data_25749 ####################### # Entry information # ####################### save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID 25749 _Entry.Title ; C4VG16KRKP ; _Entry.Type macromolecule _Entry.Version_type original _Entry.Submission_date 2015-08-11 _Entry.Accession_date 2015-08-11 _Entry.Last_release_date 2016-03-21 _Entry.Original_release_date 2016-03-21 _Entry.Origination author _Entry.NMR_STAR_version 3.1.1.99 _Entry.Original_NMR_STAR_version 3.1 _Entry.Experimental_method NMR _Entry.Experimental_method_subtype SOLUTION _Entry.Details . _Entry.BMRB_internal_directory_name . loop_ _Entry_author.Ordinal _Entry_author.Given_name _Entry_author.Family_name _Entry_author.First_initial _Entry_author.Middle_initials _Entry_author.Family_title _Entry_author.ORCID _Entry_author.Entry_ID 1 Anirban Bhunia . . . . 25749 2 Aritreyee Datta . . . . 25749 stop_ loop_ _SG_project.SG_project_ID _SG_project.Project_name _SG_project.Full_name_of_center _SG_project.Initial_of_center _SG_project.Entry_ID 1 'not applicable' 'not applicable' . 25749 stop_ loop_ _Struct_keywords.Keywords _Struct_keywords.Text _Struct_keywords.Entry_ID 'lipidated peptide' . 25749 stop_ loop_ _Data_set.Type _Data_set.Count _Data_set.Entry_ID assigned_chemical_shifts 1 25749 stop_ loop_ _Datum.Type _Datum.Count _Datum.Entry_ID '1H chemical shifts' 101 25749 stop_ loop_ _Release.Release_number _Release.Format_type _Release.Format_version _Release.Date _Release.Submission_date _Release.Type _Release.Author _Release.Detail _Release.Entry_ID 1 . . 2016-03-21 . original BMRB . 25749 stop_ loop_ _Related_entries.Database_name _Related_entries.Database_accession_code _Related_entries.Relationship _Related_entries.Entry_ID BMRB 25751 'VG16KRKP dimer' 25749 PDB 2N63 'BMRB Entry Tracking System' 25749 stop_ save_ ############### # Citations # ############### save_entry_citation _Citation.Sf_category citations _Citation.Sf_framecode entry_citation _Citation.Entry_ID 25749 _Citation.ID 1 _Citation.Class 'entry citation' _Citation.CAS_abstract_code . _Citation.MEDLINE_UI_code . _Citation.DOI . _Citation.PubMed_ID 26407061 _Citation.Full_citation . _Citation.Title ; Designing potent antimicrobial peptides by disulphide linked dimerization and N-terminal lipidation to increase antimicrobial activity and membrane perturbation: Structural insights into lipopolysaccharide binding ; _Citation.Status published _Citation.Type journal _Citation.Journal_abbrev 'J. Colloid. Interface Sci.' _Citation.Journal_name_full . _Citation.Journal_volume 461 _Citation.Journal_issue . _Citation.Journal_ASTM . _Citation.Journal_ISSN . _Citation.Journal_CSD . _Citation.Book_title . _Citation.Book_chapter_title . _Citation.Book_volume . _Citation.Book_series . _Citation.Book_publisher . _Citation.Book_publisher_city . _Citation.Book_ISBN . _Citation.Conference_title . _Citation.Conference_site . _Citation.Conference_state_province . _Citation.Conference_country . _Citation.Conference_start_date . _Citation.Conference_end_date . _Citation.Conference_abstract_number . _Citation.Thesis_institution . _Citation.Thesis_institution_city . _Citation.Thesis_institution_country . _Citation.WWW_URL . _Citation.Page_first 335 _Citation.Page_last 345 _Citation.Year 2016 _Citation.Details . loop_ _Citation_author.Ordinal _Citation_author.Given_name _Citation_author.Family_name _Citation_author.First_initial _Citation_author.Middle_initials _Citation_author.Family_title _Citation_author.ORCID _Citation_author.Entry_ID _Citation_author.Citation_ID 1 Aritreyee Datta . . . . 25749 1 2 Pallob Kundu . . . . 25749 1 3 Anirban Bhunia . . . . 25749 1 stop_ save_ ############################################# # Molecular system (assembly) description # ############################################# save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID 25749 _Assembly.ID 1 _Assembly.Name C4VG16KRKP _Assembly.BMRB_code . _Assembly.Number_of_components 1 _Assembly.Organic_ligands . _Assembly.Metal_ions . _Assembly.Non_standard_bonds . _Assembly.Ambiguous_conformational_states . _Assembly.Ambiguous_chem_comp_sites . _Assembly.Molecules_in_chemical_exchange . _Assembly.Paramagnetic no _Assembly.Thiol_state . _Assembly.Molecular_mass . _Assembly.Enzyme_commission_number . _Assembly.Details . _Assembly.DB_query_date . _Assembly.DB_query_revised_last_date . loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Asym_ID _Entity_assembly.PDB_chain_ID _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 entity 1 $entity A . yes native no no . . . 