==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 21-MAR-05 1Z66 . COMPND 2 MOLECULE: MAJOR ENVELOPE PROTEIN E; . SOURCE 2 ORGANISM_SCIENTIFIC: LANGAT VIRUS; . AUTHOR M.MUKHERJEE,K.DUTTA,M.A.WHITE,D.COWBURN,R.O.FOX . 93 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5316.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 69.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 35 37.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 19 20.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 0 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 303 A T 0 0 124 0, 0.0 2,-0.3 0, 0.0 32,-0.1 0.000 360.0 360.0 360.0 57.2 17.7 -4.8 -3.8 2 304 A Y + 0 0 154 34,-0.1 2,-0.3 31,-0.1 34,-0.1 -0.401 360.0 95.0 -60.8 116.3 15.5 -2.0 -5.3 3 305 A T S S- 0 0 67 31,-0.4 34,-1.6 -2,-0.3 2,-0.6 -0.889 86.7 -21.6-173.5-166.6 12.7 -3.9 -7.1 4 306 A V B S-a 37 0A 94 -2,-0.3 34,-0.2 32,-0.2 3,-0.1 -0.584 84.5-115.8 -61.2 114.9 9.2 -5.2 -6.6 5 307 A a - 0 0 5 32,-1.5 -1,-0.1 -2,-0.6 -3,-0.1 -0.235 26.1 -99.4 -67.4 144.6 9.3 -5.2 -2.8 6 308 A D >> - 0 0 69 1,-0.1 3,-2.0 32,-0.1 4,-0.7 -0.317 28.0-121.2 -59.8 141.6 8.9 -8.4 -0.8 7 309 A K T 34 S+ 0 0 119 1,-0.3 78,-0.6 2,-0.2 79,-0.2 0.564 113.0 48.6 -65.2 -11.8 5.5 -9.2 0.5 8 310 A T T 34 S+ 0 0 90 1,-0.1 -1,-0.3 77,-0.1 -2,-0.1 0.421 93.7 76.5-105.4 -1.1 6.9 -9.2 4.1 9 311 A K T <4 S+ 0 0 42 -3,-2.0 2,-0.3 21,-0.0 -2,-0.2 0.818 83.1 69.8 -83.8 -30.1 8.8 -5.9 3.8 10 312 A F < - 0 0 2 -4,-0.7 2,-0.3 20,-0.2 20,-0.2 -0.620 66.5-167.4 -86.9 147.9 5.9 -3.6 4.2 11 313 A T E -C 29 0B 64 18,-1.2 18,-1.9 -2,-0.3 2,-0.9 -0.981 36.7 -88.4-135.5 145.3 4.1 -3.3 7.4 12 314 A W E +C 28 0B 132 -2,-0.3 16,-0.2 1,-0.2 3,-0.2 -0.371 52.6 157.3 -53.5 96.4 0.7 -1.8 8.5 13 315 A K E S- 0 0 104 14,-2.2 15,-0.3 -2,-0.9 2,-0.2 0.774 81.9 -3.5 -87.8 -35.1 1.8 1.7 9.3 14 316 A R E S-C 27 0B 122 13,-2.6 13,-2.9 -3,-0.2 -1,-0.3 -0.809 76.3-133.7-159.1 113.7 -1.8 2.9 8.7 15 317 A A E - 0 0 28 -2,-0.2 