==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 18-MAR-05 1Z5F . COMPND 2 MOLECULE: RC-RNASE 3; . SOURCE 2 ORGANISM_SCIENTIFIC: RANA CATESBEIANA; . AUTHOR Y.C.LOU,Y.C.HUANG,Y.R.PAN,C.CHEN,Y.D.LIAO . 105 1 4 4 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6783.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 59.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 24 22.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A X 0 0 77 0, 0.0 2,-0.3 0, 0.0 96,-0.1 0.000 360.0 360.0 360.0 -18.8 -6.7 11.0 1.6 2 2 A D > - 0 0 98 94,-0.4 4,-2.8 1,-0.1 5,-0.4 -0.856 360.0-125.0-169.1 129.8 -6.8 10.7 -2.3 3 3 A W H > S+ 0 0 42 -2,-0.3 4,-0.8 3,-0.2 5,-0.1 0.852 111.1 60.0 -49.3 -30.6 -6.7 7.8 -4.7 4 4 A E H >> S+ 0 0 141 2,-0.2 3,-2.3 3,-0.1 4,-1.2 0.984 114.8 26.7 -62.3 -79.2 -3.8 9.7 -6.3 5 5 A T H >>>S+ 0 0 48 1,-0.3 4,-2.7 2,-0.3 3,-1.9 0.949 118.4 60.9 -50.0 -48.6 -1.3 9.9 -3.4 6 6 A F H 3<5S+ 0 0 2 -4,-2.8 -1,-0.3 1,-0.3 -2,-0.2 0.817 108.1 46.5 -50.0 -24.1 -2.9 6.7 -1.9 7 7 A Q H <<5S+ 0 0 40 -3,-2.3 -1,-0.3 -4,-0.8 -2,-0.3 0.691 116.7 44.1 -90.3 -20.2 -1.7 5.2 -5.2 8 8 A K H <<5S+ 0 0 129 -3,-1.9 -2,-0.2 -4,-1.2 -3,-0.2 0.907 128.2 20.2 -90.1 -51.0 1.8 6.8 -4.9 9 9 A K T <5S+ 0 0 44 -4,-2.7 -3,-0.2 -5,-0.1 -2,-0.1 0.915 130.0 42.0 -87.5 -48.7 2.7 6.2 -1.2 10 10 A H S S- 0 0 40 23,-0.1 3,-0.6 1,-0.1 -1,-0.1 -0.987 70.7-124.4-163.9 154.2 7.1 -4.0 -7.7 15 15 A K T 3 S+ 0 0 91 -2,-0.3 2,-0.4 1,-0.3 -1,-0.1 0.757 113.9 47.9 -74.1 -21.3 7.0 -6.6 -5.0 16 16 A K T 3 S- 0 0 144 50,-0.1 -1,-0.3 -3,-0.1 63,-0.0 -0.523 84.1-175.8-116.2 64.4 10.6 -5.7 -4.0 17 17 A V < - 0 0 5 -3,-0.6 2,-1.1 -2,-0.4 3,-0.2 0.013 39.2-105.1 -51.9 169.7 10.3 -1.9 -3.9 18 18 A K >> - 0 0 124 1,-0.2 3,-3.4 2,-0.1 4,-2.9 -0.500 40.6-179.7 -97.9 64.9 13.5 0.1 -3.2 19 19 A a H 3>>S+ 0 0 8 -2,-1.1 4,-1.2 1,-0.3 5,-0.7 0.827 76.1 70.6 -33.3 -42.1 12.7 0.9 0.4 20 20 A D H 3>5S+ 0 0 87 1,-0.2 4,-1.0 -3,-0.2 -1,-0.3 0.898 118.9 18.4 -47.6 -41.0 16.0 2.8 0.5 21 21 A V H <>5S+ 0 0 63 -3,-3.4 4,-1.5 2,-0.2 -2,-0.2 0.735 113.1 72.8-102.0 -28.9 14.4 5.4 -1.7 22 22 A E H <5S+ 