7.1 38 38 A Y - 0 0 58 8,-0.2 8,-0.3 9,-0.1 2,-0.3 -0.291 50.7-156.8-105.7-168.6 -4.1 -12.2 4.1 39 39 A V B +B 45 0B 23 6,-3.2 6,-1.1 8,-0.1 3,-0.1 -0.950 33.4 92.1-161.0 173.6 -0.6 -13.4 3.5 40 40 A G S S- 0 0 41 3,-0.3 3,-0.1 -2,-0.3 -2,-0.0 -0.273 81.2 -75.4 113.3 160.4 2.4 -12.9 1.2 41 41 A A S S+ 0 0 111 1,-0.3 -1,-0.1 -2,-0.1 0, 0.0 0.876 138.3 12.0 -56.6 -39.5 5.5 -10.8 1.1 42 42 A R S S- 0 0 112 -3,-0.1 -25,-0.8 -9,-0.0 -24,-0.4 0.115 130.2 -79.5-123.7 16.5 3.3 -7.9 0.1 43 43 A c S S+ 0 0 12 -27,-0.1 -3,-0.3 -26,-0.1 -25,-0.1 0.805 86.4 140.9 87.1 35.0 0.0 -9.5 0.8 44 44 A E + 0 0 69 -27,-0.1 -4,-0.3 -6,-0.1 2,-0.2 0.865 59.0 59.7 -74.8 -38.6 0.1 -11.5 -2.4 45 45 A H B S-B 39 0B 115 -6,-1.1 -6,-3.2 4,-0.1 2,-0.5 -0.481 77.3-138.4 -88.9 161.8 -1.4 -14.6 -0.8 46 46 A A - 0 0 39 1,-0.4 -8,-0.2 -8,-0.3 -9,-0.1 -0.925 57.4 -53.2-126.8 105.2 -4.7 -14.8 1.0 47 47 A D S S+ 0 0 95 -2,-0.5 -1,-0.4 1,-0.1 -8,-0.1 0.205 98.1 94.6 52.1 175.6 -4.8 -16.7 4.2 48 48 A L S S+ 0 0 169 -3,-0.1 -1,-0.1 -10,-0.1 -9,-0.1 0.668 80.4 75.5 79.1 18.4 -3.6 -20.3 4.4 49 49 A L 0 0 102 -11,-0.1 -9,-0.2 -4,-0.1 -2,-0.1 -0.201 360.0 360.0-154.2 48.5 -0.2 -18.9 5.5 50 50 A A 0 0 154 -11,-0.1 -3,-0.1 -13,-0.0 -12,-0.0 0.971 360.0 360.0 -55.4 360.0 -0.7 -17.9 9.2