==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER APOPTOSIS 24-FEB-05 1YYB . COMPND 2 MOLECULE: PROGRAMMED CELL DEATH PROTEIN 5; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.S.LIU,Y.G.FENG,H.W.YAO,J.F.WANG . 26 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2877.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 21 80.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 61.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S >> 0 0 91 0, 0.0 4,-3.0 0, 0.0 5,-0.7 0.000 360.0 360.0 360.0 42.4 -34.3 -1.0 -3.1 2 2 A A H >5 + 0 0 99 1,-0.2 4,-1.0 2,-0.2 5,-0.1 0.949 360.0 12.3 -44.7 -66.0 -33.7 -0.1 0.5 3 3 A D H >5S+ 0 0 100 2,-0.2 4,-2.4 3,-0.1 -1,-0.2 0.836 129.6 59.6 -81.1 -37.5 -30.4 -2.0 0.7 4 4 A E H >5S+ 0 0 124 2,-0.2 4,-1.6 1,-0.2 5,-0.2 0.956 104.7 47.2 -56.3 -56.8 -30.1 -2.4 -3.1 5 5 A E H >X5S+ 0 0 111 -4,-3.0 4,-1.4 1,-0.3 3,-1.0 0.953 117.0 43.6 -51.1 -54.6 -30.2 1.3 -3.8 6 6 A L H 3XS+ 0 0 140 -4,-1.9 4,-1.8 -5,-0.5 5,-0.8 0.814 110.4 54.2 -81.2 -31.0 -20.6 0.0 -4.0 12 12 A Q H X5S+ 0 0 121 -4,-1.4 4,-1.0 -6,-0.3 5,-0.2 0.967 122.0 28.5 -65.3 -50.9 -20.2 3.2 -6.0 13 13 A R H X5S+ 0 0 187 -4,-2.2 4,-1.1 3,-0.1 -2,-0.2 0.809 131.3 41.5 -76.9 -33.0 -18.2 4.8 -3.2 14 14 A L H X5S+ 0 0 62 -4,-1.9 4,-3.9 -5,-0.2 5,-0.3 0.958 114.1 46.4 -80.4 -57.3 -16.8 1.5 -1.9 15 15 A A H X5S+ 0 0 49 -4,-1.8 4,-1.1 -5,-0.2 -3,-0.2 0.920 116.8 46.0 -52.1 -49.2 -16.0 -0.4 -5.1 16 16 A E H X< S+ 0 0 112 -4,-1.1 3,-0.9 1,-0.2 -2,-0.2 0.944 113.4 51.9 -61.0 -49.8 -12.3 3.4 -3.5 18 18 A Q H >< S+ 0 0 105 -4,-3.9 3,-0.7 1,-0.3 -1,-0.2 0.718 106.5 57.9 -60.2 -20.0 -11.5 -0.3 -2.8 19 19 A A H 3< S+ 0 0 76 -4,-1.1 -1,-0.3 -3,-0.4 -2,-0.2 0.804 105.2 47.7 -80.1 -31.2 -10.2 -0.3 -6.4 20 20 A K T << S+ 0 0 188 -4,-1.2 -1,-0.2 -3,-0.9 -2,-0.2 -0.019 93.6 114.0 -98.7 29.1 -7.7 2.4 -5.8 21 21 A H < + 0 0 144 -3,-0.7 2,-0.2 -5,-0.1 -3,-0.1 -0.206 29.6 116.8 -89.1-176.5 -6.4 0.8 -2.6 22 22 A G - 0 0 64 1,-0.1 -2,-0.0 -2,-0.1 -3,-0.0 -0.709 36.9-149.8 139.1 169.6 -3.0 -0.7 -1.9 23 23 A D + 0 0 148 -2,-0.2 -1,-0.1 1,-0.0 -2,-0.0 -0.321 18.0 166.6-176.6 82.6 0.1 -0.4 0.3 24 24 A P - 0 0 115 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 0.902 27.6-155.9 -70.0 -42.2 3.5 -1.5 -1.0 25 25 A G 0 0 65 1,-0.1 -2,-0.0 0, 0.0 0, 0.0 0.914 360.0 360.0 65.3 43.8 5.5 0.2 1.7 26 26 A D 0 0 215 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.434 360.0 360.0 -84.0 360.0 8.7 0.5 -0.3