==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-OCT-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 18-APR-05 1ZE9 . COMPND 2 MOLECULE: 16-MER FROM ALZHEIMER'S DISEASE AMYLOID PROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR S.ZIRAH,S.A.KOZIN,A.K.MAZUR,A.BLOND,M.CHEMINANT,I.SEGALAS-MI . 16 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1633.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 4 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 18.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 130 0, 0.0 6,-0.1 0, 0.0 5,-0.0 0.000 360.0 360.0 360.0 -15.6 -9.0 9.4 -5.7 2 2 A A + 0 0 113 1,-0.2 3,-0.2 2,-0.1 0, 0.0 0.933 360.0 5.1 -50.0 -53.4 -11.5 7.0 -7.2 3 3 A E S S+ 0 0 99 1,-0.2 2,-1.5 2,-0.0 3,-0.2 0.780 128.0 65.2-100.0 -38.0 -9.7 4.0 -5.7 4 4 A F + 0 0 70 1,-0.2 3,-0.3 2,-0.1 -1,-0.2 -0.546 53.1 127.6 -93.6 70.1 -7.0 5.8 -3.7 5 5 A R + 0 0 113 -2,-1.5 3,-0.3 -3,-0.2 -1,-0.2 0.311 66.3 69.0 -99.0 3.9 -9.1 7.6 -1.1 6 6 A H > + 0 0 83 -3,-0.2 3,-1.6 1,-0.2 -1,-0.2 -0.215 56.8 125.0-111.3 39.2 -6.9 6.1 1.6 7 7 A D T 3 S+ 0 0 93 -3,-0.3 3,-0.4 1,-0.3 -1,-0.2 0.749 74.2 54.9 -69.1 -24.0 -3.9 8.1 0.7 8 8 A S T 3 S+ 0 0 121 1,-0.3 -1,-0.3 -3,-0.3 -2,-0.1 0.143 124.0 24.2 -94.0 17.7 -3.8 9.3 4.3 9 9 A G S < S- 0 0 39 -3,-1.6 -1,-0.3 2,-0.0 2,-0.2 -0.188 75.8-164.3 179.2 74.9 -3.7 5.7 5.4 10 10 A Y - 0 0 134 -3,-0.4 2,-0.2 1,-0.0 -3,-0.1 -0.474 17.5-178.4 -70.6 137.1 -2.3 3.1 3.0 11 11 A E > - 0 0 60 -2,-0.2 3,-0.5 1,-0.0 -2,-0.0 -0.611 40.5 -93.4-129.7-172.9 -3.2 -0.5 3.9 12 12 A V G > S+ 0 0 114 1,-0.2 3,-1.9 -2,-0.2 -2,-0.0 0.885 119.1 55.5 -75.7 -40.8 -2.6 -4.0 2.7 13 13 A H G 3 S+ 0 0 126 1,-0.3 -1,-0.2 3,-0.0 -3,-0.0 0.639 99.9 65.3 -65.7 -13.2 -5.7 -4.4 0.7 14 14 A H G < S+ 0 0 17 -3,-0.5 -1,-0.3 -8,-0.1 -2,-0.2 0.284 70.3 138.0 -97.2 8.3 -4.6 -1.3 -1.2 15 15 A Q < 0 0 143 -3,-1.9 -3,-0.1 -5,-0.0 0, 0.0 -0.342 360.0 360.0 -57.4 129.5 -1.6 -3.0 -2.6 16 16 A K 0 0 178 -2,-0.1 -2,-0.1 0, 0.0 -3,-0.0 -0.986 360.0 360.0-154.6 360.0 -1.2 -2.0 -6.3