data_4631 ####################### # Entry information # ####################### save_entry_information _Saveframe_category entry_information _Entry_title ; PEPTIDE FRAGMENT THR671-LEU690 OF THE RABBIT SKELETAL DIHYDROPYRIDINE RECEPTOR ; _BMRB_accession_number 4631 _BMRB_flat_file_name bmr4631.str _Entry_type original _Submission_date 2000-01-13 _Accession_date 2001-03-10 _Entry_origination author _NMR_STAR_version 2.1.1 _Experimental_method NMR _Details . loop_ _Author_ordinal _Author_family_name _Author_given_name _Author_middle_initials _Author_family_title 1 Casarotto M. . . 2 Dulhunty A. . . stop_ loop_ _Saveframe_category_type _Saveframe_category_type_count coupling_constants 1 stop_ loop_ _Data_type _Data_type_count "coupling constants" 10 stop_ loop_ _Revision_date _Revision_keyword _Revision_author _Revision_detail 2001-05-07 original author . stop_ _Original_release_date 2001-05-07 save_ ############################# # Citation for this entry # ############################# save_entry_citation _Saveframe_category entry_citation _Citation_full . _Citation_title ; A structural requirement for activation of skeletal ryanodine receptors by peptides of the dihydropyridine receptor II-III loop ; _Citation_status published _Citation_type journal _CAS_abstract_code . _MEDLINE_UI_code . _PubMed_ID 10766780 loop_ _Author_ordinal _Author_family_name _Author_given_name _Author_middle_initials _Author_family_title 1 Casarotto M. . . 2 Gibson F. . . 3 Pace S. M. . 4 Curtis S. M. . 5 Mulcair M. . . 6 Dulhunty A. F. . stop_ _Journal_abbreviation 'J. Biol. Chem.' _Journal_volume 275 _Journal_issue . _Journal_CSD . _Book_chapter_title . _Book_volume . _Book_series . _Book_ISBN . _Conference_state_province . _Conference_abstract_number . _Page_first 11631 _Page_last 11637 _Year 2000 _Details . loop_ _Keyword 'DIHYDROPYRIDINE RECEPTOR' 'RYANODINE RECEPTOR' 'NMR STRUCTURE' stop_ save_ ################################## # Molecular system description # ################################## save_system_SDR _Saveframe_category molecular_system _Mol_system_name 'SKELETAL DIHYDROPYRIDINE RECEPTOR' _Abbreviation_common 'SKELETAL DIHYDROPYRIDINE RECEPTOR' _Enzyme_commission_number . loop_ _Mol_system_component_name _Mol_label 'SKELETAL DIHYDROPYRIDINE RECEPTOR' $SDR stop_ _System_molecular_weight . _System_physical_state native _System_oligomer_state monomer _System_paramagnetic no _System_thiol_state 'not present' _Database_query_date . _Details . save_ ######################## # Monomeric polymers # ######################## save_SDR _Saveframe_category monomeric_polymer _Mol_type polymer _Mol_polymer_class protein _Name_common 'SKELETAL DIHYDROPYRIDINE RECEPTOR' _Abbreviation_common 'SKELETAL DIHYDROPYRIDINE RECEPTOR' _Molecular_mass . _Mol_thiol_state 'not present' _Details . ############################## # Polymer residue sequence # ############################## _Residue_count 20 _Mol_residue_sequence TSAQKAKAEERKRRKMSRGL loop_ _Residue_seq_code _Residue_label 1 THR 2 SER 3 ALA 4 GLN 5 LYS 6 ALA 7 LYS 8 ALA 9 GLU 10 GLU 11 ARG 12 LYS 13 ARG 14 ARG 15 LYS 16 MET 17 SER 18 ARG 19 GLY 20 LEU stop_ _Sequence_homology_query_date . _Sequence_homology_query_revised_last_date 2015-07-28 loop_ _Database_name _Database_accession_code _Database_entry_mol_name _Sequence_query_to_submitted_percentage _Sequence_subject_length _Sequence_identity _Sequence_positive _Sequence_homology_expectation_value PDB 1DU1 "Peptide Fragment Thr671-Leu690 Of The Rabbit Skeletal Dihydropyridine Receptor" 100.00 20 100.00 100.00 1.38e-02 PDB 1JZP "Modified Peptide A (D18-A1) Of The Rabbit Skeletal Dihydropyridine Receptor" 100.00 21 100.00 100.00 1.37e-02 DBJ BAG54980 "voltage-dependent L type calcium channel alpha 1S subunit [Rattus norvegicus]" 100.00 1850 100.00 100.00 2.99e-03 EMBL CAA29355 "unnamed protein product [Oryctolagus cuniculus]" 100.00 1873 100.00 100.00 2.99e-03 GB AAA31159 "dihydropyridine calcium channel receptor protein [Oryctolagus cuniculus]" 100.00 1873 100.00 100.00 2.99e-03 GB EDM09669 "rCG46528 [Rattus norvegicus]" 100.00 640 100.00 100.00 2.43e-03 GB EHB03768 "Voltage-dependent L-type calcium channel subunit alpha-1S [Heterocephalus glaber]" 100.00 1863 100.00 100.00 2.99e-03 GB ELK19087 "Voltage-dependent L-type calcium