data_2197 ####################### # Entry information # ####################### save_entry_information _Saveframe_category entry_information _Entry_title ; Solution Conformation of a Synthetic Fragment of Human Pituitary Growth Hormone. Two-Dimensional NMR of an alpha-Helical Dimer ; _BMRB_accession_number 2197 _BMRB_flat_file_name bmr2197.str _Entry_type update _Submission_date 1995-07-31 _Accession_date 1996-04-13 _Entry_origination BMRB _NMR_STAR_version 2.1.1 _Experimental_method NMR _Details . loop_ _Author_ordinal _Author_family_name _Author_given_name _Author_middle_initials _Author_family_title 1 Roongta Vikram . . 2 Powers Robert . . 3 Jones Claude R. . 4 Beakage Michael J. . 5 Sheilds James E. . 6 Gorenstein David G. . stop_ loop_ _Saveframe_category_type _Saveframe_category_type_count assigned_chemical_shifts 1 stop_ loop_ _Data_type _Data_type_count "1H chemical shifts" 174 stop_ loop_ _Revision_date _Revision_keyword _Revision_author _Revision_detail 2010-06-16 revision BMRB 'Complete natural source information' 1999-06-14 revision BMRB 'Converted to BMRB NMR-STAR V 2.1 format' 1996-04-13 revision BMRB 'Link to the Protein Data Bank added' 1996-03-25 reformat BMRB 'Converted to the BMRB 1996-03-01 STAR flat-file format' 1995-07-31 original BMRB 'Last release in original BMRB flat-file format' stop_ save_ ############################# # Citation for this entry # ############################# save_entry_citation _Saveframe_category entry_citation _Citation_full ; Roongta, Vikram, Powers, Robert, Jones, Claude R., Beakage, Michael J., Sheilds, James E., Gorenstein, David G., "Solution Conformation of a Synthetic Fragment of Human Pituitary Growth Hormone. Two-Dimensional NMR of an alpha-Helical Dimer," Biochemistry 28 (3), 1048-1054 (1989). ; _Citation_title ; Solution Conformation of a Synthetic Fragment of Human Pituitary Growth Hormone. Two-Dimensional NMR of an alpha-Helical Dimer ; _Citation_status published _Citation_type journal _CAS_abstract_code . _MEDLINE_UI_code . _PubMed_ID ? loop_ _Author_ordinal _Author_family_name _Author_given_name _Author_middle_initials _Author_family_title 1 Roongta Vikram . . 2 Powers Robert . . 3 Jones Claude R. . 4 Beakage Michael J. . 5 Sheilds James E. . 6 Gorenstein David G. . stop_ _Journal_abbreviation Biochemistry _Journal_volume 28 _Journal_issue 3 _Journal_CSD . _Book_chapter_title . _Book_volume . _Book_series . _Book_ISBN . _Conference_state_province . _Conference_abstract_number . _Page_first 1048 _Page_last 1054 _Year 1989 _Details . save_ ################################## # Molecular system description # ################################## save_system_pituitary_growth_factor _Saveframe_category molecular_system _Mol_system_name 'pituitary growth factor' _Enzyme_commission_number . loop_ _Mol_system_component_name _Mol_label 'pituitary growth factor' $pituitary_growth_factor stop_ _System_molecular_weight . _System_oligomer_state ? _System_paramagnetic ? _System_thiol_state . _Database_query_date . _Details . save_ ######################## # Monomeric polymers # ######################## save_pituitary_growth_factor _Saveframe_category monomeric_polymer _Mol_type polymer _Mol_polymer_class protein _Name_common 'pituitary growth factor' _Name_variant 'residues 1-28' _Molecular_mass . _Mol_thiol_state . _Details . ############################## # Polymer residue sequence # ############################## _Residue_count 28 _Mol_residue_sequence ; FPTIPLSRLFDNAMLRAHRL HQLAFDTY ; loop_ _Residue_seq_code _Residue_label 1 PHE 2 PRO 3 THR 4 ILE 5 PRO 6 LEU 7 SER 8 ARG 9 LEU 10 PHE 11 ASP 12 ASN 13 ALA 14 MET 15 LEU 16 ARG 17 ALA 18 HIS 19 ARG 20 LEU 21 HIS 22 GLN 23 LEU 24 ALA 25 PHE 26 ASP 27 THR 28 TYR stop_ _Sequence_homology_query_date . _Sequence_homology_query_revised_last_date 2015-11-25 loop_ _Database_name _Database_accession_code _Database_entry_mol_name _Sequence_query_to_submitted_percentage _Sequence_subject_length _Sequence_identity _Sequence_positive _Sequence_homology_expectation_value BMRB 17179 rhGH 100.00 191 100.00 100.00 2.50e-10 BMRB 25029 hGH 100.00 191 100.00 100.00 2.36e-10 BMRB 4689 "Human Growth Hormone" 100.00 191 100.00 100.00 2.36e-10 PDB 1A22 "Human Growth Hormone Bound To Single Receptor" 100.00 191 100.00 100.00 2.43e-10 PDB 1AXI "Structural Plasticity At The Hgh:hghbp Interface" 100.00 191 100.00 100.00 2.71e-10 PDB 1BP3 "The Xray Structure Of A Growth Hormone-Prolactin Receptor Complex" 100.00 191 100.00 100.00 2.43e-10 PDB 1HWG "1:2 Complex Of Human Growth Hormone With Its Soluble Binding Protein" 100.00 191 100.00 100.00 2.36e-10 PDB 1HWH "1:1 Complex Of Human Growth Hormone Mutant G120r With Its Soluble Binding Protein" 100.00 191 100.00 100.00 2.43e-10 PDB 3HHR "Human Growth Hormone And Extracellular Domain Of Its Receptor: Crystal Structure Of The Complex" 100.00 190 100.00 100.00 2.98e-10 DBJ BAJ21175 "growth hormone 1 [synthetic construct]" 100.00 217 100.00 100.00 2.63e-10 GB AAA18842 "growth hormone [Macaca mulatta]" 100.00 217 100.00 100.00 2.36e-10 GB AAA52549 "growth hormone GH-1 [Homo sapiens]" 100.00 217 100.00 100.00 2.63e-10 GB AAA72260 "human growth hormone [synthetic construct]" 100.00 192 100.00 100.00 2.39e-10 GB AAA98618 "growth hormone [Homo sapiens]" 100.00 217 100.00 100.00 2.63e-10 GB AAC42099 "growth hormone [synthetic construct]" 100.00 192 100.00 100.00 2.39e-10 PRF 1101354A "somatotropin 1-43" 100.00 43 100.00 100.00 9.87e-11 REF NP_000506 "somatotropin isoform 1 precursor [Homo sapiens]" 100.00 217 100.00 100.00 2.63e-10 REF NP_001036203 "somatotropin precursor [Macaca mulatta]" 100.00 217 100.00 100.00 2.36e-10 REF NP_001184093 "somatotropin precursor [Pan troglodytes]" 100.00 217 100.00 100.00 2.97e-10 REF NP_001277213 "growth hormone 1 precursor [Macaca fascicularis]" 100.00 217 100.00 100.00 2.36e-10 REF NP_001277233 "growth hormone 1 precursor [Papio anubis]" 100.00 217 100.00 100.00 2.50e-10 SP P01241 "RecName: Full=Somatotropin; AltName: Full=Growth hormone; Short=GH; Short=GH-N; AltName: Full=Growth hormone 1; AltName: Full=P" 100.00 217 100.00 100.00 2.63e-10 SP P33093 "RecName: Full=Somatotropin; AltName: Full=Growth hormone; Short=GH; Short=GH-N; AltName: Full=Growth hormone 1; AltName: Full=P" 100.00 217 100.00 100.00 2.36e-10 SP P58756 "RecName: Full=Somatotropin; AltName: Full=Growth