==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER BLOOD COAGULATION 09-SEP-95 1ZAQ . COMPND 2 MOLECULE: THROMBOMODULIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR D.P.MEININGER,E.A.KOMIVES . 44 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3809.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 12 27.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A E 0 0 184 0, 0.0 3,-0.2 0, 0.0 5,-0.0 0.000 360.0 360.0 360.0 151.5 -2.2 -15.7 -1.5 2 2 A P + 0 0 126 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.029 360.0 47.3 -89.9 29.4 -1.6 -17.5 -4.7 3 3 A V S S- 0 0 100 1,-0.4 0, 0.0 2,-0.1 0, 0.0 -0.430 122.7 -43.0-167.6 84.0 -3.6 -14.8 -6.6 4 4 A D - 0 0 89 -3,-0.2 -1,-0.4 2,-0.1 8,-0.1 0.541 66.0-100.9 61.6 137.0 -3.0 -11.1 -6.0 5 5 A P S S- 0 0 33 0, 0.0 10,-0.1 0, 0.0 -2,-0.1 0.983 108.5 -9.1 -52.9 -76.9 -2.6 -9.9 -2.4 6 6 A a S S- 0 0 25 8,-0.2 -2,-0.1 -5,-0.0 9,-0.1 0.593 87.3-147.9-100.1 -13.1 -6.1 -8.5 -1.8 7 7 A F S S+ 0 0 146 1,-0.1 -3,-0.0 4,-0.1 0, 0.0 0.909 74.9 63.6 43.9 90.7 -7.3 -8.8 -5.4 8 8 A R S S+ 0 0 221 3,-0.0 -1,-0.1 16,-0.0 16,-0.0 -0.237 103.8 31.4 164.4 -63.7 -9.6 -5.8 -5.7 9 9 A A S S- 0 0 9 30,-0.0 14,-0.1 0, 0.0 -2,-0.0 0.057 111.8-103.1-107.5 25.6 -7.9 -2.4 -5.2 10 10 A N + 0 0 115 1,-0.1 2,-0.2 2,-0.0 -6,-0.0 0.878 56.6 173.7 54.9 102.8 -4.6 -3.6 -6.7 11 11 A b - 0 0 19 2,-0.1 4,-0.1 1,-0.0 16,-0.1 -0.739 34.2-153.7-130.9-179.3 -2.2 -4.2 -3.8 12 12 A E S S- 0 0 127 14,-0.5 3,-0.1 2,-0.3 15,-0.0 0.182 81.6 -9.8-143.5 18.1 1.4 -5.6 -3.3 13 13 A Y S S+ 0 0 130 1,-0.5 15,-0.1 15,-0.1 14,-0.1 -0.249 114.2 9.6-174.0 -91.0 1.4 -7.0 0.3 14 14 A Q - 0 0 112 13,-0.3 12,-1.2 25,-0.1 -1,-0.5 -0.330 65.3-118.8-102.2-171.7 -1.3 -6.4 3.0 15 15 A a + 0 0 45 10,-0.3 9,-0.1 9,-0.1 12,-0.0 -0.993 24.5 175.2-133.2 134.7 -4.8 -5.0 2.8 16 16 A Q - 0 0 87 -2,-0.4 8,-1.1 10,-0.0 3,-0.2 -0.687 32.1-132.8-141.2 86.4 -6.1 -1.9 4.6 17 17 A P S S- 0 0 90 0, 0.0 3,-0.2 0, 0.0 -2,-0.0 -0.086 94.2 -6.6 -39.1 103.6 -9.7 -0.9 3.7 18 18 A L S S- 0 0 130 1,-0.2 2,-2.1 3,-0.0 5,-0.1 0.990 80.0-150.2 66.7 76.0 -9.2 2.8 3.1 19 19 A N - 0 0 29 -3,-0.2 2,-2.0 6,-0.1 -1,-0.2 -0.504 56.3 -74.9 -79.0 79.5 -5.6 3.3 4.3 20 20 A Q S S+ 0 0 189 -2,-2.1 -1,-0.1 -3,-0.2 0, 0.0 -0.420 125.9 4.9 67.1 -86.0 -5.9 6.9 5.5 21 21 A T S S+ 