==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 14-MAR-05 1Z3R . COMPND 2 MOLECULE: POLYPROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: OMSK HEMORRHAGIC FEVER VIRUS; . AUTHOR D.E.VOLK,L.CHAVEZ,D.W.BEASLEY,A.D.BARRETT,D.G.GORENSTEIN . 99 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5299.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 63.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 38 38.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 16 16.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 2 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 138 0, 0.0 2,-0.3 0, 0.0 71,-0.1 0.000 360.0 360.0 360.0 -78.4 -12.4 44.7 -8.4 2 2 A S - 0 0 74 1,-0.1 2,-0.7 69,-0.0 68,-0.1 -0.248 360.0-138.2 -58.0 103.7 -15.2 45.0 -11.0 3 3 A K - 0 0 88 -2,-0.3 2,-1.5 1,-0.1 -1,-0.1 -0.504 22.9-136.2 -65.1 102.3 -14.8 42.1 -13.5 4 4 A G > + 0 0 3 -2,-0.7 3,-1.1 1,-0.2 -1,-0.1 -0.509 34.5 171.3 -82.3 87.1 -15.4 43.8 -16.9 5 5 A L T 3 S+ 0 0 134 -2,-1.5 -1,-0.2 1,-0.2 -2,-0.0 0.731 91.3 39.3 -48.8 -27.3 -17.7 41.8 -19.2 6 6 A T T 3 S+ 0 0 125 -3,-0.1 -1,-0.2 2,-0.0 -2,-0.1 0.407 86.5 120.8-112.4 -2.0 -17.7 45.0 -21.4 7 7 A Y < - 0 0 54 -3,-1.1 34,-0.1 1,-0.1 35,-0.0 -0.342 66.9-107.1 -68.9 147.5 -14.1 46.3 -21.1 8 8 A T - 0 0 120 32,-0.2 34,-2.8 1,-0.1 -1,-0.1 -0.285 46.0 -87.0 -66.4 154.4 -11.9 46.7 -24.3 9 9 A M B -a 42 0A 118 32,-0.2 34,-0.2 1,-0.1 2,-0.1 -0.294 40.1-118.5 -66.2 147.6 -9.1 44.1 -25.0 10 10 A a - 0 0 8 32,-2.7 2,-0.2 1,-0.1 -1,-0.1 -0.453 37.8 -87.5 -76.1 157.8 -5.6 44.6 -23.6 11 11 A D > - 0 0 64 -2,-0.1 3,-0.8 1,-0.1 26,-0.1 -0.475 32.7-135.9 -63.1 127.4 -2.4 44.9 -25.8 12 12 A K T 3 S+ 0 0 85 -2,-0.2 78,-2.9 1,-0.2 79,-0.8 0.662 98.7 42.1 -61.0 -21.1 -1.0 41.5 -26.7 13 13 A A T 3 S+ 0 0 78 76,-0.2 -1,-0.2 77,-0.1 76,-0.1 0.501 93.7 75.7-110.3 -8.7 2.7 42.5 -26.0 14 14 A K S < S+ 0 0 93 -3,-0.8 22,-3.0 77,-0.0 23,-0.2 0.206 75.2 110.5 -93.0 12.5 2.5 44.6 -22.8 15 15 A F E -D 35 0B 10 20,-0.2 2,-0.3 73,-0.2 20,-0.2 -0.583 40.8-176.2 -93.6 155.6 2.1 41.6 -20.4 16 16 A T E -D 34 0B 74 18,-2.2 18,-2.5 -2,-0.2 