0 0 26 -4,-2.9 -3,-0.2 1,-0.2 -2,-0.2 0.651 122.0 18.2 -60.8 -7.7 10.8 4.5 -1.1 23 23 A M H <5S+ 0 0 0 -4,-1.2 7,-3.8 -5,-0.4 6,-0.7 0.587 124.7 53.0-129.7 -40.8 11.5 6.1 2.3 24 24 A A H < - 0 0 102 -2,-0.3 4,-1.9 1,-0.1 3,-0.2 -0.644 34.1-116.9 -88.5 144.7 -2.0 -2.5 -11.0 41 41 A P H >>S+ 0 0 76 0, 0.0 4,-2.9 0, 0.0 5,-0.5 0.905 112.4 51.5 -44.5 -55.6 -4.1 0.7 -11.1 42 42 A G H >5S+ 0 0 33 1,-0.3 4,-1.9 2,-0.2 5,-0.2 0.948 111.7 46.9 -52.6 -50.1 -7.1 -0.9 -13.1 43 43 A R H >5S+ 0 0 114 2,-0.2 4,-1.4 3,-0.2 -1,-0.3 0.830 115.2 49.0 -63.1 -28.7 -7.3 -3.8 -10.6 44 44 A V H <5S+ 0 0 18 -4,-1.9 3,-0.3 -3,-0.3 4,-0.3 0.978 117.1 36.2 -76.2 -57.9 -7.1 -1.3 -7.7 45 45 A K H >X5S+ 0 0 98 -4,-2.9 4,-0.6 1,-0.2 3,-0.6 0.761 116.1 59.9 -66.4 -20.0 -9.8 1.2 -8.9 46 46 A A H >< S+ 0 0 114 4,-0.3 4,-0.5 2,-0.0 -1,-0.2 -0.870 99.9 23.8-140.0 174.1 19.8 -1.4 12.2 73 73 A L T 4 S- 0 0 109 -2,-0.3 3,-0.2 2,-0.1 0, 0.0 0.130 87.8 -91.0 52.9 174.9 22.0 1.4 10.8 74 74 A P T 4 S+ 0 0 103 0, 0.0 -1,-0.1 0, 0.0 2,-0.1 0.894 114.1 16.3 -89.5 -47.7 20.6 5.0 10.7 75 75 A b T 4 S+ 0 0 48 2,-0.0 2,-0.3 -51,-0.0 -2,-0.1 -0.432 100.1 105.6-125.4 60.9 18.8 5.2 7.3 76 76 A H < - 0 0 78 -4,-0.5 2,-0.3 -3,-0.2 -4,-0.3 -0.972 42.7-168.3-136.5 151.5 18.5 1.6 6.1 77 77 A Y - 0 0 15 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.927 18.0-124.2-137.1 163.6 15.5 -0.8 5.9 78 78 A K E -C 69 0B 119 -9,-1.7 -9,-1.2 -2,-0.3 2,-0.6 -0.778 26.1-119.2-106.9 152.4 14.9 -4.5 5.3 79 79 A L E +C 68 0B 80 -2,-0.3 2,-0.4 -11,-0.2 -11,-0.2 -0.794 41.9 159.4 -94.1 123.2 12.6 -5.9 2.6 80 80 A S E +C 67 0B 62 -13,-1.9 -13,-0.6 -2,-0.6 2,-0.3 -0.964 5.5 165.1-145.1 125.1 9.7 -8.0 3.9 81 81 A S E +C 66 0B 54 -2,-0.4 2,-0.3 -15,-0.2 -17,-0.1 -0.949 3.9 171.8-137.4 159.0 6.4 -8.8 2.0 82 82 A S E -C 65 0B 65 -17,-1.0 -17,-1.8 -2,-0.3 2,-0.6 -0.987 33.2-109.7-160.4 163.1 3.6 -11.3 2.5 83 83 A T E +C 64 0B 94 -2,-0.3 2,-0.3 -19,-0.2 -19,-0.2 -0.882 53.7 131.8-105.2 119.3 0.1 -12.1 1.1 84 84 A N E -C 63 0B 30 -21,-1.4 -21,-0.5 -2,-0.6 -22,-0.2 -0.991 58.4 -90.5-160.3 153.9 -2.9 -11.4 3.3 85 85 A T - 0 0 