0 0 123 -2,-2.0 -1,-0.2 2,-0.0 2,-0.1 -0.331 125.7 63.8-124.4 51.9 -6.0 8.5 2.0 22 22 A S S S- 0 0 29 -6,-0.1 3,-0.1 15,-0.1 -2,-0.1 -0.427 81.0-107.4-142.1-141.7 -6.0 5.4 -0.2 23 23 A Y S S- 0 0 113 1,-0.6 3,-0.0 2,-0.2 -2,-0.0 -0.299 71.1 -52.7-163.5 68.6 -8.3 2.4 -1.0 24 24 A L S S+ 0 0 14 -8,-1.1 -1,-0.6 1,-0.1 -9,-0.1 0.175 94.5 89.8 74.7 155.5 -7.0 -0.9 0.4 25 25 A b - 0 0 0 -3,-0.1 -10,-0.3 -14,-0.1 -2,-0.2 0.760 52.5-161.2 86.6 104.5 -3.5 -2.3 -0.3 26 26 A V - 0 0 36 -12,-1.2 -14,-0.5 1,-0.2 -13,-0.1 -0.209 23.9-107.3-100.5-163.6 -0.7 -1.3 2.1 27 27 A c - 0 0 5 1,-0.2 -13,-0.3 -14,-0.1 2,-0.3 0.835 44.7-120.7 -92.6 -86.3 3.1 -1.3 1.6 28 28 A A - 0 0 33 3,-0.4 -1,-0.2 1,-0.2 3,-0.2 -0.903 36.5 -63.7 173.8-143.9 4.8 -4.1 3.6 29 29 A E S S+ 0 0 167 -2,-0.3 2,-1.1 1,-0.2 -1,-0.2 0.863 124.5 24.9 -99.0 -65.5 7.4 -4.4 6.3 30 30 A G S S+ 0 0 34 -3,-0.1 14,-0.5 2,-0.1 2,-0.3 -0.507 103.3 98.8 -98.3 66.9 10.7 -3.1 4.8 31 31 A F - 0 0 76 -2,-1.1 -3,-0.4 12,-0.2 -4,-0.1 -0.907 62.4-142.8-154.1 122.3 9.1 -0.8 2.2 32 32 A A - 0 0 36 -2,-0.3 10,-1.0 -5,-0.1 2,-0.6 -0.763 24.1-132.2 -89.4 114.4 8.5 2.9 2.3 33 33 A P - 0 0 62 0, 0.0 8,-0.2 0, 0.0 4,-0.2 -0.496 31.4-112.2 -66.8 113.4 5.2 3.7 0.6 34 34 A I > - 0 0 27 -2,-0.6 3,-1.5 6,-0.4 6,-0.2 -0.011 24.4-114.4 -41.7 151.6 6.0 6.7 -1.8 35 35 A P T 3 S+ 0 0 135 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.906 117.8 47.2 -60.7 -42.6 4.3 9.9 -0.7 36 36 A H T 3 S+ 0 0 130 1,-0.2 -2,-0.1 2,-0.1 0, 0.0 0.097 124.0 32.6 -87.8 27.5 2.1 9.9 -3.8 37 37 A E < + 0 0 57 -3,-1.5 -1,-0.2 -4,-0.2 -15,-0.1 -0.654 49.9 176.4 179.6 119.8 1.2 6.3 -3.3 38 38 A P S S+ 0 0 26 0, 0.0 -4,-0.1 0, 0.0 -16,-0.1 0.816 85.1 58.3 -98.6 -40.5 0.8 4.1 -0.2 39 39 A H S S+ 0 0 26 -15,-0.1 2,-0.3 -6,-0.1 -27,-0.2 0.734 108.8 58.5 -62.7 -16.8 -0.3 0.8 -1.7 40 40 A R S S- 0 0 135 -6,-0.2 -6,-0.4 -15,-0.1 2,-0.3 -0.763 71.3-170.2-110.8 158.8 3.0 0.9 -3.7 41 41 A c - 0 0 29 -2,-0.3 -10,-0.0 -8,-0.2 -2,-0.0 -0.852 25.6-151.4-139.5 176.7 6.5 1.1 -2.2 42 42 A Q - 0 0 152 -10,-1.0 -11,-0.1 -2,-0.3 -1,-0.0 0.089 55.5 -99.4-138.4 22.5 10.1 1.7 -3.3 43 43 A M 0 0 132 -11,-0.1 -12,-0.2 0, 0.0 -13,-0.0 0.699 360.0 360.0 61.5 122.9 12.0 -0.3 -0.7 44 44 A F 0 0 226 -14,-0.5 -14,-0.0 0, 0.0 -3,-0.0 -0.278 360.0 360.0 -56.8 360.0 13.5 1.7 2.1