25749 1 stop_ save_ #################################### # Biological polymers and ligands # #################################### save_entity _Entity.Sf_category entity _Entity.Sf_framecode entity _Entity.Entry_ID 25749 _Entity.ID 1 _Entity.BMRB_code . _Entity.Name entity _Entity.Type polymer _Entity.Polymer_common_type . _Entity.Polymer_type polypeptide(L) _Entity.Polymer_type_details . _Entity.Polymer_strand_ID A _Entity.Polymer_seq_one_letter_code_can . _Entity.Polymer_seq_one_letter_code ; XVARGWKRKCPLFGKGG ; _Entity.Target_identifier . _Entity.Polymer_author_defined_seq . _Entity.Polymer_author_seq_details 'Residue 1 i.e. M corresponds to a 4 carbon long acyl chain (-CH2-CH2-CH2-CH3)' _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Nonpolymer_comp_ID . _Entity.Nonpolymer_comp_label . _Entity.Number_of_monomers 17 _Entity.Number_of_nonpolymer_components . _Entity.Paramagnetic no _Entity.Thiol_state . _Entity.Src_method man _Entity.Parent_entity_ID . _Entity.Fragment . _Entity.Mutation . _Entity.EC_number . _Entity.Calc_isoelectric_point . _Entity.Formula_weight 1896.363 _Entity.Formula_weight_exptl . _Entity.Formula_weight_exptl_meth . _Entity.Details . _Entity.DB_query_date . _Entity.DB_query_revised_last_date . loop_ _Entity_comp_index.ID _Entity_comp_index.Auth_seq_ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 . PTL . 25749 1 2 . VAL . 25749 1 3 . ALA . 25749 1 4 . ARG . 25749 1 5 . GLY . 25749 1 6 . TRP . 25749 1 7 . LYS . 25749 1 8 . ARG . 25749 1 9 . LYS . 25749 1 10 . CYS . 25749 1 11 . PRO . 25749 1 12 . LEU . 25749 1 13 . PHE . 25749 1 14 . GLY . 25749 1 15 . LYS . 25749 1 16 . GLY . 25749 1 17 . GLY . 25749 1 stop_ loop_ _Entity_poly_seq.Hetero _Entity_poly_seq.Mon_ID _Entity_poly_seq.Num _Entity_poly_seq.Comp_index_ID _Entity_poly_seq.Entry_ID _Entity_poly_seq.Entity_ID . PTL 1 1 25749 1 . VAL 2 2 25749 1 . ALA 3 3 25749 1 . ARG 4 4 25749 1 . GLY 5 5 25749 1 . TRP 6 6 25749 1 . LYS 7 7 25749 1 . ARG 8 8 25749 1 . LYS 9 9 25749 1 . CYS 10 10 25749 1 . PRO 11 11 25749 1 . LEU 12 12 25749 1 . PHE 13 13 25749 1 . GLY 14 14 25749 1 . LYS 15 15 25749 1 . GLY 16 16 25749 1 . GLY 17 17 25749 1 stop_ save_ #################### # Natural source # #################### save_natural_source _Entity_natural_src_list.Sf_category natural_source _Entity_natural_src_list.Sf_framecode natural_source _Entity_natural_src_list.Entry_ID 25749 _Entity_natural_src_list.ID 1 loop_ _Entity_natural_src.ID _Entity_natural_src.Entity_ID _Entity_natural_src.Entity_label _Entity_natural_src.Entity_chimera_segment_ID _Entity_natural_src.NCBI_taxonomy_ID _Entity_natural_src.Type _Entity_natural_src.Common _Entity_natural_src.Organism_name_scientific _Entity_natural_src.Organism_name_common _Entity_natural_src.Organism_acronym _Entity_natural_src.ICTVdb_decimal_code _Entity_natural_src.Superkingdom _Entity_natural_src.Kingdom _Entity_natural_src.Genus _Entity_natural_src.Species _Entity_natural_src.Strain _Entity_natural_src.Variant _Entity_natural_src.Organ _Entity_natural_src.Tissue _Entity_natural_src.Tissue_fraction _Entity_natural_src.Cell_line _Entity_natural_src.Cell_type _Entity_natural_src.ATCC_number _Entity_natural_src.Organelle _Entity_natural_src.Secretion _Entity_natural_src.Plasmid _Entity_natural_src.Gene_mnemonic _Entity_natural_src.Details _Entity_natural_src.Entry_ID _Entity_natural_src.Entity_natural_src_list_ID 1 1 $entity . . 'no natural source' . . . . . . . . . . . . . . . . . . . . . . 