34 -24,-0.5 17,-0.4 -2,-0.3 2,-0.4 -0.294 42.5-158.2 -64.7 153.4 -6.3 -9.7 3.1 86 86 A I - 0 0 9 15,-0.2 -27,-1.4 -24,-0.1 2,-0.4 -0.996 12.6-131.4-139.3 136.1 -6.2 -6.0 4.1 87 87 A d E +DE 58 100C 1 15,-0.9 12,-1.2 13,-0.6 13,-1.1 -0.669 35.8 163.0 -86.4 136.6 -9.0 -3.7 5.3 88 88 A I E -DE 57 98C 26 -31,-1.8 -31,-3.0 -2,-0.4 2,-0.4 -0.991 34.3-122.2-149.3 155.1 -9.3 -0.4 3.5 89 89 A T E -DE 56 97C 24 8,-1.0 8,-1.7 -2,-0.3 7,-1.6 -0.857 29.0-176.8-104.7 135.3 -12.0 2.4 3.1 90 90 A c E -DE 55 95C 0 -35,-1.7 -35,-1.6 -2,-0.4 -38,-0.1 -0.944 13.8-144.3-128.9 150.7 -13.3 3.3 -0.4 91 91 A V - 0 0 36 3,-1.9 -1,-0.1 -2,-0.3 -36,-0.1 0.157 67.9 -39.2 -91.4-147.3 -15.7 6.0 -1.6 92 92 A N S S- 0 0 111 1,-0.2 -41,-0.2 2,-0.0 -42,-0.2 0.861 131.3 -32.9 -47.5 -34.9 -18.3 5.8 -4.4 93 93 A Q S S+ 0 0 107 1,-0.2 -1,-0.2 -44,-0.1 -45,-0.2 0.130 116.5 94.2 179.8 42.6 -15.5 3.9 -6.3 94 94 A L - 0 0 66 -46,-0.2 -3,-1.9 -47,-0.1 2,-0.3 -0.904 60.9-138.4-148.3 115.6 -12.1 5.2 -5.4 95 95 A P E +E 90 0C 2 0, 0.0 -5,-0.2 0, 0.0 3,-0.1 -0.559 39.7 145.8 -75.4 129.7 -9.8 3.7 -2.6 96 96 A I E + 0 0 28 -7,-1.6 -94,-0.4 -2,-0.3 2,-0.4 0.439 48.8 69.6-142.6 -7.3 -8.0 6.3 -0.5 97 97 A H E -E 89 0C 101 -8,-1.7 -8,-1.0 -96,-0.1 2,-0.7 -0.939 58.4-151.5-121.7 142.6 -7.7 4.9 3.1 98 98 A F E -E 88 0C 43 -2,-0.4 -10,-0.2 -10,-0.2 3,-0.1 -0.865 11.1-174.6-110.4 100.8 -5.6 2.0 4.4 99 99 A A E - 0 0 58 -12,-1.2 2,-0.3 -2,-0.7 -1,-0.2 0.991 50.3 -77.0 -58.0 -74.7 -7.2 0.4 7.4 100 100 A G E -E 87 0C 24 -13,-1.1 -13,-0.6 2,-0.2 -1,-0.2 -0.923 53.7 -59.6-168.8-167.3 -4.5 -2.1 8.5 101 101 A V S S+ 0 0 81 -2,-0.3 -15,-0.2 -15,-0.2 -16,-0.1 -0.560 97.2 6.2 -91.4 159.0 -2.9 -5.5 7.6 102 102 A G S S- 0 0 20 -17,-0.4 -15,-0.9 -2,-0.2 -2,-0.2 -0.104 118.0 -24.2 63.0-170.1 -4.8 -8.8 7.5 103 103 A S S S- 0 0 80 -17,-0.2 -16,-0.2 1,-0.1 -45,-0.0 -0.073 98.5 -61.3 -63.4 173.5 -8.6 -8.7 8.0 104 104 A d 0 0 52 1,-0.2 -1,-0.1 -18,-0.1 -46,-0.0 -0.158 360.0 360.0 -54.2 154.1 -10.1 -5.7 9.9 105 105 A P 0 0 186 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.654 360.0 360.0 -38.5 360.0 -8.9 -5.4 13.5