hormone; Short=GH; Short=GH-N; AltName: Full=Growth hormone 1; AltName: Full=P" 100.00 217 100.00 100.00 2.97e-10 TPE CDW51387 "TPA: growth hormone B5 [Homo sapiens]" 100.00 217 100.00 100.00 2.63e-10 TPE CDW51389 "TPA: growth hormone B2 [Pan troglodytes]" 100.00 217 100.00 100.00 2.97e-10 TPE CDW51391 "TPA: growth hormone B2 [Gorilla gorilla]" 100.00 217 100.00 100.00 2.60e-10 TPE CDW51394 "TPA: growth hormone B2 [Pongo abelii]" 100.00 217 100.00 100.00 2.66e-10 TPE CDW51396 "TPA: growth hormone B4 [Pongo abelii]" 100.00 217 100.00 100.00 2.66e-10 stop_ save_ #################### # Natural source # #################### save_natural_source _Saveframe_category natural_source loop_ _Mol_label _Organism_name_common _NCBI_taxonomy_ID _Superkingdom _Kingdom _Genus _Species _Strain _Tissue $pituitary_growth_factor human 9606 Eukaryota Metazoa Homo sapiens generic pituitary stop_ save_ ######################### # Experimental source # ######################### save_experimental_source _Saveframe_category experimental_source loop_ _Mol_label _Production_method _Host_organism_name_common _Genus _Species _Strain _Vector_name $pituitary_growth_factor 'not available' . . . . . stop_ save_ ##################################### # Sample contents and methodology # ##################################### ######################## # Sample description # ######################## save_sample_one _Saveframe_category sample _Sample_type solution _Details . save_ ######################### # Experimental detail # ######################### ################################## # NMR Spectrometer definitions # ################################## save_spectrometer_list _Saveframe_category NMR_spectrometer _Manufacturer unknown _Model unknown _Field_strength 0 _Details 'spectrometer information not available' save_ ############################# # NMR applied experiments # ############################# save__1 _Saveframe_category NMR_applied_experiment _Sample_label $sample_one save_ ####################### # Sample conditions # ####################### save_sample_condition_set_one _Saveframe_category sample_conditions _Details . loop_ _Variable_type _Variable_value _Variable_value_error _Variable_value_units pH 3 . na temperature 295 . K stop_ save_ #################### # NMR parameters # #################### ############################## # Assigned chemical shifts # ############################## ################################ # Chemical shift referencing # ################################ save_chem_shift_reference_par_set_one _Saveframe_category chemical_shift_reference _Details . loop_ _Mol_common_name _Atom_type _Atom_isotope_number _Atom_group _Chem_shift_units _Chem_shift_value _Reference_method _Reference_type _External_reference_sample_geometry _External_reference_location _External_reference_axis _Indirect_shift_ratio_citation_label _Correction_value_citation_label DSS H . . ppm 0 . . . . . $entry_citation $entry_citation stop_ save_ ################################### # Assigned chemical shift lists # ################################### ################################################################### # Chemical Shift Ambiguity Index