25749 1 stop_ save_ ######################### # Experimental source # ######################### save_experimental_source _Entity_experimental_src_list.Sf_category experimental_source _Entity_experimental_src_list.Sf_framecode experimental_source _Entity_experimental_src_list.Entry_ID 25749 _Entity_experimental_src_list.ID 1 loop_ _Entity_experimental_src.ID _Entity_experimental_src.Entity_ID _Entity_experimental_src.Entity_label _Entity_experimental_src.Entity_chimera_segment_ID _Entity_experimental_src.Production_method _Entity_experimental_src.Host_org_scientific_name _Entity_experimental_src.Host_org_name_common _Entity_experimental_src.Host_org_details _Entity_experimental_src.Host_org_NCBI_taxonomy_ID _Entity_experimental_src.Host_org_genus _Entity_experimental_src.Host_org_species _Entity_experimental_src.Host_org_strain _Entity_experimental_src.Host_org_variant _Entity_experimental_src.Host_org_ATCC_number _Entity_experimental_src.Vector_type _Entity_experimental_src.PDBview_host_org_vector_name _Entity_experimental_src.PDBview_plasmid_name _Entity_experimental_src.Vector_name _Entity_experimental_src.Vector_details _Entity_experimental_src.Vendor_name _Entity_experimental_src.Details _Entity_experimental_src.Entry_ID _Entity_experimental_src.Entity_experimental_src_list_ID 1 1 $entity . 'chemical synthesis' . . . . . . . . . . . . . . . . 25749 1 stop_ save_ ################################# # Polymer residues and ligands # ################################# save_chem_comp_PTL _Chem_comp.Sf_category chem_comp _Chem_comp.Sf_framecode chem_comp_PTL _Chem_comp.Entry_ID 25749 _Chem_comp.ID PTL _Chem_comp.Provenance PDB _Chem_comp.Name PENTANAL _Chem_comp.Type NON-POLYMER _Chem_comp.BMRB_code PTL _Chem_comp.PDB_code PTL _Chem_comp.Ambiguous_flag no _Chem_comp.Initial_date 2012-11-20 _Chem_comp.Modified_date 2012-11-20 _Chem_comp.Release_status REL _Chem_comp.Replaced_by . _Chem_comp.Replaces . _Chem_comp.One_letter_code . _Chem_comp.Three_letter_code PTL _Chem_comp.Number_atoms_all 16 _Chem_comp.Number_atoms_nh 6 _Chem_comp.PubChem_code . _Chem_comp.Subcomponent_list . _Chem_comp.InChI_code InChI=1S/C5H10O/c1-2-3-4-5-6/h5H,2-4H2,1H3 _Chem_comp.Mon_nstd_flag . _Chem_comp.Mon_nstd_class . _Chem_comp.Mon_nstd_details . _Chem_comp.Mon_nstd_parent . _Chem_comp.Mon_nstd_parent_comp_ID . _Chem_comp.Std_deriv_one_letter_code . _Chem_comp.Std_deriv_three_letter_code . _Chem_comp.Std_deriv_BMRB_code . _Chem_comp.Std_deriv_PDB_code . _Chem_comp.Std_deriv_chem_comp_name . _Chem_comp.Synonyms . _Chem_comp.Formal_charge 0 _Chem_comp.Paramagnetic . _Chem_comp.Aromatic no _Chem_comp.Formula 'C5 H10 O' _Chem_comp.Formula_weight 86.132 _Chem_comp.Formula_mono_iso_wt_nat . _Chem_comp.Formula_mono_iso_wt_13C . _Chem_comp.Formula_mono_iso_wt_15N . _Chem_comp.Formula_mono_iso_wt_13C_15N . _Chem_comp.Image_file_name . _Chem_comp.Image_file_format . _Chem_comp.Topo_file_name . _Chem_comp.Topo_file_format . _Chem_comp.Struct_file_name . _Chem_comp.Struct_file_format . _Chem_comp.Stereochem_param_file_name . _Chem_comp.Stereochem_param_file_format . _Chem_comp.Model_details . _Chem_comp.Model_erf . _Chem_comp.Model_source . _Chem_comp.Model_coordinates_details . _Chem_comp.Model_coordinates_missing_flag no _Chem_comp.Ideal_coordinates_details . _Chem_comp.Ideal_coordinates_missing_flag no _Chem_comp.Model_coordinates_db_code 1IHT _Chem_comp.Processing_site EBI _Chem_comp.Vendor . _Chem_comp.Vendor_product_code . _Chem_comp.Details . _Chem_comp.DB_query_date . _Chem_comp.DB_last_query_revised_last_date . loop_ _Chem_comp_descriptor.Descriptor _Chem_comp_descriptor.Type _Chem_comp_descriptor.Program _Chem_comp_descriptor.Program_version _Chem_comp_descriptor.Entry_ID _Chem_comp_descriptor.Comp_ID CCCCC=O SMILES CACTVS 3.341 25749 PTL CCCCC=O SMILES 'OpenEye OEToolkits' 1.5.0 25749 PTL CCCCC=O SMILES_CANONICAL CACTVS 3.341 25749 PTL CCCCC=O SMILES_CANONICAL 'OpenEye OEToolkits' 1.5.0 25749 PTL HGBOYTHUEUWSSQ-UHFFFAOYSA-N InChIKey InChI 1.03 25749 PTL InChI=1S/C5H10O/c1-2-3-4-5-6/h5H,2-4H2,1H3 InChI InChI 1.03 25749 PTL O=CCCCC SMILES ACDLabs 10.04 25749 PTL stop_ loop_ _Chem_comp_identifier.Identifier _Chem_comp_identifier.Type _Chem_comp_identifier.Program _Chem_comp_identifier.Program_version _Chem_comp_identifier.Entry_ID _Chem_comp_identifier.Comp_ID pentanal 'SYSTEMATIC NAME' ACDLabs 10.04 25749 PTL pentanal 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 