==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-OCT-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 18-APR-05 1ZE7 . COMPND 2 MOLECULE: 16-MER FROM ALZHEIMER'S DISEASE AMYLOID PROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR S.ZIRAH,S.A.KOZIN,A.K.MAZUR,A.BLOND,M.CHEMINANT,I.SEGALAS-MI . 16 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1978.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 4 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 134 0, 0.0 3,-0.3 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -13.3 0.8 -6.3 -5.3 2 2 A A > + 0 0 66 1,-0.2 3,-0.8 2,-0.2 0, 0.0 0.872 360.0 47.8 -73.1 -39.3 -2.7 -7.8 -5.4 3 3 A E T 3 S+ 0 0 179 1,-0.3 -1,-0.2 2,-0.0 0, 0.0 0.418 120.6 41.7 -79.7 1.2 -1.3 -11.2 -4.5 4 4 A F T 3 S- 0 0 141 -3,-0.3 -1,-0.3 0, 0.0 -2,-0.2 -0.287 79.2-179.1-143.9 51.3 0.5 -9.4 -1.7 5 5 A R < + 0 0 131 -3,-0.8 -3,-0.1 1,-0.2 -2,-0.0 -0.343 19.5 149.9 -58.5 127.5 -1.9 -6.9 -0.3 6 6 A H > + 0 0 117 -5,-0.1 3,-2.0 -2,-0.1 -1,-0.2 0.132 35.0 111.5-144.2 14.9 -0.3 -4.9 2.5 7 7 A D G > + 0 0 50 1,-0.3 3,-1.6 2,-0.1 -2,-0.1 0.666 62.7 81.0 -67.7 -16.0 -2.2 -1.6 2.2 8 8 A S G 3 S+ 0 0 128 1,-0.3 -1,-0.3 3,-0.0 -3,-0.0 0.719 102.4 35.8 -60.5 -21.0 -3.7 -2.6 5.5 9 9 A G G < S+ 0 0 74 -3,-2.0 2,-0.4 2,-0.1 -1,-0.3 -0.342 97.0 108.7-128.2 50.6 -0.5 -1.2 6.9 10 10 A Y < - 0 0 87 -3,-1.6 2,-0.3 3,-0.0 -3,-0.0 -0.994 53.4-146.5-134.1 128.1 0.2 1.7 4.6 11 11 A E > - 0 0 121 -2,-0.4 3,-1.2 1,-0.1 -2,-0.1 -0.657 23.0-125.1 -93.5 149.4 0.0 5.4 5.3 12 12 A V T 3 S+ 0 0 121 -2,-0.3 4,-0.1 1,-0.3 -1,-0.1 0.247 92.7 96.6 -78.1 15.1 -1.0 7.9 2.7 13 13 A H T 3 S+ 0 0 157 2,-0.1 2,-0.4 1,-0.1 -1,-0.3 0.878 79.5 55.6 -68.9 -39.5 2.2 9.7 3.4 14 14 A H S < S- 0 0 135 -3,-1.2 2,-0.1 1,-0.0 -1,-0.1 -0.820 98.4-109.2-100.0 134.4 3.9 7.9 0.5 15 15 A Q 0 0 174 -2,-0.4 -2,-0.1 1,-0.1 -1,-0.0 -0.364 360.0 360.0 -62.2 133.8 2.4 8.2 -3.0 16 16 A K 0 0 163 -4,-0.1 -1,-0.1 -2,-0.1 -4,-0.0 -0.437 360.0 360.0 -83.5 360.0 0.9 5.0 -4.2