Value Definitions # # # # The values other than 1 are used for those atoms with different # # chemical shifts that cannot be assigned to stereospecific atoms # # or to specific residues or chains. # # # # Index Value Definition # # # # 1 Unique (including isolated methyl protons, # # geminal atoms, and geminal methyl # # groups with identical chemical shifts) # # (e.g. ILE HD11, HD12, HD13 protons) # # 2 Ambiguity of geminal atoms or geminal methyl # # proton groups (e.g. ASP HB2 and HB3 # # protons, LEU CD1 and CD2 carbons, or # # LEU HD11, HD12, HD13 and HD21, HD22, # # HD23 methyl protons) # # 3 Aromatic atoms on opposite sides of # # symmetrical rings (e.g. TYR HE1 and HE2 # # protons) # # 4 Intraresidue ambiguities (e.g. LYS HG and # # HD protons or TRP HZ2 and HZ3 protons) # # 5 Interresidue ambiguities (LYS 12 vs. LYS 27) # # 6 Intermolecular ambiguities (e.g. ASP 31 CA # # in monomer 1 and ASP 31 CA in monomer 2 # # of an asymmetrical homodimer, duplex # # DNA assignments, or other assignments # # that may apply to atoms in one or more # # molecule in the molecular assembly) # # 9 Ambiguous, specific ambiguity not defined # # # ################################################################### save_chemical_shift_assignment_data_set_one _Saveframe_category assigned_chemical_shifts _Details . loop_ _Sample_label $sample_one stop_ _Sample_conditions_label $sample_condition_set_one _Chem_shift_reference_set_label $chem_shift_reference_par_set_one _Mol_system_component_name 'pituitary growth factor' _Text_data_format . _Text_data . loop_ _Atom_shift_assign_ID _Residue_author_seq_code _Residue_seq_code _Residue_label _Atom_name _Atom_type _Chem_shift_value _Chem_shift_value_error _Chem_shift_ambiguity_code 1 . 1 PHE HA H 4.52 . 1 2 . 1 PHE HB2 H 3.05 . 2 3 . 1 PHE HB3 H 3.31 . 2 4 . 1 PHE HD1 H 7.14 . 1 5 . 1 PHE HD2 H 7.14 . 1 6 . 1 PHE HE1 H 7.23 . 1 7 . 1 PHE HE2 H 7.23 . 1 8 . 1 PHE HZ H 7.35 . 1 9 . 2 PRO HA H 4.56 . 1 10 . 2 PRO HB2 H 1.84 . 2 11 . 2 PRO HB3 H 2.25 . 2 12 . 2 PRO HG2 H 1.93 . 1 13 . 2 PRO HG3 H 1.93 . 1 14 . 2 PRO HD2 H 3.37 . 2 15 . 2 PRO HD3 H 3.73 . 2 16 . 3 THR H H 8.35 . 1 17 . 3 THR HA H 4.27 . 1 18 . 3 THR HB H 4.11 . 1 19 . 3 THR HG2 H 1.15 . 1 20 . 4 ILE H H 8.24 . 1 21 . 4 ILE HA H 4.47 . 1 22 . 4 ILE HB H 1.8 . 1 23 . 4 ILE HG12 H 1.56 . 1 24 . 4 ILE HG13 H 1.56 . 1 25 . 4 ILE HG2 H .88 . 1 26 . 4 ILE HD1 H .83 . 1 27 . 5 PRO HA H 4.34 . 1 28 . 5 PRO HB2 H 1.86 . 2 29 . 5 PRO HB3 H 2.23 . 2 30 . 5 PRO HG2 H 1.95 . 1 31 . 5 PRO HG3 H 1.95 . 1 32 . 5 PRO HD2 H 3.1 . 2 33 . 5 PRO HD3 H 3.57 . 2 34 . 6 LEU H H 8.32 . 1 35 . 6 LEU HA H 4.18 . 1 36 . 6 LEU HB2 H 1.66 . 1 37 . 6 LEU HB3 H 1.66 . 1 38 . 6 LEU HG H 1.56 . 1 39 . 6 LEU HD1 H .77 . 1 40 . 6 LEU HD2 H .77 . 1 41 . 7 SER H H 8.23 . 1 42 . 7 SER HA H 4.26 . 1 43 . 7 SER HB2 H 3.88 . 2 44 . 7 SER HB3 H 3.81 . 2 45 . 8 ARG H H 8.21 . 1 46 . 8 ARG HA H 4.26 . 1 47 . 8 ARG HB2 H 1.73 . 2 48 . 8 ARG HB3 H 1.79 . 2 49 . 8 ARG HG2 H 1.555 . 2 50 . 8 ARG HG3 H 1.71 . 2 51 . 8 ARG HD2 H 3.1 . 1 52 . 8 ARG HD3 H 3.1 . 1 53 . 9 LEU H H 7.95 . 1 54 . 9 LEU HA H 4.15 . 1 55 . 9 LEU HB2 H 1.49 . 1 56 . 9 LEU HB3 H 1.49 . 1 57 . 9 LEU HG H 1.39 . 