==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 20-APR-07 2YW8 . COMPND 2 MOLECULE: RUN AND FYVE DOMAIN-CONTAINING PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.WANG,S.KISHISHITA,K.MURAYAMA,C.TAKEMOTO,T.TERADA, . 61 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4763.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 27 44.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 18.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 15 A K 0 0 248 0, 0.0 2,-0.3 0, 0.0 28,-0.1 0.000 360.0 360.0 360.0 104.8 -22.5 -9.7 -19.7 2 16 A D + 0 0 64 26,-0.1 2,-0.2 27,-0.1 3,-0.1 -0.996 360.0 177.7-157.2 144.4 -25.8 -7.7 -20.2 3 17 A D + 0 0 126 -2,-0.3 27,-0.1 1,-0.1 0, 0.0 -0.721 51.0 51.5-132.6-174.4 -28.1 -6.1 -23.0 4 18 A E + 0 0 194 -2,-0.2 2,-0.2 1,-0.1 -1,-0.1 0.785 60.4 162.2 55.0 45.1 -31.4 -4.1 -23.5 5 19 A A - 0 0 24 1,-0.1 -1,-0.1 -3,-0.1 3,-0.1 -0.532 23.1-173.2 -92.3 161.7 -31.0 -1.1 -21.1 6 20 A T + 0 0 82 1,-0.4 9,-2.5 -2,-0.2 2,-0.3 0.646 69.7 26.1-120.5 -37.0 -33.1 2.1 -21.2 7 21 A H B S-A 14 0A 89 7,-0.3 -1,-0.4 23,-0.1 2,-0.3 -0.876 95.7 -87.1-127.1 159.8 -31.7 4.4 -18.7 8 22 A C > - 0 0 1 5,-2.3 4,-1.5 -2,-0.3 23,-0.2 -0.545 34.0-133.9 -68.4 129.1 -28.2 4.7 -17.2 9 23 A R T 4 S+ 0 0 160 21,-2.2 -1,-0.2 -2,-0.3 22,-0.1 0.819 99.9 37.2 -53.2 -31.9 -28.0 2.3 -14.3 10 24 A Q T 4 S+ 0 0 66 20,-0.2 -1,-0.1 1,-0.1 21,-0.1 0.966 131.5 16.6 -86.7 -73.0 -26.3 5.1 -12.3 11 25 A C T 4 S- 0 0 48 1,-0.1 -2,-0.1 2,-0.1 -1,-0.1 0.572 90.8-137.2 -80.7 -11.0 -27.7 8.6 -13.1 12 26 A E < + 0 0 143 -4,-1.5 -3,-0.1 1,-0.2 -1,-0.1 0.553 47.6 150.4 67.7 9.7 -30.8 7.1 -14.6 13 27 A K - 0 0 118 -6,-0.1 -5,-2.3 1,-0.1 2,-0.4 -0.327 54.1 -94.7 -69.1 158.8 -30.9 9.5 -17.6 14 28 A E B -A 7 0A 125 -7,-0.2 -7,-0.3 1,-0.0 -1,-0.1 -0.582 30.9-127.9 -83.3 132.0 -32.4 8.1 -20.8 15 29 A F + 0 0 14 -9,-2.5 2,-0.3 -2,-0.4 5,-0.2 -0.446 44.7 144.4 -70.9 147.7 -30.2 6.5 -23.5 16 30 A S B > -B 19 0B 62 3,-1.4 3,-1.2 -2,-0.1 5,-0.0 -0.911 68.5 -72.1-164.1-174.6 -30.8 7.9 -27.0 17 31 A I T 3 S+ 0 0 173 1,-0.3 3,-0.2 -2,-0.3 -1,-0.0 0.893 135.5 48.6 -61.7 -33.0 -28.9 8.7 -30.2 18 32 A S T 3 S+ 0 0 124 1,-0.2 2,-0.4 2,-0.0 -1,-0.3 0.529 110.2 54.6 -82.3 -8.1 -27.5 11.6 -28.2 19 33 A R B < S-B 16 0B 76 -3,-1.2 -3,-1.4 13,-0.0 -1,-0.2 -0.823 81.8-148.0-133.1 95.1 -26.5 9.5 -25.2 20 34 A R - 0 0 184 -2,-0.4 13,-0.4 -5,-0.2 2,-0.3 -0.173 13.6-123.0 -58.0 147.3 -24.3 6.5 -26.0 21 35 A K - 0 0 95 11,-0.1 2,-0.3 12,-0.1 11,-0.2 -0.732 29.8-178.6 -96.4 144.5 -24.5 3.3 -24.1 22 36 A H E -C 31 0C 25 9,-1.8 9,-3.3 -2,-0.3 2,-0.4 -0.967 19.4-129.2-140.0 153.8 -21.4 1.8 -22.4 23 37 A H E -C 30 0C 69 -2,-0.3 2,-0.7 7,-0.2 7,-0.2 -0.843 12.4-134.8-107.6 139.6 -20.7 -1.4 -20.3 24 38 A C > - 0 0 1 5,-2.0 4,-2.1 -2,-0.4 27,-0.3 -0.837 15.2-150.3 -87.9 122.8 -19.0 -1.6 -16.9 25 39 A R T 4 S+ 0 0 96 25,-3.1 26,-0.2 -2,-0.7 -1,-0.1 0.629 91.5 51.7 -69.4 -12.0 -16.6 -4.5 -17.3 26 40 A N T 4 S+ 0 0 56 24,-0.3 -1,-0.2 3,-0.1 25,-0.1 0.802 127.4 14.0 -93.8 -36.5 -16.9 -5.3 -13.6 27 41 A C T 4 S- 0 0 49 -3,-0.2 -2,-0.2 2,-0.1 24,-0.1 0.411 91.4-130.8-119.2 -5.1 -20.6 -5.5 -13.1 28 42 A G < + 0 0 9 -4,-2.1 -3,-0.1 1,-0.2 -26,-0.1 0.434 57.6 137.2 71.8 -1.3 -21.9 -5.7 -16.7 29 43 A H - 0 0 52 -6,-0.1 -5,-2.0 1,-0.1 2,-0.5 -0.367 58.2-107.1 -77.7 159.5 -24.5 -3.0 -16.4 30 44 A I E +C 23 0C 7 -7,-0.2 -21,-2.2 -23,-0.1 2,-0.3 -0.761 43.0 175.0 -91.4 127.3 -25.1 -0.4 -19.0 31 45 A F E -C 22 0C 6 -9,-3.3 -9,-1.8 -2,-0.5 2,-0.1 -0.888 32.2-112.0-129.4 158.5 -24.0 3.2 -18.2 32 46 A C - 0 0 3 -2,-0.3 4,-0.5 -11,-0.2 3,-0.3 -0.357 43.3-103.1 -78.7 168.3 -23.8 6.6 -19.9 33 47 A N S > S+ 0 0 84 -13,-0.4 3,-1.0 1,-0.2 -1,-0.1 0.868 118.2 56.6 -64.6 -37.3 -20.3 7.9 -20.5 34 48 A T G > S+ 0 0 110 1,-0.2 3,-0.6 2,-0.1 -1,-0.2 0.841 107.0 48.8 -66.2 -30.9 -20.3 10.4 -17.7 35 49 A C G 3 S+ 0 0 7 -3,-0.3 18,-1.5 1,-0.2 -1,-0.2 0.512 115.7 43.5 -87.0 -2.7 -21.0 7.7 -15.1 36 50 A S G < + 0 0 1 -3,-1.0 -1,-0.2 -4,-0.5 15,-0.2 -0.213 67.1 133.4-135.9 46.7 -18.3 5.3 -16.4 37 51 A S < + 0 0 85 -3,-0.6 2,-0.4 13,-0.1 15,-0.1 0.329 51.2 85.4 -81.9 6.8 -15.3 7.6 -17.0 38 52 A N E -D 51 0D 43 13,-1.0 13,-2.8 -3,-0.1 2,-0.4 -0.879 52.7-166.2-114.7 147.9 -12.7 5.4 -15.3 39 53 A E E +D 50 0D 138 -2,-0.4 2,-0.3 11,-0.2 11,-0.2 -0.952 15.9 168.1-123.0 143.7 -10.6 2.5 -16.6 40 54 A L E -D 49 0D 27 9,-2.1 9,-2.3 -2,-0.4 2,-0.3 -0.972 44.4 -84.3-150.9 161.6 -8.7 0.1 -14.3 