1.5.0 25749 PTL stop_ loop_ _Chem_comp_atom.Atom_ID _Chem_comp_atom.BMRB_code _Chem_comp_atom.PDB_atom_ID _Chem_comp_atom.Alt_atom_ID _Chem_comp_atom.Auth_atom_ID _Chem_comp_atom.Type_symbol _Chem_comp_atom.Isotope_number _Chem_comp_atom.Chirality _Chem_comp_atom.Stereo_config _Chem_comp_atom.Charge _Chem_comp_atom.Partial_charge _Chem_comp_atom.Oxidation_number _Chem_comp_atom.Unpaired_electron_number _Chem_comp_atom.Align _Chem_comp_atom.Aromatic_flag _Chem_comp_atom.Leaving_atom_flag _Chem_comp_atom.Substruct_code _Chem_comp_atom.Ionizable _Chem_comp_atom.Drawing_2D_coord_x _Chem_comp_atom.Drawing_2D_coord_y _Chem_comp_atom.Model_Cartn_x _Chem_comp_atom.Model_Cartn_x_esd _Chem_comp_atom.Model_Cartn_y _Chem_comp_atom.Model_Cartn_y_esd _Chem_comp_atom.Model_Cartn_z _Chem_comp_atom.Model_Cartn_z_esd _Chem_comp_atom.Model_Cartn_x_ideal _Chem_comp_atom.Model_Cartn_y_ideal _Chem_comp_atom.Model_Cartn_z_ideal _Chem_comp_atom.PDBX_ordinal _Chem_comp_atom.Details _Chem_comp_atom.Entry_ID _Chem_comp_atom.Comp_ID C1 C1 C1 C1 . C . . N 0 . . . 1 no no . . . . 15.322 . 17.907 . 13.182 . -0.183 -0.393 -1.920 1 . 25749 PTL O1 O1 O1 O1 . O . . N 0 . . . 1 no no . . . . 15.021 . 16.712 . 13.254 . -0.198 0.429 -2.804 2 . 25749 PTL C2 C2 C2 C2 . C . . N 0 . . . 1 no no . . . . 16.628 . 18.524 . 13.691 . 0.624 -0.145 -0.673 3 . 25749 PTL C3 C3 C3 C3 . C . . N 0 . . . 1 no no . . . . 16.945 . 18.273 . 15.176 . -0.303 -0.145 0.543 4 . 25749 PTL C4 C4 C4 C4 . C . . N 0 . . . 1 no no . . . . 15.830 . 18.789 . 16.060 . 0.516 0.106 1.810 5 . 25749 PTL C5 C5 C5 C5 . C . . N 0 . . . 1 no no . . . . 15.973 . 18.325 . 17.500 . -0.411 0.105 3.026 6 . 25749 PTL H1 H1 H1 H1 . H . . N 0 . . . 1 no no . . . . 14.467 . 18.398 . 12.687 . -0.749 -1.308 -2.024 7 . 25749 PTL H21 H21 H21 1H2 . H . . N 0 . . . 1 no no . . . . 17.481 . 18.188 . 13.056 . 1.122 0.821 -0.749 8 . 25749 PTL H22 H22 H22 2H2 . H . . N 0 . . . 1 no no . . . . 16.641 . 19.618 . 13.477 . 1.370 -0.931 -0.561 9 . 25749 PTL H31 H31 H31 1H3 . H . . N 0 . . . 1 no no . . . . 17.164 . 17.198 . 15.374 . -0.802 -1.112 0.619 10 . 25749 PTL H32 H32 H32 2H3 . H . . N 0 . . . 1 no no . . . . 17.932 . 18.702 . 15.465 . -1.050 0.640 0.431 11 . 25749 PTL H41 H41 H41 1H4 . H . . N 0 . . . 1 no no . . . . 15.751 . 19.899 . 16.001 . 1.014 1.073 1.733 12 . 25749 PTL H42 H42 H42 2H4 . H . . N 0 . . . 1 no no . . . . 14.830 . 18.517 . 15.647 . 1.263 -0.679 1.922 13 . 25749 PTL H51 H51 H51 1H5 . H . . N 0 . . . 1 no no . . . . 15.151 . 18.705 . 18.151 . 0.172 0.285 3.929 14 . 25749 PTL H52 H52 H52 2H5 . H . . N 0 . . . 1 no no . . . . 16.052 . 17.214 . 17.558 . -1.158 0.891 2.914 15 . 25749 PTL H53 H53 H53 3H5 . H . . N 0 . . . 1 no no . . . . 16.972 . 18.596 . 17.913 . -0.909 -0.860 3.103 16 . 25749 PTL stop_ loop_ _Chem_comp_bond.ID _Chem_comp_bond.Type _Chem_comp_bond.Value_order _Chem_comp_bond.Atom_ID_1 _Chem_comp_bond.Atom_ID_2 _Chem_comp_bond.Aromatic_flag _Chem_comp_bond.Stereo_config _Chem_comp_bond.Ordinal _Chem_comp_bond.Details _Chem_comp_bond.Entry_ID _Chem_comp_bond.Comp_ID 1 . DOUB C1 O1 no N 1 . 25749 PTL 2 . SING C1 C2 no N 2 . 25749 PTL 3 . SING C1 H1 no N 3 . 25749 PTL 4 . SING C2 C3 no N 4 . 25749 PTL 5 . SING C2 H21 no N 5 . 25749 PTL 6 . SING C2 H22 no N 6 . 25749 PTL 7 . SING C3 C4 no N 7 . 25749 PTL 8 . SING C3 H31 no N 8 . 25749 PTL 9 . SING C3 H32 no N 9 . 25749 PTL 10 . SING C4 C5 no N 10 . 25749 PTL 11 . SING C4 H41 no N 11 . 25749 PTL 12 . SING C4 H42 no N 12 . 25749 PTL 13 . SING C5 H51 no N 13 . 25749 PTL 14 . SING C5 H52 no N 14 . 25749 PTL 15 . SING C5 H53 no N 15 . 