2,-0.7 -0.981 35.4-104.8-142.3 146.1 4.3 39.9 -17.7 17 17 A W E +D 33 0B 61 -2,-0.3 16,-0.3 16,-0.2 3,-0.2 -0.657 31.4 174.1 -74.8 110.1 3.6 36.8 -15.6 18 18 A K E S+ 0 0 104 14,-1.5 2,-0.3 -2,-0.7 15,-0.3 0.792 90.8 4.7 -74.1 -33.3 2.7 37.7 -12.0 19 19 A R E S-D 32 0B 104 13,-2.8 13,-2.9 -3,-0.1 -1,-0.4 -0.883 85.2-133.1-150.4 112.6 2.1 33.9 -11.6 20 20 A A E - 0 0 40 -2,-0.3 10,-0.1 -3,-0.2 73,-0.1 -0.310 49.5 -71.9 -59.2 153.3 2.8 31.5 -14.4 21 21 A P E S+ 0 0 4 0, 0.0 2,-0.3 0, 0.0 10,-0.2 -0.272 71.1 155.6 -49.1 121.4 0.1 28.9 -15.2 22 22 A T E -D 30 0B 65 8,-2.8 8,-2.5 -3,-0.1 2,-0.2 -0.911 44.9 -80.5-144.2 170.0 -0.1 26.2 -12.4 23 23 A D E -D 29 0B 34 -2,-0.3 6,-0.2 6,-0.2 74,-0.0 -0.530 23.2-143.8 -77.2 139.6 -2.5 23.7 -10.9 24 24 A S - 0 0 31 4,-2.8 5,-0.1 -2,-0.2 -1,-0.1 0.389 49.9-104.7 -72.1 -3.7 -5.1 24.9 -8.3 25 25 A G S S+ 0 0 61 3,-0.3 4,-0.1 0, 0.0 -2,-0.1 0.349 116.3 76.1 83.4 -2.7 -4.7 21.6 -6.3 26 26 A H S S- 0 0 146 2,-0.3 3,-0.1 73,-0.0 -3,-0.0 -0.034 118.3 -94.5-133.8 22.1 -8.1 20.8 -8.0 27 27 A D S S+ 0 0 69 1,-0.3 52,-0.4 72,-0.1 2,-0.2 0.522 94.3 112.4 69.8 9.3 -7.2 19.9 -11.7 28 28 A T - 0 0 12 50,-0.1 -4,-2.8 71,-0.0 2,-0.6 -0.711 68.5-120.3-104.1 161.5 -7.9 23.5 -12.8 29 29 A V E -DE 23 77B 0 48,-3.6 48,-2.3 -2,-0.2 2,-0.3 -0.920 25.4-170.9-117.6 109.2 -5.3 25.9 -14.0 30 30 A V E +DE 22 76B 14 -8,-2.5 -8,-2.8 -2,-0.6 2,-0.3 -0.778 12.2 162.7 -95.5 144.7 -4.6 29.2 -12.2 31 31 A M E - E 0 75B 0 44,-2.5 44,-2.3 -2,-0.3 2,-0.3 -0.964 17.0-157.2-150.8 169.1 -2.4 32.0 -13.5 32 32 A E E -DE 19 74B 39 -13,-2.9 -13,-2.8 -2,-0.3 -14,-1.5 -0.994 7.7-167.6-151.8 144.2 -1.8 35.7 -12.9 33 33 A V E -D 17 0B 0 40,-2.1 2,-0.3 -2,-0.3 -16,-0.2 -0.826 16.0-147.9-130.1 164.3 -0.4 38.7 -14.9 34 34 A A E -D 16 0B 29 -18,-2.5 -18,-2.2 -2,-0.3 2,-0.4 -0.969 26.0-154.8-131.8 144.9 0.9 42.3 -14.6 35 35 A F E -D 15 0B 15 -2,-0.3 -20,-0.2 -20,-0.2 -21,-0.0 -0.977 25.6-160.4-142.4 129.5 0.4 44.7 -17.5 36 36 A S S S+ 0 0 96 -22,-3.0 -21,-0.1 -2,-0.4 3,-0.1 0.405 73.0 75.2 -92.0 -0.8 2.0 47.9 -19.0 37 37 A G S S- 0 0 22 -23,-0.2 -2,-0.1 1,-0.2 -27,-0.1 -0.103 90.9 -25.8 -95.8-163.2 -1.0 49.0 -21.2 38 38 A T - 0 0 101 2,-0.1 -1,-0.2 1,-0.1 29,-0.1 0.005 61.5-114.6 -47.4 143.6 -4.4 50.7 -20.6 39 39 A K S S+ 0 0 80 1,-0.1 29,-0.2 -3,-0.1 2,-0.1 -0.996 96.0 32.2-121.9 120.7 -6.4 50.4 -17.3 40 40 A P S S+ 0 0 66 0, 0.0 2,-0.3 0, 0.0 28,-0.2 0.573 83.0 142.6 -80.6 169.5 -9.0 49.0 -17.5 41 41 A a E - B 0 67A 1 26,-2.0 26,-2.9 -2,-0.1 2,-0.4 -0.965 47.8-113.2-156.2 162.9 -8.8 46.2 -20.1 42 42 A R E -aB 9 66A 46 -34,-2.8 -32,-2.7 -2,-0.3 24,-0.3 -0.818 40.3-116.0 -89.1 128.8 -10.0 42.6 -20.8 43 43 A I - 0 0 6 22,-2.2 2,-2.4 -2,-0.4 -34,-0.1 -0.527 14.3-135.3 -71.5 119.9 -7.1 40.0 -20.9 44 44 A P + 0 0 32 0, 0.0 45,-2.9 0, 0.0 2,-0.2 -0.463 46.4 169.7 -72.2 68.5 -6.6 38.4 -24.4 45 45 A V E +G 88 0C 24 -2,-2.4 2,-0.2 43,-0.2 43,-0.2 -0.524 9.7 151.9 -79.6 152.5 -6.3 34.9 -22.7 46 46 A R E -G 87 0C 52 41,-1.8 41,-2.8 -2,-0.2 2,-0.4 -0.890 33.8-143.8-167.2 158.4 -6.3 31.5 -24.5 47 47 A A E -G 86 0C 0 39,-0.3 10,-3.2 -2,-0.2 2,-0.5 -0.988 22.0-163.6-123.7 116.5 -4.9 28.0 -24.0 48 48 A V E -GH 85 56C 2 37,-3.0 37,-3.1 -2,-0.4 8,-0.2 -0.904 15.5-129.5-114.2 117.0 -3.9 26.4 -27.4 49 49 A A E > -G 84 0C 27 6,-0.8 3,-2.6 -2,-0.5 2,-0.4 -0.251 39.7 -73.9 -70.0 154.7 -3.3 22.6 -27.5 50 50 A H T 3 S+ 0 0 148 33,-2.4 -1,-0.2 1,-0.3 34,-0.1 -0.224 121.4 11.3 -48.5 99.8 -0.3 20.8 -28.9 51 51 A G T 3 S+ 0 0 78 -2,-0.4 -1,-0.3 -3,-0.1 -2,-0.1 0.206 116.4 71.9 113.5 -9.6 -0.6 21.0 -32.7 52 52 A A X + 0 0 38 -3,-2.6 3,-1.5 3,-0.1 -3,-0.3 -0.664 46.3 171.1-136.5 78.5 -3.4 23.7 -33.1 53 53 A P T 3 S+ 0 0 75 0, 0.0 -1,-0.1 0, 0.0 -3,-0.1 0.600 78.9 60.5 -68.1 -11.4 -2.2 27.2 -32.1 54 54 A D T 3 S+ 0 0 143 1,-0.1 2,-0.7 -5,-0.1 -6,-0.0 0.678 89.0 83.0 -79.7 -27.1 -5.5 28.8 -33.4 55 55 A V < - 0 0 81 -3,-1.5 -6,-0.8 -6,-0.2 2,-0.4 -0.781 64.8-151.1-103.2 107.7 -7.8 26.9 -31.0 56 56 A D B +H 48 0C 71 -2,-0.7 -8,-0.2 -8,-0.2 30,-0.0 -0.610 14.9 178.3 -66.1 123.2 -8.5 28.0 -27.4 57 57 A V + 0 0 43 -10,-3.2 2,-0.6 -2,-0.4 -1,-0.1 0.263 37.4 127.2-106.0 3.4 -9.3 25.0 -25.2 58 58 A A - 0 0 16 -11,-0.4 2,-0.8 21,-0.1 21,-0.2 -0.548 