==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 18-FEB-05 1YWS . COMPND 2 MOLECULE: PROTEIN YBL071W-A; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR J.A.LUKIN,V.GUIDO,C.H.ARROWSMITH,NORTHEAST STRUCTURAL . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5837.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 56.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 19.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 17.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 222 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 81.1 -12.7 7.8 -11.8 2 2 A S - 0 0 78 51,-0.1 2,-1.1 53,-0.0 3,-0.2 -0.903 360.0 -66.9-152.3 179.2 -10.9 10.3 -13.9 3 3 A T + 0 0 54 -2,-0.3 51,-0.2 1,-0.2 3,-0.0 -0.651 56.2 151.6 -82.1 100.8 -7.5 10.8 -15.5 4 4 A Y + 0 0 206 -2,-1.1 2,-0.4 49,-0.4 -1,-0.2 0.595 60.0 67.8-103.1 -16.8 -5.0 11.3 -12.7 5 5 A D - 0 0 101 48,-0.4 50,-3.4 -3,-0.2 2,-0.4 -0.881 65.4-172.9-102.1 138.4 -2.0 9.9 -14.6 6 6 A E E -a 55 0A 123 -2,-0.4 2,-0.4 48,-0.2 50,-0.2 -0.960 1.1-170.9-137.7 114.9 -0.8 12.0 -17.5 7 7 A I E -a 56 0A 16 48,-2.7 50,-2.3 -2,-0.4 2,-0.1 -0.868 27.6-114.3-111.4 138.8 1.9 10.8 -19.9 8 8 A E E >> -a 57 0A 118 -2,-0.4 3,-1.9 48,-0.2 4,-1.5 -0.448 28.5-119.9 -66.7 141.6 3.7 12.8 -22.5 9 9 A I T 34 S+ 0 0 9 48,-2.7 -1,-0.1 1,-0.3 49,-0.1 0.769 111.2 62.9 -57.1 -28.3 2.9 11.5 -26.1 10 10 A E T 34 S+ 0 0 155 47,-0.2 -1,-0.3 1,-0.2 4,-0.1 0.792 103.5 47.4 -68.1 -28.8 6.6 10.8 -26.6 11 11 A D T <4 S+ 0 0 85 -3,-1.9 -2,-0.2 2,-0.1 -1,-0.2 0.865 93.0 89.6 -82.2 -38.8 6.7 8.2 -23.9 12 12 A M S < S- 0 0 1 -4,-1.5 2,-0.5 1,-0.1 11,-0.2 -0.397 87.7-121.3 -53.3 127.1 3.5 6.5 -25.1 13 13 A T E -B 22 0A 69 9,-1.8 9,-3.7 -2,-0.1 2,-0.4 -0.654 26.8-142.8 -79.1 123.2 4.6 3.9 -27.6 14 14 A F E -B 21 0A 85 -2,-0.5 7,-0.3 7,-0.3 3,-0.1 -0.721 10.0-157.7 -94.7 134.5 3.0 4.5 -31.0 15 15 A E E >>> -B 20 0A 37 5,-3.3 5,-1.7 -2,-0.4 3,-1.1 -0.865 7.4-173.7-107.2 94.3 1.8 1.8 -33.3 16 16 A P T 345S+ 0 0 38 0, 0.0 -1,-0.1 0, 0.0 5,-0.1 0.772 84.2 57.4 -59.9 -28.0 1.7 3.3 -36.8 17 17 A E T 345S+ 0 0 140 1,-0.2 -2,-0.0 -3,-0.1 53,-0.0 0.794 113.2 39.2 -73.7 -27.5 0.1 0.2 -38.2 18 18 A N T <45S- 0 0 80 -3,-1.1 -1,-0.2 2,-0.2 3,-0.1 0.532 105.5-129.1 -96.9 -10.1 -2.8 0.6 -35.8 19 19 A Q T <5S+ 0 0 78 -4,-1.1 16,-1.3 1,-0.2 17,-0.4 0.839 75.2 91.2 62.7 36.7 -2.9 4.4 -36.1 20 20 A M E > -C 20 0A 116 -2,-0.4 4,-1.8 10,-0.3 3,-0.7 -0.709 7.0-144.6 -94.0 131.1 -6.7 