25749 PTL stop_ save_ ##################################### # Sample contents and methodology # ##################################### ######################## # Sample description # ######################## save_sample_1 _Sample.Sf_category sample _Sample.Sf_framecode sample_1 _Sample.Entry_ID 25749 _Sample.ID 1 _Sample.Type solution _Sample.Sub_type . _Sample.Details . _Sample.Aggregate_sample_number . _Sample.Solvent_system '90% H2O/10% D2O' _Sample.Preparation_date . _Sample.Preparation_expiration_date . _Sample.Polycrystallization_protocol . _Sample.Single_crystal_protocol . _Sample.Crystal_grow_apparatus . _Sample.Crystal_grow_atmosphere . _Sample.Crystal_grow_details . _Sample.Crystal_grow_method . _Sample.Crystal_grow_method_cit_ID . _Sample.Crystal_grow_pH . _Sample.Crystal_grow_pH_range . _Sample.Crystal_grow_pressure . _Sample.Crystal_grow_pressure_esd . _Sample.Crystal_grow_seeding . _Sample.Crystal_grow_seeding_cit_ID . _Sample.Crystal_grow_temp . _Sample.Crystal_grow_temp_details . _Sample.Crystal_grow_temp_esd . _Sample.Crystal_grow_time . _Sample.Oriented_sample_prep_protocol . _Sample.Lyophilization_cryo_protectant . _Sample.Storage_protocol . loop_ _Sample_component.ID _Sample_component.Mol_common_name _Sample_component.Isotopic_labeling _Sample_component.Assembly_ID _Sample_component.Assembly_label _Sample_component.Entity_ID _Sample_component.Entity_label _Sample_component.Product_ID _Sample_component.Type _Sample_component.Concentration_val _Sample_component.Concentration_val_min _Sample_component.Concentration_val_max _Sample_component.Concentration_val_units _Sample_component.Concentration_val_err _Sample_component.Vendor _Sample_component.Vendor_product_name _Sample_component.Vendor_product_code _Sample_component.Entry_ID _Sample_component.Sample_ID 1 D2O 'natural abundance' . . . . . . 55.5 . . mM . . . . 25749 1 2 H2O 'natural abundance' . . . . . . 55.5 . . mM . . . . 25749 1 3 'entity (C4VG16KRKP)' 'natural abundance' . . 1 $entity . . 1 . . mM . . . . 25749 1 4 TSP 'natural abundance' . . . . . . 0.5 . . mM . . . . 25749 1 stop_ save_ ####################### # Sample conditions # ####################### save_sample_conditions_1 _Sample_condition_list.Sf_category sample_conditions _Sample_condition_list.Sf_framecode sample_conditions_1 _Sample_condition_list.Entry_ID 25749 _Sample_condition_list.ID 1 _Sample_condition_list.Details . loop_ _Sample_condition_variable.Type _Sample_condition_variable.Val _Sample_condition_variable.Val_err _Sample_condition_variable.Val_units _Sample_condition_variable.Entry_ID _Sample_condition_variable.Sample_condition_list_ID 'ionic strength' 0 . mM 25749 1 pH 4.5 . pH 25749 1 pressure 1 . atm 25749 1 temperature 273 . K 25749 1 stop_ save_ ############################ # Computer software used # ############################ save_CYANA _Software.Sf_category software _Software.Sf_framecode CYANA _Software.Entry_ID 25749 _Software.ID 1 _Software.Name CYANA _Software.Version 2.1 _Software.Details . loop_ _Vendor.Name _Vendor.Address _Vendor.Electronic_address _Vendor.Entry_ID _Vendor.Software_ID 'Guntert, Mumenthaler and Wuthrich' . . 25749 1 stop_ loop_ _Task.Task _Task.Entry_ID _Task.Software_ID refinement 25749 1 'structure solution' 25749 1 stop_ save_ ######################### # Experimental detail # ######################### ################################## # NMR Spectrometer definitions # ################################## save_spectrometer_1 _NMR_spectrometer.Sf_category NMR_spectrometer _NMR_spectrometer.Sf_framecode spectrometer_1 _NMR_spectrometer.Entry_ID 25749 _NMR_spectrometer.ID 1 _NMR_spectrometer.Details . _NMR_spectrometer.Manufacturer Bruker _NMR_spectrometer.Model Avance _NMR_spectrometer.Serial_number . _NMR_spectrometer.Field_strength 500 save_ save_NMR_spectrometer_list _NMR_spectrometer_list.Sf_category NMR_spectrometer_list _NMR_spectrometer_list.Sf_framecode NMR_spectrometer_list _NMR_spectrometer_list.Entry_ID 25749 _NMR_spectrometer_list.ID 1 loop_ _NMR_spectrometer_view.ID _NMR_spectrometer_view.Name _NMR_spectrometer_view.Manufacturer _NMR_spectrometer_view.Model _NMR_spectrometer_view.Serial_number _NMR_spectrometer_view.Field_strength _NMR_spectrometer_view.Details _NMR_spectrometer_view.Citation_ID _NMR_spectrometer_view.Citation_label _NMR_spectrometer_view.Entry_ID _NMR_spectrometer_view.NMR_spectrometer_list_ID 1 spectrometer_1 Bruker Avance . 500 . . . 