41.7-166.5 -70.2 114.6 -9.7 27.0 -22.0 59 59 A M E -F 78 0B 132 19,-3.0 19,-2.4 -2,-0.6 2,-0.1 -0.871 28.6-134.0 -91.6 101.2 -13.0 26.5 -20.1 60 60 A L E -F 77 0B 59 -2,-0.8 17,-0.3 17,-0.3 4,-0.1 -0.374 26.9-177.2 -62.4 129.9 -12.8 29.5 -17.6 61 61 A I S S+ 0 0 85 15,-2.3 16,-0.2 -32,-0.2 -1,-0.1 0.792 77.5 49.0 -93.9 -40.6 -13.6 28.7 -14.0 62 62 A T S S- 0 0 39 14,-2.0 14,-0.0 1,-0.2 13,-0.0 -0.546 107.5 -83.2 -85.6 163.6 -13.3 32.4 -12.9 63 63 A P - 0 0 73 0, 0.0 13,-0.2 0, 0.0 -1,-0.2 -0.088 67.8 -55.1 -58.5 168.1 -15.1 35.1 -14.9 64 64 A N S S- 0 0 44 1,-0.1 2,-0.1 -61,-0.1 11,-0.0 -0.225 76.7-119.7 -34.2 102.0 -14.0 36.9 -18.1 65 65 A P - 0 0 6 0, 0.0 -22,-2.2 0, 0.0 2,-0.3 -0.311 35.5-176.3 -79.7 145.3 -10.6 38.2 -16.8 66 66 A T E -B 42 0A 1 8,-0.3 7,-2.9 -24,-0.3 2,-0.4 -0.889 24.6-135.1-134.3 156.8 -9.6 41.8 -16.6 67 67 A M E +BC 41 72A 16 -26,-2.9 -26,-2.0 5,-0.3 2,-0.2 -0.973 39.1 168.8-118.4 128.7 -6.6 44.0 -15.7 68 68 A E - 0 0 10 3,-1.0 3,-0.3 -2,-0.4 -65,-0.0 -0.683 49.9-117.6-135.7 172.4 -7.4 47.0 -13.5 69 69 A N S S+ 0 0 130 -2,-0.2 3,-0.1 1,-0.2 -30,-0.0 0.461 116.1 45.0 -95.9 -3.8 -6.1 49.8 -11.3 70 70 A N S S- 0 0 78 -68,-0.1 2,-0.3 1,-0.1 -1,-0.2 -0.331 135.2 -45.1-133.7 42.2 -7.9 48.3 -8.2 71 71 A G S S+ 0 0 45 -3,-0.3 -3,-1.0 -70,-0.1 -1,-0.1 -0.940 79.5 124.7 129.6-150.3 -7.0 44.6 -8.6 72 72 A G B +C 67 0A 18 -2,-0.3 -5,-0.3 -5,-0.2 3,-0.1 -0.050 27.2 98.8 89.1 175.5 -7.1 42.4 -11.7 73 73 A G + 0 0 0 -7,-2.9 -40,-2.1 1,-0.3 2,-0.3 0.269 61.2 122.9 87.9 -9.2 -4.7 40.1 -13.7 74 74 A F E +E 32 0B 70 -8,-0.3 2,-0.3 -42,-0.2 -8,-0.3 -0.652 33.4 173.3 -91.9 143.9 -6.0 36.9 -12.1 75 75 A I E -E 31 0B 0 -44,-2.3 -44,-2.5 -2,-0.3 2,-0.3 -0.996 16.0-172.9-147.1 140.6 -7.4 33.9 -14.1 76 76 A E E +E 30 0B 42 -2,-0.3 -15,-2.3 -46,-0.2 -14,-2.0 -0.992 20.5 154.2-135.5 135.5 -8.6 30.3 -13.5 77 77 A M E -EF 29 60B 0 -48,-2.3 -48,-3.6 -2,-0.3 2,-0.3 -0.912 33.7-125.5-144.7 166.4 -9.6 27.8 -16.3 78 78 A Q E + F 0 59B 80 -19,-2.4 -19,-3.0 -2,-0.3 -50,-0.1 -0.943 28.8 179.7-124.5 148.1 -9.8 24.1 -17.0 79 79 A L - 0 0 11 -52,-0.4 -21,-0.1 -2,-0.3 3,-0.1 -0.913 35.3 -84.7-142.4 158.6 -8.1 22.3 -19.9 80 80 A P - 0 0 62 0, 0.0 17,-0.3 0, 0.0 -23,-0.0 -0.558 56.6 -98.5 -70.4 129.2 -7.6 18.8 -21.6 81 81 A P S S+ 0 0 77 0, 0.0 2,-0.2 0, 0.0 17,-0.2 -0.259 89.1 63.3 -46.8 127.4 -4.7 16.7 -20.0 82 82 A G E S- I 0 97C 38 15,-1.1 15,-2.8 2,-0.1 2,-0.5 -0.848 99.2 -31.6 137.5 179.0 -1.7 17.2 -22.3 83 83 A D E + I 0 96C 24 13,-0.3 -33,-2.4 -2,-0.2 2,-0.4 -0.646 60.3 176.2 -74.8 117.9 0.6 19.9 -23.6 84 84 A N E -GI 49 95C 2 11,-2.4 11,-2.9 -2,-0.5 2,-0.8 -0.994 26.6-141.0-127.8 126.3 -1.2 23.3 -23.8 85 85 A I E -GI 48 94C 28 -37,-3.1 -37,-3.0 -2,-0.4 2,-0.6 -0.786 22.1-156.6 -88.3 105.9 0.4 26.6 -24.7 86 86 A I E -GI 47 93C 0 7,-2.1 7,-1.2 -2,-0.8 2,-0.3 -0.796 12.0-166.9 -94.4 116.5 -1.3 29.2 -22.4 87 87 A Y E -GI 46 92C 40 -41,-2.8 -41,-1.8 -2,-0.6 2,-0.4 -0.811 27.2-171.8-102.8 146.6 -1.2 32.8 -23.8 88 88 A V E > S-GI 45 91C 0 3,-3.0 3,-1.1 -2,-0.3 2,-0.6 -0.881 87.6 -45.7-127.2 88.7 -1.9 36.2 -22.2 89 89 A G T 3 S- 0 0 0 -45,-2.9 -76,-0.2 -2,-0.4 -77,-0.2 -0.778 119.9 -33.5 81.4-117.5 -1.7 38.2 -25.5 90 90 A E T 3 S+ 0 0 99 -78,-2.9 2,-0.3 -2,-0.6 -1,-0.2 0.452 117.0 105.3-109.1 -9.8 1.4 36.8 -27.2 91 91 A L E < -I 88 0C 51 -3,-1.1 -3,-3.0 -79,-0.8 2,-0.2 -0.586 59.8-174.6 -62.5 124.8 3.2 36.3 -23.8 92 92 A K E -I 87 0C 87 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.710 25.8-163.5-120.4 169.0 3.0 32.4 -23.4 93 93 A H E -I 86 0C 64 -7,-1.2 -7,-2.1 -2,-0.2 2,-0.7 -0.962 27.9-119.1-145.2 156.4 3.8 29.6 -21.1 94 94 A Q E -I 85 0C 70 -2,-0.3 2,-0.7 -9,-0.2 -9,-0.2 -0.858 33.0-170.9 -96.4 105.2 4.1 25.8 -21.6 95 95 A W E -I 84 0C 31 -11,-2.9 -11,-2.4 -2,-0.7 2,-1.2 -0.868 16.1-164.0-110.8 104.4 1.4 24.0 -19.5 96 96 A F E -I 83 0C 140 -2,-0.7 -13,-0.3 -13,-0.2 2,-0.1 -0.727 30.8-145.8 -78.5 91.1 1.5 20.2 -19.2 97 97 A Q E -I 82 0C 12 -15,-2.8 -15,-1.1 -2,-1.2 2,-0.3 -0.377 14.7-160.6 -69.8 143.8 -2.1 19.8 -17.9 98 98 A K 0 0 96 -17,-0.2 -19,-0.2 -2,-0.1 -1,-0.0 -0.935 360.0 360.0-127.2 147.6 -3.2 17.1 -15.4 99 99 A G 0 0 97 -2,-0.3 -72,-0.1 -19,-0.0 -71,-0.0 -0.930 360.0 360.0 149.2 360.0 -6.8 15.9 -14.7