41 55 A A - 0 0 84 -2,-0.3 6,-0.0 7,-0.2 -2,-0.0 -0.558 47.2-172.3 -70.2 129.1 -6.9 -3.2 -14.5 42 56 A L > - 0 0 20 -2,-0.3 3,-2.6 5,-0.3 5,-0.1 -0.984 27.4-123.3-127.8 122.4 -9.5 -6.0 -14.1 43 57 A P T 3 S+ 0 0 127 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.775 106.8 50.9 -29.3 -63.8 -8.5 -9.6 -13.7 44 58 A S T 3 S+ 0 0 107 2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.768 106.6 75.4 -54.5 -20.2 -10.4 -11.2 -16.6 45 59 A Y < - 0 0 91 -3,-2.6 -3,-0.2 1,-0.1 4,-0.1 -0.650 65.5-147.1-104.2 153.4 -8.9 -8.5 -19.0 46 60 A P S S+ 0 0 130 0, 0.0 -1,-0.1 0, 0.0 3,-0.0 0.805 86.5 28.7 -78.3 -40.0 -5.5 -7.7 -20.8 47 61 A K S S- 0 0 164 1,-0.1 -5,-0.3 -5,-0.1 -7,-0.1 -0.844 105.9 -72.2-122.5 162.2 -5.7 -3.9 -20.8 48 62 A P - 0 0 77 0, 0.0 2,-0.3 0, 0.0 -7,-0.2 -0.254 57.3-155.9 -52.9 139.0 -7.4 -1.5 -18.4 49 63 A V E -D 40 0D 14 -9,-2.3 -9,-2.1 -4,-0.1 2,-0.2 -0.819 18.8 -92.3-120.6 162.6 -11.2 -1.6 -18.9 50 64 A R E +D 39 0D 57 -2,-0.3 -25,-3.1 -11,-0.2 2,-0.3 -0.488 43.4 176.7 -76.5 135.6 -14.1 0.8 -18.4 51 65 A V E -D 38 0D 0 -13,-2.8 -13,-1.0 -27,-0.3 -27,-0.1 -0.971 29.5-110.7-137.8 152.9 -16.0 0.6 -15.1 52 66 A C > - 0 0 3 -2,-0.3 4,-2.2 -16,-0.1 -16,-0.2 -0.277 40.3-102.6 -73.7 168.0 -18.8 2.6 -13.4 53 67 A D H > S+ 0 0 52 -18,-1.5 4,-2.4 2,-0.2 5,-0.2 0.859 119.0 53.9 -61.5 -38.5 -18.2 4.8 -10.4 54 68 A S H > S+ 0 0 79 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.977 113.5 40.4 -59.6 -58.9 -19.5 2.4 -7.9 55 69 A C H > S+ 0 0 6 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.821 112.1 58.8 -58.3 -34.2 -17.3 -0.5 -9.1 56 70 A H H < S+ 0 0 41 -4,-2.2 4,-0.4 1,-0.2 -1,-0.2 0.942 110.9 40.7 -62.0 -45.8 -14.5 2.0 -9.4 57 71 A T H >X S+ 0 0 96 -4,-2.4 3,-0.9 1,-0.2 4,-0.5 0.885 112.7 55.6 -67.9 -40.9 -14.8 2.9 -5.7 58 72 A L H >< S+ 0 0 115 -4,-2.7 3,-0.7 1,-0.2 -2,-0.2 0.918 111.7 43.3 -58.2 -45.5 -15.3 -0.8 -4.7 59 73 A L T 3< S+ 0 0 75 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.403 104.5 62.5 -84.7 -0.4 -12.1 -1.8 -6.4 60 74 A L T <4 0 0 118 -3,-0.9 -1,-0.2 -4,-0.4 -2,-0.2 0.500 360.0 360.0-100.6 -2.4 -9.9 1.0 -5.2 61 75 A Q << 0 0 223 -3,-0.7 -3,-0.0 -4,-0.5 -4,-0.0 0.040 360.0 360.0 -77.4 360.0 -10.3 0.1 -1.5