10,-0.1 11,-0.2 74,-0.1 -0.311 60.0 -58.8 -62.7 153.0 -4.6 0.6 7.5 16 318 A P E S+ 0 0 2 0, 0.0 2,-0.3 0, 0.0 10,-0.3 -0.050 73.9 168.4 -41.8 119.1 -6.8 2.0 4.6 17 319 A T E -C 25 0B 50 8,-3.7 8,-3.9 -3,-0.2 75,-0.1 -0.986 45.3 -78.3-139.6 142.4 -8.3 5.3 6.0 18 320 A D E -C 24 0B 75 -2,-0.3 6,-0.3 6,-0.3 5,-0.0 -0.128 40.0-133.3 -40.7 130.8 -10.1 8.2 4.4 19 321 A S - 0 0 38 4,-2.9 5,-0.2 53,-0.2 -1,-0.2 0.729 44.9-101.0 -65.8 -23.8 -7.6 10.4 2.6 20 322 A G S S+ 0 0 70 3,-0.5 -1,-0.1 5,-0.0 4,-0.1 0.360 112.1 51.0 111.4 -0.6 -9.0 13.5 4.0 21 323 A H S S- 0 0 158 2,-0.3 3,-0.1 0, 0.0 -3,-0.1 0.603 126.6 -62.7-126.9 -56.5 -10.9 14.5 0.9 22 324 A D S S+ 0 0 93 1,-0.1 2,-0.1 70,-0.0 -4,-0.0 0.243 108.1 77.1-175.3 -23.3 -13.1 11.7 -0.4 23 325 A T S S- 0 0 11 50,-0.1 -4,-2.9 -5,-0.0 -3,-0.5 -0.164 76.5-110.7 -92.0-172.0 -10.7 9.0 -1.4 24 326 A V E -CD 18 72B 1 48,-2.1 48,-3.1 -6,-0.3 2,-0.3 -0.956 26.4-168.8-129.7 148.3 -8.9 6.5 0.9 25 327 A V E -CD 17 71B 15 -8,-3.9 -8,-3.7 -2,-0.3 2,-0.3 -0.889 4.8-164.7-130.5 158.1 -5.2 6.1 1.8 26 328 A M E - D 0 70B 1 44,-1.7 44,-2.6 -2,-0.3 2,-0.4 -0.949 10.8-143.6-136.8 163.5 -3.0 3.6 3.6 27 329 A E E -CD 14 69B 41 -13,-2.9 -13,-2.6 -2,-0.3 -14,-2.2 -0.993 16.5-178.2-130.3 135.1 0.5 3.8 5.0 28 330 A V E -CD 12 68B 0 40,-1.0 39,-2.0 -2,-0.4 40,-0.7 -0.977 13.8-147.8-133.8 146.2 3.2 1.1 5.0 29 331 A G E -C 11 0B 12 -18,-1.9 -18,-1.2 -2,-0.3 37,-0.2 -0.899 19.1-129.1-114.1 145.8 6.7 0.8 6.3 30 332 A F - 0 0 67 33,-0.4 -20,-0.2 -2,-0.4 4,-0.1 -0.230 9.5-159.4 -89.8 178.3 9.5 -1.1 4.8 31 333 A S S S- 0 0 73 2,-0.1 -21,-0.1 -2,-0.1 -1,-0.1 -0.021 75.6 -26.3-149.3 28.5 11.9 -3.7 6.2 32 334 A G S S+ 0 0 49 1,-0.4 -2,-0.1 -23,-0.1 -27,-0.0 -0.327 97.3 93.8 165.6 -70.5 14.9 -3.8 3.9 33 335 A T - 0 0 5 -32,-0.1 -1,-0.4 1,-0.1 3,-0.3 -0.207 66.5-125.2 -58.6 136.4 14.7 -2.9 0.3 34 336 A R S S- 0 0 166 1,-0.2 -31,-0.4 -4,-0.1 28,-0.2 -0.313 78.1 -21.3 -70.2 170.4 15.5 0.7 -0.8 35 337 A P S S+ 0 