==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ZINC FINGER DNA BINDING DOMAIN 04-APR-96 1ZFD . COMPND 2 MOLECULE: SWI5; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR D.NEUHAUS,Y.NAKASEKO,J.W.R.SCHWABE,D.RHODES,A.KLUG . 32 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3107.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 15 46.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 6.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 15.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 21.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 39 A D 0 0 174 0, 0.0 4,-0.1 0, 0.0 15,-0.0 0.000 360.0 360.0 360.0 40.6 -9.2 -13.4 -9.2 2 40 A R - 0 0 168 1,-0.1 3,-0.3 2,-0.1 14,-0.1 0.967 360.0-167.3 49.5 65.6 -8.8 -10.3 -6.9 3 41 A P S S+ 0 0 81 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 0.620 82.0 53.5 -58.7 -10.0 -12.4 -9.2 -7.3 4 42 A Y B +A 15 0A 74 11,-1.0 11,-0.8 2,-0.1 2,-0.7 -0.680 63.1 150.2-128.9 79.3 -11.2 -5.9 -5.7 5 43 A S - 0 0 80 -2,-0.4 9,-0.1 -3,-0.3 11,-0.0 -0.663 33.5-153.5-110.4 76.3 -8.2 -4.6 -7.6 6 44 A C - 0 0 29 -2,-0.7 7,-0.1 7,-0.3 -2,-0.1 -0.061 4.9-160.4 -45.1 148.6 -8.4 -0.8 -7.1 7 45 A D + 0 0 151 5,-0.1 -1,-0.1 2,-0.0 3,-0.0 -0.280 30.8 148.3-131.3 49.4 -6.7 1.1 -9.9 8 46 A H > - 0 0 73 1,-0.1 3,-1.8 2,-0.0 2,-0.1 -0.646 59.5 -94.9 -85.6 141.8 -6.0 4.6 -8.5 9 47 A P T 3 S+ 0 0 111 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 -0.320 114.6 19.5 -56.2 124.8 -2.9 6.5 -9.8 10 48 A G T 3 S+ 0 0 82 1,-0.3 2,-0.2 -2,-0.1 -2,-0.0 0.622 97.5 136.9 89.4 13.8 -0.0 5.8 -7.3 11 49 A C < + 0 0 35 -3,-1.8 -1,-0.3 1,-0.1 3,-0.1 -0.507 23.4 163.1 -91.4 162.6 -1.7 2.7 -5.9 12 50 A D + 0 0 135 -2,-0.2 2,-0.4 1,-0.1 -1,-0.1 0.075 41.9 98.9-170.0 40.3 -0.0 -0.6 -5.1 13 51 A K - 0 0 109 -7,-0.1 -7,-0.3 2,-0.0 -1,-0.1 -0.856 49.3-160.8-140.7 104.1 -2.2 -2.7 -2.8 14 52 A A - 0 0 63 -2,-0.4 2,-0.3 -9,-0.1 -9,-0.2 -0.256 10.7-160.8 -76.3 168.6 -4.5 -5.5 -4.2 15 53 A F B -A 4 0A 36 -11,-0.8 -11,-1.0 1,-0.1 3,-0.0 -0.979 27.0-168.8-149.3 160.9 -7.4 -7.0 -2.3 16 54 A V S S+ 0 0 91 -2,-0.3 -1,-0.1 -13,-0.1 2,-0.1 0.610 74.7 63.6-120.4 -31.0 -9.7 -10.0 -2.1 17 55 A R S S- 0 0 160 -13,-0.1 4,-0.5 1,-0.1 -2,-0.0 -0.288 76.4-128.8 -88.8 178.7 -12.4 -8.8 0.2 18 56 A N S >> S+ 0 0 79 2,-0.1 4,-1.5 3,-0.1 3,-1.1 0.913 100.2 52.2 -94.1 -62.0 -14.9 -6.0 -0.3 19 57 A H H 3> S+ 0 0 105 1,-0.3 4,-3.1 2,-0.2 5,-0.4 0.865 103.4 64.1 -43.5 -40.3 -14.7 -3.8 2.8 20 58 A D H 3> S+ 0 0 37 1,-0.3 4,-2.6 2,-0.2 5,-0.3 0.941 101.2 48.4 -51.0 -50.5 -11.0 -3.7 2.3 21 59 A L H <> S+ 0 0 22 -3,-1.1 4,-2.7 -4,-0.5 -1,-0.3 0.841 112.3 51.2 -60.2 -31.1 -11.5 -1.9 -1.0 22 60 A I H X S+ 0 0 74 -4,-1.5 4,-1.5 -3,-0.3 -2,-0.2 0.931 115.4 38.9 -72.7 -44.4 -13.8 0.5 0.8 23 61 A R H < S+ 0 0 160 -4,-3.1 -2,-0.2 -5,-0.2 -1,-0.2 0.748 121.5 47.1 -76.2 -22.1 -11.4 1.3 3.6 24 62 A H H >X S+ 0 0 11 -4,-2.6 3,-1.0 -5,-0.4 4,-0.8 0.863 108.5 52.2 -86.1 -39.4 -8.6 1.3 1.1 25 63 A K H >< S+ 0 0 118 -4,-2.7 3,-1.1 -5,-0.3 4,-0.2 0.922 103.3 57.4 -63.9 -42.9 -10.2 3.5 -1.5 26 64 A K G >X S+ 0 0 107 -4,-1.5 4,-1.0 1,-0.3 3,-0.6 0.651 97.2 68.2 -63.1 -10.5 -11.1 6.2 1.0 27 65 A S G <4 S+ 0 0 46 -3,-1.0 -1,-0.3 1,-0.2 -2,-0.2 0.868 82.3 68.1 -77.1 -36.4 -7.4 6.3 1.7 28 66 A H G << S+ 0 0 57 -3,-1.1 -1,-0.2 -4,-0.8 -2,-0.2 0.593 101.8 55.1 -59.6 -5.1 -6.5 7.7 -1.7 29 67 A Q T <4 S+ 0 0 154 -3,-0.6 -2,-0.2 -4,-0.2 -1,-0.2 0.921 72.5 155.5 -91.1 -70.4 -8.3 10.8 -0.4 30 68 A E < - 0 0 136 -4,-1.0 -3,-0.0 2,-0.1 -2,-0.0 0.387 46.5 -92.3 55.3 156.8 -6.6 11.8 2.9 31 69 A K 0 0 181 1,-0.2 0, 0.0 0, 0.0 0, 0.0 -0.032 360.0 360.0 -86.8-164.3 -6.8 15.4 4.2 32 70 A A 0 0 168 -2,-0.0 -1,-0.2 0, 0.0 -2,-0.1 0.605 360.0 360.0 53.5 360.0 -4.4 18.3 3.6