==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 13-MAY-05 1ZOK . COMPND 2 MOLECULE: PRESYNAPTIC PROTEIN SAP97; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR L.WANG,A.PISERCHIO,D.F.MIERKE . 93 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6912.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 46.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 18.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 221 A E 0 0 162 0, 0.0 88,-3.3 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 127.3 149.6 -7.2 10.4 2 222 A Y B -A 88 0A 141 86,-0.3 2,-0.4 2,-0.0 86,-0.3 -0.974 360.0-175.3-129.3 141.9 148.1 -6.8 7.0 3 223 A E - 0 0 136 84,-2.1 84,-0.4 -2,-0.4 2,-0.3 -0.947 12.5-150.9-141.1 117.0 145.5 -8.8 5.1 4 224 A E - 0 0 76 -2,-0.4 2,-0.5 82,-0.2 82,-0.2 -0.658 6.7-155.5 -88.7 139.8 144.3 -8.2 1.6 5 225 A I E -B 85 0B 47 80,-2.6 80,-2.4 -2,-0.3 2,-0.8 -0.954 4.5-166.7-120.5 113.9 140.8 -9.1 0.5 6 226 A T E +B 84 0B 56 -2,-0.5 78,-0.3 78,-0.3 2,-0.3 -0.842 20.7 171.8-103.4 99.2 140.2 -9.8 -3.2 7 227 A L E -B 83 0B 5 76,-2.9 76,-4.5 -2,-0.8 2,-0.1 -0.695 29.1-106.0-108.0 160.5 136.4 -9.8 -3.8 8 228 A E - 0 0 109 74,-0.3 74,-0.2 -2,-0.3 39,-0.1 -0.361 36.2 -96.6 -82.4 161.0 134.3 -10.0 -6.9 9 229 A R - 0 0 118 1,-0.1 -1,-0.1 -2,-0.1 72,-0.1 -0.129 31.4-156.7 -69.6 167.2 132.3 -7.3 -8.5 10 230 A G - 0 0 15 67,-0.1 -1,-0.1 33,-0.1 32,-0.0 0.397 16.0-130.5-112.8-113.4 128.6 -6.8 -8.0 11 231 A N S S- 0 0 126 0, 0.0 3,-0.0 0, 0.0 -1,-0.0 0.107 91.5 -2.7 179.7 -38.3 126.1 -5.1 -10.3 12 232 A S S S+ 0 0 100 0, 0.0 65,-0.0 0, 0.0 3,-0.0 0.049 138.3 4.7-161.9 31.0 124.1 -2.6 -8.2 13 233 A G - 0 0 47 64,-0.0 30,-0.3 4,-0.0 31,-0.1 0.254 53.1-156.1 143.4 84.9 125.4 -3.0 -4.7 14 234 A L - 0 0 16 28,-0.2 30,-2.6 2,-0.2 31,-0.6 0.840 56.2-103.2 -46.1 -39.6 128.3 -5.3 -3.7 15 235 A G S S+ 0 0 12 1,-0.5 24,-1.8 27,-0.2 2,-0.3 0.105 91.6 88.4 136.1 -23.2 126.9 -5.4 -0.2 16 236 A F E -E 38 0C 30 22,-0.3 -1,-0.5 35,-0.0 22,-0.3 -0.830 59.8-146.6-109.3 146.9 129.1 -3.1 1.8 17 237 A S E -E 37 0C 38 20,-4.1 19,-1.2 -2,-0.3 20,-0.9 -0.742 8.6-158.6-110.7 158.9 128.7 0.6 2.2 18 238 A I E -E 35 0C 32 -2,-0.3 2,-0.4 17,-0.3 17,-0.3 -0.966 5.6-146.0-136.5 152.2 131.3 3.4 2.6 19 239 A A E +E 34 0C 25 15,-3.1 15,-1.2 -2,-0.3 2,-0.3 -0.933 24.8 159.0-120.5 142.5 131.4 6.9 4.0 20 240 A G + 0 0 13 -2,-0.4 49,-0.1 13,-0.2 13,-0.1 -0.986 20.1 175.6-156.2 163.3 133.3 9.9 2.7 