25749 1 stop_ save_ ############################# # NMR applied experiments # ############################# save_experiment_list _Experiment_list.Sf_category experiment_list _Experiment_list.Sf_framecode experiment_list _Experiment_list.Entry_ID 25749 _Experiment_list.ID 1 _Experiment_list.Details . loop_ _Experiment.ID _Experiment.Name _Experiment.Raw_data_flag _Experiment.NMR_spec_expt_ID _Experiment.NMR_spec_expt_label _Experiment.MS_expt_ID _Experiment.MS_expt_label _Experiment.SAXS_expt_ID _Experiment.SAXS_expt_label _Experiment.FRET_expt_ID _Experiment.FRET_expt_label _Experiment.EMR_expt_ID _Experiment.EMR_expt_label _Experiment.Sample_ID _Experiment.Sample_label _Experiment.Sample_state _Experiment.Sample_volume _Experiment.Sample_volume_units _Experiment.Sample_condition_list_ID _Experiment.Sample_condition_list_label _Experiment.Sample_spinning_rate _Experiment.Sample_angle _Experiment.NMR_tube_type _Experiment.NMR_spectrometer_ID _Experiment.NMR_spectrometer_label _Experiment.NMR_spectrometer_probe_ID _Experiment.NMR_spectrometer_probe_label _Experiment.NMR_spectral_processing_ID _Experiment.NMR_spectral_processing_label _Experiment.Mass_spectrometer_ID _Experiment.Mass_spectrometer_label _Experiment.Xray_instrument_ID _Experiment.Xray_instrument_label _Experiment.Fluorescence_instrument_ID _Experiment.Fluorescence_instrument_label _Experiment.EMR_instrument_ID _Experiment.EMR_instrument_label _Experiment.Chromatographic_system_ID _Experiment.Chromatographic_system_label _Experiment.Chromatographic_column_ID _Experiment.Chromatographic_column_label _Experiment.Entry_ID _Experiment.Experiment_list_ID 1 '2D 1H-1H TOCSY' no . . . . . . . . . . 1 $sample_1 isotropic . . 1 $sample_conditions_1 . . . 1 $spectrometer_1 . . . . . . . . . . . . . . . . 25749 1 2 '2D 1H-1H trNOESY' no . . . . . . . . . . 1 $sample_1 isotropic . . 1 $sample_conditions_1 . . . 1 $spectrometer_1 . . . . . . . . . . . . . . . . 25749 1 stop_ save_ #################### # NMR parameters # #################### ############################## # Assigned chemical shifts # ############################## ################################ # Chemical shift referencing # ################################ save_chemical_shift_reference_1 _Chem_shift_reference.Sf_category chem_shift_reference _Chem_shift_reference.Sf_framecode chemical_shift_reference_1 _Chem_shift_reference.Entry_ID 25749 _Chem_shift_reference.ID 1 _Chem_shift_reference.Details . loop_ _Chem_shift_ref.Atom_type _Chem_shift_ref.Atom_isotope_number _Chem_shift_ref.Mol_common_name _Chem_shift_ref.Atom_group _Chem_shift_ref.Concentration_val _Chem_shift_ref.Concentration_units _Chem_shift_ref.Solvent _Chem_shift_ref.Rank _Chem_shift_ref.Chem_shift_units _Chem_shift_ref.Chem_shift_val _Chem_shift_ref.Ref_method _Chem_shift_ref.Ref_type _Chem_shift_ref.Indirect_shift_ratio _Chem_shift_ref.External_ref_loc _Chem_shift_ref.External_ref_sample_geometry _Chem_shift_ref.External_ref_axis _Chem_shift_ref.Indirect_shift_ratio_cit_ID _Chem_shift_ref.Indirect_shift_ratio_cit_label _Chem_shift_ref.Ref_correction_type _Chem_shift_ref.Correction_val _Chem_shift_ref.Correction_val_cit_ID _Chem_shift_ref.Correction_val_cit_label _Chem_shift_ref.Entry_ID _Chem_shift_ref.Chem_shift_reference_ID H 1 TSP 'methyl protons' . . . . ppm 0 internal direct 1 . . . . . . . . . 25749 1 stop_ save_ ################################### # Assigned chemical shift lists # ################################### ################################################################### # Chemical Shift Ambiguity Index Value Definitions # # # # The values other than 1 are used for those atoms with different # # chemical shifts that cannot be assigned to stereospecific atoms # # or to specific residues or chains. # # # # Index Value Definition # # # # 1 Unique (including isolated methyl protons, # # geminal atoms, and geminal methyl # # groups with identical chemical shifts) # # (e.g. ILE HD11, HD12, HD13 protons) # # 2 Ambiguity of geminal atoms or geminal methyl # # proton groups (e.g. ASP HB2 and HB3 # # protons, LEU CD1 and CD2 carbons, or # # LEU HD11, HD12, HD13 and HD21, HD22, # # HD23 methyl protons) # # 3 Aromatic atoms on opposite sides of # # symmetrical rings (e.g. TYR HE1 and HE2 # # protons) # # 4 Intraresidue ambiguities (e.g. LYS HG and # # HD protons or TRP HZ2 and HZ3 protons) # # 5 Interresidue ambiguities (LYS 12 vs. LYS 