6.5 -30.8 35 35 A L H 3> S+ 0 0 2 -16,-1.3 4,-2.6 -2,-0.4 5,-0.2 0.817 99.6 66.6 -59.3 -31.6 -5.2 9.3 -32.8 36 36 A D H 3> S+ 0 0 119 -17,-0.4 4,-0.7 1,-0.2 -1,-0.2 0.918 108.2 35.9 -54.3 -47.2 -8.7 9.8 -34.3 37 37 A D H <4>S+ 0 0 74 -3,-0.7 5,-1.9 2,-0.2 4,-0.3 0.753 111.7 61.0 -83.4 -24.5 -10.1 10.9 -30.9 38 38 A M H ><5S+ 0 0 0 -4,-1.8 3,-1.2 1,-0.2 -2,-0.2 0.887 103.5 51.1 -65.1 -38.8 -6.8 12.7 -30.1 39 39 A F H 3<5S+ 0 0 91 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.807 101.2 63.0 -65.6 -29.4 -7.4 14.9 -33.2 40 40 A E T 3<5S- 0 0 132 -4,-0.7 -1,-0.3 -5,-0.2 -2,-0.2 0.613 126.2-102.8 -71.1 -12.3 -10.9 15.5 -31.8 41 41 A G T < 5S+ 0 0 45 -3,-1.2 2,-0.4 1,-0.4 -3,-0.2 0.315 87.1 117.8 107.4 -6.9 -9.2 17.2 -28.8 42 42 A E < - 0 0 104 -5,-1.9 -1,-0.4 2,-0.0 2,-0.4 -0.760 40.1-173.2 -94.9 138.4 -9.6 14.3 -26.3 43 43 A K + 0 0 55 -2,-0.4 13,-1.0 -3,-0.1 2,-0.3 -0.836 31.0 114.0-138.7 101.5 -6.5 12.7 -24.9 44 44 A V E - E 0 55A 42 -2,-0.4 2,-0.5 11,-0.3 -10,-0.3 -0.895 45.8-142.1-165.2 130.9 -6.8 9.6 -22.7 45 45 A A E - E 0 54A 0 9,-3.0 9,-2.2 -2,-0.3 2,-0.4 -0.852 16.4-159.7-100.5 131.1 -5.7 6.0 -23.2 46 46 A V E -DE 32 53A 62 -14,-2.4 -14,-2.6 -2,-0.5 7,-0.2 -0.893 4.9-148.0-110.8 139.4 -7.9 3.3 -21.9 47 47 A C E >> - E 0 52A 0 5,-2.9 4,-0.7 -2,-0.4 5,-0.6 -0.903 11.9-137.5-108.3 134.4 -6.7 -0.2 -21.1 48 48 A P T 45S+ 0 0 41 0, 0.0 2,-1.7 0, 0.0 -19,-0.4 -0.493 80.9 23.1 -83.0 157.2 -9.0 -3.3 -21.6 49 49 A S T 45S+ 0 0 97 1,-0.2 -19,-0.0 -2,-0.2 -2,-0.0 -0.382 132.9 39.0 84.7 -55.8 -9.2 -6.2 -19.1 50 50 A C T 45S- 0 0 54 -2,-1.7 -1,-0.2 2,-0.1 -23,-0.0 0.813 100.8-144.7 -87.7 -33.1 -7.9 -4.1 -16.2 51 51 A S T <5 + 0 0 90 -4,-0.7 2,-0.3 1,-0.2 -2,-0.1 0.985 36.5 157.6 67.4 64.1 -9.9 -1.1 -17.4 52 52 A L E < - E 0 47A 93 -5,-0.6 -5,-2.9 -4,-0.1 2,-0.4 -0.845 26.0-153.7-114.5 154.6 -7.7 1.8 -16.5 53 53 A M E + E 0 46A 83 -2,-0.3 -49,-0.4 -7,-0.2 -48,-0.4 -0.994 14.0 174.8-132.5 137.1 -7.7 5.3 -18.0 54 54 A I E - E 0 45A 11 -9,-2.2 -9,-3.0 -2,-0.4 -48,-0.2 -0.986 28.6-115.7-143.7 148.2 -4.8 7.8 -18.2 55 55 A D E -aE 6 44A 14 -50,-3.4 -48,-2.7 -2,-0.3 2,-0.4 -0.494 23.6-151.9 -85.2 152.9 -4.3 11.2 -19.8 56 56 A V E -a 7 0A 0 -13,-1.0 2,-0.7 -50,-0.2 -48,-0.2 -0.956 12.3-134.9-134.1 117.8 -1.8 11.8 -22.6 57 57 A V E +a 8 0A 60 -50,-2.3 -48,-2.7 -2,-0.4 2,-0.2 -0.550 36.7 177.4 -71.4 108.1 -0.1 15.0 -23.4 58 58 A F - 0 0 59 -2,-0.7 2,-0.3 -50,-0.2 3,-0.1 -0.668 14.6-151.8-109.8 