21 241 A G + 0 0 17 -2,-0.3 9,-0.1 10,-0.3 11,-0.1 -0.232 28.1 134.8-173.5 73.8 133.6 13.6 2.8 22 242 A T S S- 0 0 13 9,-0.1 6,-0.6 7,-0.1 46,-0.1 0.901 96.4 -31.4 -89.8 -52.1 136.5 15.4 1.1 23 243 A D S S+ 0 0 115 4,-0.2 4,-0.2 8,-0.1 45,-0.1 0.206 125.7 75.3-154.1 13.5 134.7 18.1 -0.8 24 244 A N S S+ 0 0 96 2,-0.3 3,-0.1 3,-0.0 -3,-0.1 0.896 110.2 16.9 -95.6 -58.8 131.3 16.7 -1.7 25 245 A P S S- 0 0 67 0, 0.0 2,-0.3 0, 0.0 -4,-0.1 0.863 137.7 -13.5 -83.0 -39.3 129.2 16.7 1.5 26 246 A H S S- 0 0 119 2,-0.0 -2,-0.3 0, 0.0 0, 0.0 -0.974 79.8 -84.9-163.2 149.8 131.4 19.2 3.4 27 247 A I + 0 0 147 -2,-0.3 2,-0.3 -4,-0.2 -4,-0.2 -0.127 54.8 156.3 -54.8 152.0 134.9 20.8 3.3 28 248 A G - 0 0 40 -6,-0.6 3,-0.0 1,-0.1 -2,-0.0 -0.942 46.0-140.2-175.5 153.9 137.8 18.8 4.7 29 249 A D S S+ 0 0 172 -2,-0.3 2,-0.8 1,-0.1 -1,-0.1 0.859 89.0 71.2 -88.7 -42.1 141.5 18.3 4.6 30 250 A D + 0 0 109 1,-0.2 -9,-0.2 -9,-0.1 -1,-0.1 -0.683 54.7 178.9 -81.7 109.5 141.6 14.5 4.9 31 251 A S + 0 0 19 -2,-0.8 -10,-0.3 34,-0.2 2,-0.2 0.749 47.8 111.4 -80.2 -25.7 140.3 13.1 1.6 32 252 A S - 0 0 34 33,-0.1 2,-0.2 -12,-0.1 33,-0.1 -0.320 60.8-150.7 -54.3 113.1 140.8 9.5 2.8 33 253 A I - 0 0 23 31,-0.3 23,-0.5 -2,-0.2 2,-0.3 -0.552 5.7-142.7 -88.7 153.5 137.3 8.1 3.1 34 254 A F E -E 19 0C 105 -15,-1.2 -15,-3.1 21,-0.2 21,-0.3 -0.796 17.4-105.2-116.9 160.0 136.3 5.4 5.6 35 255 A I E -E 18 0C 5 19,-1.7 -17,-0.3 -2,-0.3 3,-0.1 -0.480 25.3-173.9 -80.5 149.4 133.9 2.5 5.6 36 256 A T E - 0 0 55 -19,-1.2 2,-0.3 1,-0.3 -18,-0.2 0.774 57.9 -18.1-111.3 -49.0 130.6 2.6 7.5 37 257 A K E -E 17 0C 112 -20,-0.9 -20,-4.1 14,-0.0 2,-0.7 -0.978 45.1-130.1-164.5 150.9 129.0 -0.8 7.3 38 258 A I E -E 16 0C 29 -2,-0.3 2,-0.6 -22,-0.3 -22,-0.3 -0.895 26.1-154.5-106.9 104.4 128.9 -4.1 5.5 39 259 A I - 0 0 92 -24,-1.8 6,-0.3 -2,-0.7 5,-0.1 -0.709 15.8-130.8 -84.3 117.0 125.3 -5.0 4.5 40 260 A T S S+ 0 0 121 -2,-0.6 3,-0.1 1,-0.2 -25,-0.1 -0.361 80.0 68.2 -66.0 142.2 124.8 -8.7 4.2 41 261 A G S S+ 0 0 75 1,-0.4 2,-0.3 -27,-0.1 -1,-0.2 0.669 82.1 83.3 117.6 32.6 123.1 -9.9 1.0 42 262 A G S > S- 0 0 9 1,-0.1 4,-3.2 -27,-0.1 -1,-0.4 -0.937 91.8 -86.4-152.8 173.7 125.6 -9.2 -1.7 43 263 A A H > S+ 0 0 18 -30,-0.3 4,-2.2 -2,-0.3 5,-0.3 0.860 125.2 53.8 -52.3 -38.6 128.6 -10.4 -3.6 44 264 A A H > S+ 0 0 0 -30,-2.6 4,-2.5 2,-0.2 -1,-0.2 0.960 113.6 39.1 -61.8 -53.7 130.8 -8.8 -0.9 45 265 A A H 4 S+ 0 0 24 -31,-0.6 -2,-0.2 -6,-0.3 -1,-0.2 0.843 113.0 58.2 -65.8 -34.6 129.0 -10.6 2.0 46 266 A Q H < S+ 0 0 171 -4,-3.2 -1,-0.2 1,-0.2 -2,-0.2 0.910 117.3 31.7 -62.3 -43.5 128.8 -13.8 -0.0 47 267 A D H < S- 0 0 89 -4,-2.2 2,-0.3 -5,-0.2 -2,-0.2 0.753 129.5 -92.0 -85.1 -27.0 132.5 -13.9 -0.5 48 268 A G < + 0 0 32 -4,-2.5 -1,-0.1 -5,-0.3 -43,-0.0 -0.775 48.9 173.5 157.8-108.2 133.3 -12.3 2.9 49 269 A R - 0 0 18 -2,-0.3 -1,-0.1 -3,-0.1 2,-0.1 0.935 29.6-141.0 62.0 97.5 133.8 -8.6 3.6 50 270 A L - 0 0 113 1,-0.1 2,-0.8 -13,-0.0 -2,-0.0 -0.273 34.7 -75.2 -81.7 171.4 134.1 -8.0 7.3 51 271 A R - 0 0 208 -14,-0.1 2,-0.2 -13,-0.1 -1,-0.1 -0.570 59.8-174.8 -72.0 106.4 132.6 -5.1 9.3 52 272 A V + 0 0 34 -2,-0.8 -14,-0.1 1,-0.1 3,-0.0 -0.659 26.0 170.5-102.7 159.7 134.9 -2.2 8.5 53 273 A N + 0 0 124 -2,-0.2 2,-0.3 -16,-0.1 -1,-0.1 0.150 58.7 66.7-151.8 18.0 134.9 1.3 9.9 54 274 A D S S- 0 0 112 -20,-0.1 -19,-1.7 -21,-0.1 2,-0.2 -0.845 86.0 -80.7-137.4 173.8 138.1 2.9 8.6 55 275 A C - 0 0 33 -21,-0.3 -21,-0.2 -2,-0.3 2,-0.1 -0.538 46.1-117.3 -79.1 142.2 139.7 4.1 5.4 56 276 A I - 0 0 41 -23,-0.5 31,-0.2 -2,-0.2 3,-0.1 -0.436 8.7-137.9 -77.5 151.8 141.4 1.5 3.2 57 277 A L S S- 0 0 87 29,-1.7 2,-0.3 1,-0.3 30,-0.2 0.895 80.7 -10.1 -75.8 -42.0 145.2 1.7 2.5 58 278 A R E -C 86 0B 77 28,-1.0 28,-1.7 5,-0.1 2,-0.4 -0.992 56.7-146.5-157.1 154.9 144.8 0.9 -1.2 59 279 A V E > S-CD 85 62B 11 3,-3.6 3,-2.1 -2,-0.3 26,-0.2 -0.986 82.7 -11.6-131.1 123.8 142.3 -0.3 -3.8 60 280 A N T 3 S- 0 0 53 24,-2.8 25,-0.1 -2,-0.4 -1,-0.1 0.838 128.6 -56.7 59.0 33.5 143.1 -2.5 -6.8 61 281 A E T 3 S+ 0 0 140 23,-0.5 2,-0.4 1,-0.2 -1,-0.3 0.411 125.7 99.4 78.7 -2.1 146.8 -1.9 -6.1 62 282 A A B < S-D 59 0B 59 -3,-2.1 -3,-3.6 2,-0.0 2,-0.6 -0.949 77.5-120.1-121.2 138.6 146.1 1.9 -6.3 63 283 A D - 0 0 100 -2,-0.4 3,-0.3 -5,-0.3 -5,-0.1 -0.640 18.3-166.9 -78.3 117.6 145.6 4.3 -3.5 64 284 A V + 0 0 38 -2,-0.6 -31,-0.3 1,-0.2 3,-0.2 -0.215 54.5 115.0 -97.4 42.6 142.2 6.0 -3.8 65 285 A R + 0 0 120 1,-0.2 2,-0.2 -2,-0.1 -34,-0.2 0.365 64.5 70.3 -90.8 4.4 143.0 8.7 -1.2 66 286 A D S S+ 0 0 141 -3,-0.3 2,-0.3 -35,-0.1 -1,-0.2 -0.516 82.1 92.0-119.9 61.5 142.7 11.3 -3.9 67 287 A V - 0 0 17 -3,-0.2 2,-0.1 -2,-0.2 -45,-0.0 -0.876 61.8-126.2-142.8 176.6 139.0 11.3 -4.6 68 288 A T > - 0 0 42 -2,-0.3 4,-0.9 -46,-0.1 -47,-0.1 -0.015 48.0 -83.2-103.8-150.0 135.7 13.0 -3.6 69 289 A H H > S+ 0 0 57 2,-0.2 4,-1.5 3,-0.1 5,-0.1 0.897 129.5 38.8 -88.1 -46.0 