channel subunit alpha-1S [Pteropus alecto]" 100.00 1812 100.00 100.00 3.22e-03 GB EMP32289 "Voltage-dependent L-type calcium channel subunit alpha-1S [Chelonia mydas]" 90.00 1245 100.00 100.00 6.35e-02 PRF 1310328A "Ca channel blocker receptor" 100.00 1873 100.00 100.00 2.99e-03 REF NP_001095190 "voltage-dependent L-type calcium channel subunit alpha-1S [Oryctolagus cuniculus]" 100.00 1873 100.00 100.00 2.99e-03 REF NP_001292076 "voltage-dependent L-type calcium channel subunit alpha-1S isoform 1 [Gallus gallus]" 95.00 1836 100.00 100.00 1.06e-02 REF NP_001292077 "voltage-dependent L-type calcium channel subunit alpha-1S isoform 2 [Gallus gallus]" 95.00 1817 100.00 100.00 1.06e-02 REF NP_446325 "voltage-dependent L-type calcium channel subunit alpha-1S [Rattus norvegicus]" 100.00 1850 100.00 100.00 2.99e-03 REF XP_003474895 "PREDICTED: voltage-dependent L-type calcium channel subunit alpha-1S isoform X1 [Cavia porcellus]" 100.00 1867 100.00 100.00 2.99e-03 SP P07293 "RecName: Full=Voltage-dependent L-type calcium channel subunit alpha-1S; AltName: Full=Calcium channel, L type, alpha-1 polypep" 100.00 1873 100.00 100.00 2.99e-03 stop_ save_ #################### # Natural source # #################### save_natural_source _Saveframe_category natural_source loop_ _Mol_label _Organism_name_common _NCBI_taxonomy_ID _Superkingdom _Kingdom _Genus _Species _Tissue $SDR rabbit 9986 Eukaryota Metazoa Oryctolagus cuniculus 'SKELETAL MUSCLE' stop_ save_ ######################### # Experimental source # ######################### save_experimental_source _Saveframe_category experimental_source loop_ _Mol_label _Production_method _Host_organism_name_common _Genus _Species _Strain _Vector_name $SDR . . . . . . stop_ save_ ##################################### # Sample contents and methodology # ##################################### ######################## # Sample description # ######################## save_sample_1 _Saveframe_category sample _Sample_type solution _Details . loop_ _Mol_label _Concentration_value _Concentration_value_units _Isotopic_labeling $SDR 4 mM . H2O 90 % . D2O 10 % . stop_ save_ ############################ # Computer software used # ############################ save_X-PLOR _Saveframe_category software _Name X-PLOR _Version 3.1 loop_ _Task refinement stop_ _Details Brunger save_ ######################### # Experimental detail # ######################### ################################## # NMR Spectrometer definitions # ################################## save_spectrometer_1 _Saveframe_category NMR_spectrometer _Manufacturer Varian _Model INOVA _Field_strength 600 _Details . save_ ############################# # NMR applied experiments # ############################# save_2D_NOESY_1 _Saveframe_category NMR_applied_experiment _Experiment_name '2D NOESY' _Sample_label $sample_1 save_ save_DQF-COSY_2 _Saveframe_category NMR_applied_experiment _Experiment_name DQF-COSY _Sample_label $sample_1 save_ ####################### # Sample conditions # ####################### save_sample_cond_1 _Saveframe_category sample_conditions _Details . loop_ _Variable_type _Variable_value _Variable_value_error _Variable_value_units pH 5.0 . pH temperature 278 . K 'ionic strength' 0 . M pressure 1 . atm stop_ save_ ######################## # Coupling constants # ######################## save_JHNHA _Saveframe_category coupling_constants _Details . loop_ _Sample_label $sample_1 stop_ _Sample_conditions_label $sample_cond_1 _Spectrometer_frequency_1H 600 _Mol_system_component_name 'SKELETAL DIHYDROPYRIDINE RECEPTOR' _Text_data_format . _Text_data . loop_ _Coupling_constant_ID _Coupling_constant_code _Atom_one_residue_seq_code _Atom_one_residue_label _Atom_one_name _Atom_two_residue_seq_code _Atom_two_residue_label _Atom_two_name _Coupling_constant_value _Coupling_constant_min_value _Coupling_constant_max_value _Coupling_constant_value_error 1 3JHNHA 2 SER H 2 SER HA 5.1 . . . 2 3JHNHA 3 ALA H 3 ALA HA 5.2 . . . 3 3JHNHA 4 GLN H 4 GLN HA 5.7 . . . 4 3JHNHA 6 ALA H 6 ALA HA 4.3 . . . 5 3JHNHA 7 LYS H 7 LYS HA 5.7 . . . 6 3JHNHA 8 ALA H 8 ALA HA 5.3 . . . 7 3JHNHA 12 LYS H 12 LYS HA 5.7 . . . 8 3JHNHA 11 ARG H 11 ARG HA 5.9 . . . 9 3JHNHA 17 SER H 17 SER HA 7.2 . . . 10 3JHNHA 20 LEU H 20 LEU HA 7.2 . . . stop_ save_