0 39 0, 0.0 2,-0.3 0, 0.0 -1,-0.2 0.314 89.0 179.0 -25.9 97.1 12.7 2.6 -2.8 36 338 A a E - B 0 62A 0 26,-0.9 26,-1.7 -3,-0.3 2,-0.9 -0.759 37.5-111.3-113.5 152.8 10.9 -0.4 -4.1 37 339 A R E -aB 4 61A 130 -34,-1.6 -32,-1.5 -2,-0.3 24,-0.2 -0.728 37.7-151.8 -82.4 105.4 7.8 -0.9 -6.2 38 340 A I - 0 0 10 22,-1.8 2,-1.7 -2,-0.9 -32,-0.1 -0.684 15.2-124.7 -87.3 131.4 5.3 -2.3 -3.8 39 341 A P + 0 0 52 0, 0.0 45,-2.4 0, 0.0 2,-0.5 -0.521 40.6 177.8 -74.4 84.3 2.6 -4.6 -5.3 40 342 A V E +E 83 0C 25 -2,-1.7 2,-0.2 43,-0.2 43,-0.2 -0.772 11.3 144.5 -96.7 129.5 -0.6 -2.8 -4.1 41 343 A R E -E 82 0C 131 41,-1.2 41,-2.5 -2,-0.5 2,-0.3 -0.778 30.0-139.0-140.2-172.4 -4.0 -4.0 -5.0 42 344 A A E -E 81 0C 1 39,-0.3 10,-1.5 -2,-0.2 11,-0.8 -0.972 7.9-163.5-159.4 143.4 -7.4 -4.1 -3.3 43 345 A V E -E 80 0C 12 37,-2.5 37,-2.9 -2,-0.3 2,-0.6 -0.722 32.8-101.5-119.7 171.3 -10.3 -6.4 -2.9 44 346 A A E > S-EF 79 47C 8 3,-2.5 3,-2.3 -2,-0.2 35,-0.2 -0.872 90.5 -30.2-103.1 116.4 -13.9 -5.9 -1.7 45 347 A H T 3 S- 0 0 75 33,-1.2 -1,-0.2 -2,-0.6 34,-0.1 0.904 124.8 -47.4 40.1 60.1 -14.5 -7.0 1.9 46 348 A G T 3 S+ 0 0 57 -3,-0.2 -1,-0.3 1,-0.2 33,-0.1 0.499 118.7 116.2 66.9 3.9 -11.9 -9.7 1.8 47 349 A V B X -F 44 0C 57 -3,-2.3 -3,-2.5 3,-0.1 2,-1.9 -0.914 59.7-151.7-112.3 118.9 -13.3 -10.9 -1.6 48 350 A P T 3 + 0 0 109 0, 0.0 3,-0.2 0, 0.0 -5,-0.1 -0.339 60.7 122.3 -76.7 55.3 -11.3 -10.7 -4.8 49 351 A E T 3 S+ 0 0 121 -2,-1.9 2,-0.3 1,-0.4 -6,-0.1 0.826 85.7 0.4 -86.1 -35.8 -14.5 -10.3 -6.8 50 352 A V S < S- 0 0 73 -3,-0.7 2,-0.6 -6,-0.0 -1,-0.4 -0.929 80.3-112.2-155.7 122.9 -13.4 -7.0 -8.3 51 353 A N - 0 0 95 -2,-0.3 -8,-0.2 -3,-0.2 28,-0.0 -0.473 29.7-173.0 -53.2 107.8 -10.1 -5.2 -7.7 52 354 A V + 0 0 1 -10,-1.5 2,-1.9 -2,-0.6 21,-0.5 0.353 48.6 116.6 -88.6 5.2 -11.3 -2.1 -5.8 53 355 A A + 0 0 14 -11,-0.8 2,-1.0 19,-0.1 21,-0.1 -0.556 28.4 160.3 -79.8 82.7 -7.8 -0.6 -6.1 54 356 A M - 0 0 101 -2,-1.9 2,-0.4 19,-1.3 19,-0.3 -0.850 37.0-145.4 -97.6 