164.9 -0.3 15.5 -27.2 59 59 A D > - 0 0 53 -2,-0.2 4,-2.2 1,-0.1 5,-0.1 -0.949 25.5-124.3-134.1 160.3 0.8 18.2 -29.5 60 60 A K H > S+ 0 0 108 -2,-0.3 4,-2.0 1,-0.2 5,-0.2 0.906 115.3 48.2 -62.5 -44.6 -0.3 19.6 -32.8 61 61 A E H > S+ 0 0 118 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.844 111.1 50.6 -69.4 -35.6 3.2 19.1 -34.3 62 62 A D H > S+ 0 0 66 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.914 108.7 51.6 -67.9 -44.0 3.4 15.5 -32.9 63 63 A L H X S+ 0 0 14 -4,-2.2 4,-2.7 1,-0.2 -2,-0.2 0.934 110.8 47.1 -59.3 -49.2 -0.0 14.6 -34.4 64 64 A A H X S+ 0 0 41 -4,-2.0 4,-1.4 2,-0.2 -1,-0.2 0.897 113.9 48.1 -60.6 -41.6 0.9 15.8 -37.9 65 65 A E H X S+ 0 0 126 -4,-1.7 4,-1.4 1,-0.2 3,-0.2 0.926 115.1 43.8 -66.7 -45.9 4.2 14.0 -37.8 66 66 A Y H X S+ 0 0 5 -4,-2.7 4,-3.7 1,-0.2 5,-0.3 0.845 104.9 64.6 -67.6 -35.7 2.7 10.8 -36.6 67 67 A Y H X>S+ 0 0 30 -4,-2.7 5,-2.3 -5,-0.2 4,-0.7 0.888 104.9 45.9 -53.8 -41.3 -0.1 11.1 -39.1 68 68 A E H <5S+ 0 0 122 -4,-1.4 -1,-0.2 -3,-0.2 -2,-0.2 0.877 115.3 46.3 -70.1 -38.8 2.4 10.8 -41.9 69 69 A E H <5S+ 0 0 116 -4,-1.4 -2,-0.2 1,-0.2 -1,-0.2 0.929 111.1 50.1 -70.1 -45.9 4.1 7.8 -40.2 70 70 A A H <5S- 0 0 9 -4,-3.7 -1,-0.2 -5,-0.1 -2,-0.2 0.661 111.8-124.1 -67.9 -15.5 0.9 6.0 -39.5 71 71 A G T <5 + 0 0 62 -4,-0.7 2,-0.2 -5,-0.3 -3,-0.2 0.967 52.9 158.1 71.6 53.0 -0.0 6.5 -43.1 72 72 A I < - 0 0 44 -5,-2.3 -1,-0.2 -6,-0.1 -53,-0.0 -0.688 51.5 -78.2-106.4 163.0 -3.3 8.2 -42.5 73 73 A H - 0 0 166 -2,-0.2 -1,-0.1 1,-0.2 -5,-0.0 -0.393 67.9 -83.5 -62.4 131.0 -5.3 10.5 -44.8 74 74 A P - 0 0 114 0, 0.0 -1,-0.2 0, 0.0 2,-0.1 -0.025 49.1-143.9 -42.2 120.4 -3.8 14.1 -44.9 75 75 A P - 0 0 38 0, 0.0 3,-0.1 0, 0.0 -3,-0.0 -0.351 30.4 -83.2 -81.7 165.5 -5.1 16.1 -41.9 76 76 A E - 0 0 157 1,-0.1 -12,-0.0 -2,-0.1 0, 0.0 -0.552 56.4-103.2 -72.8 133.0 -5.9 19.8 -42.0 77 77 A P - 0 0 126 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 -0.167 32.2-124.2 -59.6 146.9 -2.7 22.0 -41.5 78 78 A I - 0 0 60 2,-0.2 2,-2.1 -18,-0.1 0, 0.0 -0.372 34.5 -91.7 -85.1 169.5 -2.0 23.6 -38.1 79 79 A A S S+ 0 0 116 -2,-0.1 2,-0.2 1,-0.1 -1,-0.1 -0.264 101.1 90.7 -79.8 52.9 -1.4 27.3 -37.6 80 80 A A + 0 0 60 -2,-2.1 2,-0.3 -19,-0.0 -2,-0.2 -0.724 42.3 138.1-150.6 94.1 2.3 26.9 -38.0 81 81 A A 0 0 102 -2,-0.2 -2,-0.0 -4,-0.1 0, 0.0 -0.878 360.0 360.0-145.8 105.9 3.8 27.3 -41.4 82 82 A A 0 0 180 -2,-0.3 -1,-0.0 0, 0.0 0, 0.0 -0.437 360.0 360.0-144.5 360.0 7.0 29.1 -42.2