27) # # 6 Intermolecular ambiguities (e.g. ASP 31 CA # # in monomer 1 and ASP 31 CA in monomer 2 # # of an asymmetrical homodimer, duplex # # DNA assignments, or other assignments # # that may apply to atoms in one or more # # molecule in the molecular assembly) # # 9 Ambiguous, specific ambiguity not defined # # # ################################################################### save_assigned_chem_shift_list_1 _Assigned_chem_shift_list.Sf_category assigned_chemical_shifts _Assigned_chem_shift_list.Sf_framecode assigned_chem_shift_list_1 _Assigned_chem_shift_list.Entry_ID 25749 _Assigned_chem_shift_list.ID 1 _Assigned_chem_shift_list.Sample_condition_list_ID 1 _Assigned_chem_shift_list.Sample_condition_list_label $sample_conditions_1 _Assigned_chem_shift_list.Chem_shift_reference_ID 1 _Assigned_chem_shift_list.Chem_shift_reference_label $chemical_shift_reference_1 _Assigned_chem_shift_list.Chem_shift_1H_err . _Assigned_chem_shift_list.Chem_shift_13C_err . _Assigned_chem_shift_list.Chem_shift_15N_err . _Assigned_chem_shift_list.Chem_shift_31P_err . _Assigned_chem_shift_list.Chem_shift_2H_err . _Assigned_chem_shift_list.Chem_shift_19F_err . _Assigned_chem_shift_list.Error_derivation_method . _Assigned_chem_shift_list.Details . _Assigned_chem_shift_list.Text_data_format . _Assigned_chem_shift_list.Text_data . loop_ _Chem_shift_experiment.Experiment_ID _Chem_shift_experiment.Experiment_name _Chem_shift_experiment.Sample_ID _Chem_shift_experiment.Sample_label _Chem_shift_experiment.Sample_state _Chem_shift_experiment.Entry_ID _Chem_shift_experiment.Assigned_chem_shift_list_ID 1 '2D 1H-1H TOCSY' . . . 25749 1 2 '2D 1H-1H trNOESY' . . . 25749 1 stop_ loop_ _Atom_chem_shift.ID _Atom_chem_shift.Assembly_atom_ID _Atom_chem_shift.Entity_assembly_ID _Atom_chem_shift.Entity_ID _Atom_chem_shift.Comp_index_ID _Atom_chem_shift.Seq_ID _Atom_chem_shift.Comp_ID _Atom_chem_shift.Atom_ID _Atom_chem_shift.Atom_type _Atom_chem_shift.Atom_isotope_number _Atom_chem_shift.Val _Atom_chem_shift.Val_err _Atom_chem_shift.Assign_fig_of_merit _Atom_chem_shift.Ambiguity_code _Atom_chem_shift.Occupancy _Atom_chem_shift.Resonance_ID _Atom_chem_shift.Auth_entity_assembly_ID _Atom_chem_shift.Auth_asym_ID _Atom_chem_shift.Auth_seq_ID _Atom_chem_shift.Auth_comp_ID _Atom_chem_shift.Auth_atom_ID _Atom_chem_shift.Details _Atom_chem_shift.Entry_ID _Atom_chem_shift.Assigned_chem_shift_list_ID 1 . 1 1 2 2 VAL HB H 1 2.009 0.008 . 1 . . . A 2 VAL HB . 25749 1 2 . 1 1 2 2 VAL HG11 H 1 0.976 -0.035 . 2 . . . A 2 VAL HG11 . 25749 1 3 . 1 1 2 2 VAL HG12 H 1 0.976 -0.035 . 2 . . . A 2 VAL HG12 . 25749 1 4 . 1 1 2 2 VAL HG13 H 1 0.976 -0.035 . 2 . . . A 2 VAL HG13 . 25749 1 5 . 1 1 2 2 VAL HG21 H 1 0.976 -0.035 . 2 . . . A 2 VAL HG21 . 25749 1 6 . 1 1 2 2 VAL HG22 H 1 0.976 -0.035 . 2 . . . A 2 VAL HG22 . 25749 1 7 . 1 1 2 2 VAL HG23 H 1 0.976 -0.035 . 2 . . . A 2 VAL HG23 . 25749 1 8 . 1 1 3 3 ALA H H 1 8.343 -0.035 . 1 . . . A 3 ALA H . 25749 1 9 . 1 1 3 3 ALA HA H 1 4.276 0.002 . 1 . . . A 3 ALA HA . 25749 1 10 . 1 1 3 3 ALA HB1 H 1 1.390 0.008 . 1 . . . A 3 ALA HB1 . 25749 1 11 . 1 1 3 3 ALA HB2 H 1 1.390 0.008 . 1 . . . A 3 ALA HB2 . 25749 1 12 . 1 1 3 3 ALA HB3 H 1 1.390 0.008 . 1 . . . A 3 ALA HB3 . 25749 1 13 . 1 1 4 4 ARG H H 1 8.243 0.003 . 1 . . . A 4 ARG H . 25749 1 14 . 1 1 4 4 ARG HA H 1 4.263 0.011 . 1 . . . A 4 ARG HA . 25749 1 15 . 1 1 4 4 ARG HB2 H 1 1.609 -0.005 . 2 . . . A 4 ARG HB2 . 25749 1 16 . 1 1 4 4 ARG HB3 H 1 1.609 -0.005 . 2 . . . A 4 ARG HB3 . 25749 1 17 . 1 1 4 4 ARG HG2 H 1 1.721 -0.002 . 2 . . . A 4 ARG HG2 . 25749 1 18 . 1 1 4 4 ARG HG3 H 1 1.721 -0.002 . 2 . . . A 4 ARG HG3 . 25749 1 19 . 1 1 4 4 ARG HD2 H 1 3.164 +0.007 . 2 . . . A 4 ARG HD2 . 25749 1 20 . 1 1 4 4 ARG HD3 H 1 3.164 +0.007 . 2 . . . A 4 ARG HD3 . 25749 1 21 . 1 1 5 5 GLY H H 1 8.369 0.007 . 1 . . . A 5 GLY H . 25749 1 22 . 1 1 5 5 GLY HA2 H 1 3.922 -0.019 . 2 . . . A 5 GLY HA2 . 25749 1 23 . 1 1 5 5 GLY HA3 H 1 3.922 -0.019 . 2 . . . A 5 GLY HA3 . 25749 1 24 . 1 1 6 6 TRP H H 1 7.941 -0.006 . 1 . . . A 6 TRP H . 25749 1 25 . 1 1 6 6 TRP HA H 1 4.618 0.003 . 1 . . . A 6 TRP HA . 25749 1 26 . 