90.4 -8.5 2.4 -8.2 55 357 A L - 0 0 41 -2,-1.0 17,-0.3 17,-0.2 -2,-0.1 -0.467 27.2-170.5 -75.9 117.0 -5.3 4.1 -7.1 56 358 A I S S+ 0 0 76 -2,-0.4 16,-0.2 15,-0.3 -1,-0.2 0.722 99.9 35.7 -68.9 -22.1 -5.5 7.8 -6.7 57 359 A T S S- 0 0 38 14,-1.5 2,-0.9 -3,-0.0 -1,-0.3 -0.784 78.7-177.8-131.4 85.4 -1.8 7.4 -6.3 58 360 A P + 0 0 103 0, 0.0 12,-0.1 0, 0.0 14,-0.0 -0.132 66.7 58.8 -87.3 41.7 -0.8 4.5 -8.7 59 361 A N + 0 0 111 -2,-0.9 2,-0.6 2,-0.0 -22,-0.0 -0.354 60.7 174.5-165.6 73.5 2.9 4.4 -7.9 60 362 A P - 0 0 13 0, 0.0 -22,-1.8 0, 0.0 2,-0.4 -0.774 6.6-177.3 -87.7 120.2 3.8 3.7 -4.2 61 363 A T E -B 37 0A 36 -2,-0.6 2,-0.8 6,-0.3 -24,-0.2 -0.942 25.1-127.5-115.2 140.7 7.5 3.2 -3.6 62 364 A M E +B 36 0A 0 -26,-1.7 -26,-0.9 -2,-0.4 5,-0.3 -0.793 37.7 168.5 -95.0 113.6 8.9 2.4 -0.2 63 365 A E B > -H 66 0D 92 3,-3.1 3,-2.7 -2,-0.8 -33,-0.4 -0.193 59.2 -59.2-104.2-165.8 11.6 4.8 0.8 64 366 A N T 3 S+ 0 0 138 1,-0.3 3,-0.1 -2,-0.1 -2,-0.1 0.671 141.5 44.2 -55.2 -17.7 13.4 5.4 4.1 65 367 A N T 3 S- 0 0 75 1,-0.5 3,-0.3 -36,-0.1 -1,-0.3 0.368 122.3-108.8-105.1 2.5 10.0 6.2 5.7 66 368 A G B < -H 63 0D 0 -3,-2.7 -3,-3.1 -37,-0.2 -1,-0.5 -0.665 65.9 -33.7 98.0-158.6 8.3 3.3 4.0 67 369 A G S S- 0 0 8 -39,-2.0 -6,-0.3 -5,-0.3 2,-0.3 0.513 77.0-149.3 -76.9 -1.8 5.8 3.5 1.2 68 370 A G E -D 28 0B 13 -40,-0.7 -40,-1.0 -3,-0.3 2,-0.4 -0.539 54.5 -18.3 66.0-129.6 4.5 6.7 2.5 69 371 A F E -D 27 0B 127 -2,-0.3 2,-0.4 -42,-0.2 -42,-0.2 -0.872 57.1-160.0-115.6 142.0 0.8 7.0 1.6 70 372 A I E -D 26 0B 1 -44,-2.6 -44,-1.7 -2,-0.4 2,-0.4 -0.978 10.1-147.6-120.1 130.9 -1.1 5.1 -1.0 71 373 A E E +D 25 0B 42 -2,-0.4 -14,-1.5 -14,-0.3 -15,-0.3 -0.832 26.8 156.6-103.9 136.0 -4.4 6.4 -2.4 72 374 A M E +D 24 0B 0 -48,-3.1 -48,-2.1 -2,-0.4 2,-0.3 -0.946 5.9 159.4-147.5 159.3 -7.1 4.0 -3.5 73 375 A Q + 0 0 25 -21,-0.5 -19,-1.3 -2,-0.3 -50,-0.1 -0.973 13.7 178.9-172.9 167.1 -10.9 4.0 -4.0 74 376 A L - 0 0 36 -2,-0.3 3,-0.2 -21,-0.1 5,-0.1 -0.910 55.5 -57.8-164.8 156.9 -14.0 2.6 -5.6 75 377 A P S S- 0 0 89 0, 0.0 17,-0.1 0, 0.0 -2,-0.0 -0.112 88.4 -61.4 -37.1 138.2 -17.8 3.4 -5.4 76 378 A P S S+ 0 0 93 0, 0.0 2,-0.3 0, 0.0 17,-0.2 0.195 98.0 79.2 -34.9 136.4 -19.1 3.1 -1.8 77 379 A G E S- G 0 92C 20 15,-2.2 15,-2.2 -3,-0.2 2,-0.7 -0.969 89.7 -31.2 157.2-150.9 -18.7 -0.3 -0.1 78 380 A D E - G 0 91C 43 -2,-0.3 -33,-1.2 13,-0.2 2,-0.6 -0.874 54.5-179.1-108.1 105.6 -15.9 -2.3 1.5 79 381 A N E +EG 44 90C 3 11,-2.4 11,-1.3 -2,-0.7 2,-0.4 -0.904 0.9 179.3-105.0 125.1 -12.5 -1.6 0.1 80 382 A I E -EG 43 89C 4 -37,-2.9 -37,-2.5 -2,-0.6 2,-0.4 -0.989 21.4-135.4-123.4 132.5 -9.5 -3.5 1.5 81 383 A I E -EG 42 88C 2 7,-1.4 7,-0.9 -2,-0.4 2,-0.6 -0.695 9.6-160.1 -91.5 135.7 -6.0 -3.0 0.3 82 384 A Y E -EG 41 87C 65 -41,-2.5 2,-1.3 -2,-0.4 -41,-1.2 -0.862 5.0-172.0-115.5 91.9 -3.8 -6.0 -0.4 83 385 A V E > -EG 40 86C 0 3,-0.7 3,-2.8 -2,-0.6 2,-1.3 -0.716 69.7 -63.4 -83.8 92.6 -0.2 -4.9 -0.4 84 386 A G T 3 S- 0 0 17 -45,-2.4 -77,-0.1 -2,-1.3 -76,-0.1 -0.481 124.8 -13.7 63.6 -93.6 1.4 -8.1 -1.6 85 387 A D T 3 S+ 0 0 94 -2,-1.3 -1,-0.3 -78,-0.6 -77,-0.1 0.535 116.7 105.1-110.6 -15.7 0.4 -10.2 1.4 86 388 A L E < +G 83 0C 6 -3,-2.8 -3,-0.7 -79,-0.2 2,-0.3 -0.391 49.2 174.8 -63.3 140.0 -0.6 -7.2 3.6 87 389 A N E +G 82 0C 67 -5,-0.2 2,-0.2 -2,-0.1 -5,-0.2 -0.996 16.4 158.3-149.4 148.1 -4.4 -6.8 3.9 88 390 A H E -G 81 0C 89 -7,-0.9 -7,-1.4 -2,-0.3 2,-0.1 -0.712 29.0-132.6-171.8 122.2 -6.8 -4.6 5.8 89 391 A Q E -G 80 0C 97 -9,-0.3 2,-0.3 -2,-0.2 -9,-0.3 -0.429 19.6-175.6 -76.8 148.9 -10.5 -3.8 5.1 90 392 A W E -G 79 0C 77 -11,-1.3 -11,-2.4 -2,-0.1 2,-0.8 -0.971 22.2-136.6-143.5 129.5 -12.0 -0.3 5.2 91 393 A F E -G 78 0C 123 -2,-0.3 2,-0.5 -13,-0.2 -13,-0.2 -0.781 22.4-163.5 -86.3 112.2 -15.6 0.6 4.8 92 394 A Q E G 77 0C 7 -15,-2.2 -15,-2.2 -2,-0.8 -68,-0.1 -0.864 360.0 360.0-102.2 126.5 -15.7 3.7 2.5 93 395 A K 0 0 191 -2,-0.5 -15,-0.0 -17,-0.2 -2,-0.0 -0.789 360.0 360.0 -98.7 360.0 -19.0 5.5 2.6