132.5 11.3 -2.4 70 290 A S H > S+ 0 0 78 1,-0.2 4,-0.8 2,-0.2 -1,-0.1 0.686 116.9 54.2 -76.2 -18.1 131.1 10.4 -5.8 71 291 A K H > S+ 0 0 126 2,-0.2 4,-3.1 3,-0.1 -1,-0.2 0.884 105.4 51.0 -81.6 -41.3 134.6 9.5 -7.0 72 292 A A H X S+ 0 0 5 -4,-0.9 4,-1.2 2,-0.2 5,-0.2 0.901 107.9 53.1 -61.9 -42.0 135.2 7.1 -4.2 73 293 A V H X S+ 0 0 67 -4,-1.5 4,-1.6 1,-0.2 -1,-0.2 0.866 117.9 37.2 -61.3 -36.9 132.0 5.3 -4.8 74 294 A E H X S+ 0 0 112 -4,-0.8 4,-3.5 2,-0.2 -2,-0.2 0.777 103.8 70.4 -84.7 -30.4 133.0 4.9 -8.5 75 295 A A H < S+ 0 0 31 -4,-3.1 -2,-0.2 2,-0.2 -1,-0.2 0.799 113.1 30.7 -57.4 -28.2 136.6 4.3 -7.7 76 296 A L H >< S+ 0 0 36 -4,-1.2 3,-2.1 -5,-0.2 4,-0.4 0.888 121.7 47.1 -93.1 -55.7 135.6 0.9 -6.3 77 297 A K H >< S+ 0 0 61 -4,-1.6 3,-0.8 1,-0.3 -2,-0.2 0.892 118.5 43.8 -51.7 -45.5 132.6 0.1 -8.4 78 298 A E T 3< S+ 0 0 147 -4,-3.5 -1,-0.3 1,-0.2 -3,-0.1 0.328 86.2 98.6 -84.4 6.2 134.6 1.1 -11.5 79 299 A A T < S- 0 0 24 -3,-2.1 2,-0.3 1,-0.3 -1,-0.2 0.768 90.8-119.4 -64.4 -26.8 137.5 -0.8 -10.2 80 300 A G < - 0 0 30 -3,-0.8 -1,-0.3 -4,-0.4 3,-0.1 -0.780 45.4 -36.0 120.4-165.3 136.6 -3.7 -12.4 81 301 A S S S+ 0 0 84 -2,-0.3 2,-0.4 1,-0.2 -1,-0.2 0.974 123.5 31.8 -58.5 -87.1 135.6 -7.4 -11.8 82 302 A I S S- 0 0 74 -74,-0.2 2,-0.5 -3,-0.1 -74,-0.3 -0.603 75.4-159.9 -78.6 130.1 137.7 -8.5 -8.9 83 303 A V E -B 7 0B 12 -76,-4.5 -76,-2.9 -2,-0.4 2,-0.5 -0.946 2.3-162.4-115.2 126.4 138.5 -5.9 -6.4 84 304 A R E -B 6 0B 91 -2,-0.5 -24,-2.8 -78,-0.3 -23,-0.5 -0.927 4.3-169.2-112.2 126.1 141.4 -6.2 -3.9 85 305 A L E -BC 5 59B 9 -80,-2.4 -80,-2.6 -2,-0.5 2,-0.5 -0.935 7.3-153.4-115.6 133.7 141.7 -4.1 -0.8 86 306 A Y E + C 0 58B 55 -28,-1.7 -29,-1.7 -2,-0.4 -28,-1.0 -0.903 14.8 176.2-110.0 131.9 144.8 -3.9 1.4 87 307 A V - 0 0 46 -2,-0.5 -84,-2.1 -84,-0.4 2,-0.4 -0.987 6.3-170.0-137.5 125.9 144.7 -3.1 5.1 88 308 A K B -A 2 0A 145 -2,-0.4 2,-0.4 -86,-0.3 -86,-0.3 -0.920 2.0-167.9-118.0 141.7 147.6 -3.1 7.6 89 309 A R - 0 0 121 -88,-3.3 2,-0.3 -2,-0.4 -2,-0.0 -0.975 8.8-152.4-132.4 119.8 147.4 -2.8 11.4 90 310 A R - 0 0 231 -2,-0.4 2,-0.4 1,-0.0 -2,-0.0 -0.710 14.5-134.1 -92.2 139.7 150.5 -2.1 13.5 91 311 A K + 0 0 172 -2,-0.3 2,-0.2 2,-0.0 -1,-0.0 -0.761 37.9 146.2 -95.4 137.1 150.6 -3.3 17.1 92 312 A A 0 0 54 -2,-0.4 0, 0.0 1,-0.1 0, 0.0 -0.824 360.0 360.0-150.4-172.1 151.7 -1.0 19.9 93 313 A F 0 0 264 -2,-0.2 -1,-0.1 0, 0.0 -2,-0.0 0.652 360.0 360.0 44.9 360.0 151.3 -0.1 23.6