1 58 . 9 LEU HD1 H .84 . 1 59 . 9 LEU HD2 H .84 . 1 60 . 10 PHE H H 8.03 . 1 61 . 10 PHE HA H 4.53 . 1 62 . 10 PHE HB2 H 2.96 . 2 63 . 10 PHE HB3 H 3.12 . 2 64 . 10 PHE HD1 H 7.14 . 1 65 . 10 PHE HD2 H 7.14 . 1 66 . 10 PHE HE1 H 7.23 . 1 67 . 10 PHE HE2 H 7.23 . 1 68 . 10 PHE HZ H 7.35 . 1 69 . 11 ASP H H 8.06 . 1 70 . 11 ASP HA H 4.5 . 1 71 . 11 ASP HB2 H 2.67 . 1 72 . 11 ASP HB3 H 2.67 . 1 73 . 12 ASN H H 8.29 . 1 74 . 12 ASN HA H 4.49 . 1 75 . 12 ASN HB2 H 2.83 . 1 76 . 12 ASN HB3 H 2.83 . 1 77 . 12 ASN HD21 H 7.65 . 1 78 . 12 ASN HD22 H 7.65 . 1 79 . 13 ALA H H 8.35 . 1 80 . 13 ALA HA H 4.05 . 1 81 . 13 ALA HB H 1.41 . 1 82 . 14 MET H H 8.11 . 1 83 . 14 MET HA H 4.24 . 1 84 . 14 MET HB2 H 2.06 . 1 85 . 14 MET HB3 H 2.06 . 1 86 . 14 MET HG2 H 2.4 . 2 87 . 14 MET HG3 H 2.54 . 2 88 . 14 MET HE H 2.25 . 1 89 . 15 LEU H H 7.91 . 1 90 . 15 LEU HA H 4.25 . 1 91 . 15 LEU HB2 H 1.71 . 1 92 . 15 LEU HB3 H 1.71 . 1 93 . 15 LEU HG H 1.61 . 1 94 . 15 LEU HD1 H .82 . 1 95 . 15 LEU HD2 H .82 . 1 96 . 16 ARG H H 7.98 . 1 97 . 16 ARG HA H 4.06 . 1 98 . 16 ARG HB2 H 1.82 . 1 99 . 16 ARG HB3 H 1.82 . 1 100 . 16 ARG HG2 H 1.555 . 2 101 . 16 ARG HG3 H 1.71 . 2 102 . 16 ARG HD2 H 3.1 . 1 103 . 16 ARG HD3 H 3.1 . 1 104 . 17 ALA H H 7.91 . 1 105 . 17 ALA HA H 4.13 . 1 106 . 17 ALA HB H 1.36 . 1 107 . 18 HIS H H 8.19 . 1 108 . 18 HIS HA H 4.54 . 1 109 . 18 HIS HB2 H 3.2 . 2 110 . 18 HIS HB3 H 3.28 . 2 111 . 18 HIS HD2 H 7.19 . 1 112 . 18 HIS HE1 H 8.32 . 1 113 . 19 ARG H H 8.27 . 1 114 . 19 ARG HA H 4.22 . 1 115 . 19 ARG HB2 H 1.79 . 2 116 . 19 ARG HB3 H 1.8 . 2 117 . 19 ARG HG2 H 1.555 . 2 118 . 19 ARG HG3 H 2.05 . 2 119 . 19 ARG HD2 H 3.1 . 1 120 . 19 ARG HD3 H 3.1 . 1 121 . 20 LEU H H 8.14 . 1 122 . 20 LEU HA H 4.15 . 1 123 . 20 LEU HB2 H 1.58 . 1 124 . 20 LEU HB3 H 1.58 . 1 125 . 20 LEU HG H 1.5 . 1 126 . 20 LEU HD1 H .9 . 1 127 . 20 LEU HD2 H .9 . 1 128 . 21 HIS H H 8.31 . 1 129 . 21 HIS HA H 4.55 . 1 130 . 21 HIS HB2 H 3.2 . 2 131 . 21 HIS HB3 H 3.28 . 2 132 . 21 HIS HD2 H 7.19 . 1 133 . 21 HIS HE1 H 8.32 . 1 134 . 22 GLN H H 8.15 . 1 135 . 22 GLN HA H 4.19 . 1 136 . 22 GLN HB2 H 2.03 . 1 137 . 22 GLN HB3 H 2.03 . 1 138 . 22 GLN HG2 H 2.25 . 1 139 . 22 GLN HG3 H 2.25 . 1 140 . 23 LEU H H 8.22 . 1 141 . 23 LEU HA H 4.23 . 1 142 . 23 LEU HB2 H 1.57 . 1 143 . 23 LEU HB3 H 1.57 . 1 144 . 23 LEU HG H 1.47 . 1 145 . 23 LEU HD1 H .85 . 1 146 . 23 LEU HD2 H .85 . 1 147 . 24 ALA H H 8.1 . 1 148 . 24 ALA HA H 4.16 . 1 149 . 24 ALA HB H 1.25 . 1 150 . 25 PHE H H 7.95 . 1 151 . 25 PHE HA H 4.52 . 1 152 . 25 PHE HB2 H 2.93 . 2 153 . 25 PHE HB3 H 3.11 . 2 154 . 25 PHE HD1 H 7.14 . 1 155 . 25 PHE HD2 H 7.14 . 1 156 . 25 PHE HE1 H 7.23 . 1 157 . 25 PHE HE2 H 7.23 . 1 158 . 25 PHE HZ H 7.35 . 1 159 . 26 ASP H H 8.21 . 1 160 . 26 ASP HA H 4.57 . 1 161 . 26 ASP HB2 H 2.61 . 1 162 . 26 ASP HB3 H 2.61 . 1 163 . 27 THR H H 7.86 . 1 164 . 27 THR HA H 4.23 . 1 165 . 27 THR HB H 4.14 . 1 166 . 27 THR HG2 H 1.06 . 1 167 . 28 TYR H H 7.74 . 1 168 . 28 TYR HA H 4.33 . 1 169 . 28 TYR HB2 H 2.99 . 2 170 . 28 TYR HB3 H 2.8 . 2 171 . 28 TYR HD1 H 7.04 . 1 172 . 28 TYR HD2 H 7.04 . 1 173 . 28 TYR HE1 H 6.73 . 1 174 . 28 TYR HE2 H 6.73 . 1 stop_ save_