1 1 6 6 TRP HB2 H 1 3.265 0.002 . 2 . . . A 6 TRP HB2 . 25749 1 27 . 1 1 6 6 TRP HB3 H 1 3.265 0.002 . 2 . . . A 6 TRP HB3 . 25749 1 28 . 1 1 6 6 TRP HD1 H 1 7.238 0.010 . 1 . . . A 6 TRP HD1 . 25749 1 29 . 1 1 6 6 TRP HE1 H 1 10.13 0.018 . 1 . . . A 6 TRP HE1 . 25749 1 30 . 1 1 6 6 TRP HE3 H 1 7.577 0.004 . 1 . . . A 6 TRP HE3 . 25749 1 31 . 1 1 6 6 TRP HZ2 H 1 7.561 0.008 . 1 . . . A 6 TRP HZ2 . 25749 1 32 . 1 1 6 6 TRP HZ3 H 1 7.140 0.002 . 1 . . . A 6 TRP HZ3 . 25749 1 33 . 1 1 6 6 TRP HH2 H 1 7.218 0.012 . 1 . . . A 6 TRP HH2 . 25749 1 34 . 1 1 7 7 LYS H H 1 8.024 0.002 . 1 . . . A 7 LYS H . 25749 1 35 . 1 1 7 7 LYS HA H 1 4.160 0.004 . 1 . . . A 7 LYS HA . 25749 1 36 . 1 1 7 7 LYS HB2 H 1 1.689 0.001 . 2 . . . A 7 LYS HB2 . 25749 1 37 . 1 1 7 7 LYS HB3 H 1 1.689 0.001 . 2 . . . A 7 LYS HB3 . 25749 1 38 . 1 1 7 7 LYS HG2 H 1 1.229 -0.003 . 2 . . . A 7 LYS HG2 . 25749 1 39 . 1 1 7 7 LYS HG3 H 1 1.229 -0.003 . 2 . . . A 7 LYS HG3 . 25749 1 40 . 1 1 7 7 LYS HD2 H 1 1.576 -0.004 . 2 . . . A 7 LYS HD2 . 25749 1 41 . 1 1 7 7 LYS HD3 H 1 1.576 -0.004 . 2 . . . A 7 LYS HD3 . 25749 1 42 . 1 1 8 8 ARG H H 1 8.072 0.004 . 1 . . . A 8 ARG H . 25749 1 43 . 1 1 8 8 ARG HA H 1 4.129 0.005 . 1 . . . A 8 ARG HA . 25749 1 44 . 1 1 8 8 ARG HB2 H 1 1.703 0.003 . 2 . . . A 8 ARG HB2 . 25749 1 45 . 1 1 8 8 ARG HB3 H 1 1.703 0.003 . 2 . . . A 8 ARG HB3 . 25749 1 46 . 1 1 8 8 ARG HG2 H 1 1.589 0.001 . 2 . . . A 8 ARG HG2 . 25749 1 47 . 1 1 8 8 ARG HG3 H 1 1.589 0.001 . 2 . . . A 8 ARG HG3 . 25749 1 48 . 1 1 9 9 LYS H H 1 8.406 0.004 . 1 . . . A 9 LYS H . 25749 1 49 . 1 1 9 9 LYS HA H 1 4.268 0.003 . 1 . . . A 9 LYS HA . 25749 1 50 . 1 1 9 9 LYS HB2 H 1 1.768 0.002 . 2 . . . A 9 LYS HB2 . 25749 1 51 . 1 1 9 9 LYS HB3 H 1 1.768 0.002 . 2 . . . A 9 LYS HB3 . 25749 1 52 . 1 1 9 9 LYS HG2 H 1 1.401 0.005 . 2 . . . A 9 LYS HG2 . 25749 1 53 . 1 1 9 9 LYS HG3 H 1 1.401 0.005 . 2 . . . A 9 LYS HG3 . 25749 1 54 . 1 1 9 9 LYS HD2 H 1 1.665 0.002 . 2 . . . A 9 LYS HD2 . 25749 1 55 . 1 1 9 9 LYS HD3 H 1 1.665 0.002 . 2 . . . A 9 LYS HD3 . 25749 1 56 . 1 1 10 10 CYS H H 1 8.344 0.003 . 1 . . . A 10 CYS H . 25749 1 57 . 1 1 10 10 CYS HA H 1 4.783 0.004 . 1 . . . A 10 CYS HA . 25749 1 58 . 1 1 10 10 CYS HB2 H 1 2.877 0.003 . 1 . . . A 10 CYS HB2 . 25749 1 59 . 1 1 10 10 CYS HB3 H 1 2.877 0.003 . 1 . . . A 10 CYS HB3 . 25749 1 60 . 1 1 11 11 PRO HB2 H 1 1.982 0.003 . 1 . . . A 11 PRO HB2 . 25749 1 61 . 1 1 11 11 PRO HB3 H 1 2.211 0.001 . 1 . . . A 11 PRO HB3 . 25749 1 62 . 1 1 11 11 PRO HD2 H 1 3.747 0.002 . 2 . . . A 11 PRO HD2 . 25749 1 63 . 1 1 11 11 PRO HD3 H 1 3.747 0.002 . 2 . . . A 11 PRO HD3 . 25749 1 64 . 1 1 12 12 LEU H H 1 8.171 0.002 . 1 . . . A 12 LEU H . 25749 1 65 . 1 1 12 12 LEU HA H 1 4.247 0.003 . 1 . . . A 12 LEU HA . 25749 1 66 . 1 1 12 12 LEU HB2 H 1 1.526 0.002 . 2 . . . A 12 LEU HB2 . 25749 1 67 . 1 1 12 12 LEU HB3 H 1 1.526 0.002 . 2 . . . A 12 LEU HB3 . 25749 1 68 . 1 1 12 12 LEU HG H 1 1.435 0.003 . 1 . . . A 12 LEU HG . 25749 1 69 . 1 1 12 12 LEU HD11 H 1 0.850 0.001 . 2 . . . A 12 LEU HD11 . 25749 1 70 . 1 1 12 12 LEU HD12 H 1 0.850 0.001 . 2 . . . A 12 LEU HD12 . 25749 1 71 . 1 1 12 12 LEU HD13 H 1 0.850 0.001 . 2 . . . A 12 LEU HD13 . 25749 1 72 . 1 1 12 12 LEU HD21 H 1 0.850 0.001 . 2 . . . A 12 LEU HD21 . 25749 1 73 . 1 1 12 12 LEU HD22 H 1 0.850 0.001 . 2 . . . A 12 LEU HD22 . 25749 1 74 . 1 1 12 12 LEU HD23 H 1 0.850 0.001 . 2 . . . A 12 LEU HD23 . 25749 1 75 . 1 1 13 13 PHE H H 1 8.170 0.002 . 1 . . . A 13 PHE H . 25749 1 76 . 1 1 13 13 PHE HA H 1 4.610 0.002 . 1 . . . A 13 PHE HA . 25749 1 77 . 1 1 13 13 PHE HB2 H 1 3.166 0.002 . 1 . . . A 13 PHE HB2 . 25749 1 78 . 1 1 13 13 PHE HB3 H 1 3.056 0.002 . 1 . . . A 13 PHE HB3 . 25749 1 79 . 1 1 13 13 PHE HD1 H 1 7.258 0.002 . 3 . . . A 13 PHE HD1 . 25749 1 80 . 1 1 13 13 PHE HD2 H 1 7.258 0.002 . 3 . . . A 13 PHE HD2 . 25749 1 81 . 1 1 13 13 PHE HE1 H 1 7.356 0.002 . 3 . . . A 13 PHE HE1 . 25749 1 82 . 1 1 13 13 PHE HE2 H 1 7.356 0.002 . 3 . . . A 13 PHE HE2 . 25749 1 83 . 1 1 14 14 GLY H H 1 8.301 0.004 . 1 . . . A 14 GLY H . 25749 1 84 . 1 1 14 14 GLY HA2 H 1 3.910 0.002 . 2 . . . A 14 GLY HA2 . 25749 1 85 . 1 1 14 14 GLY HA3 H 1 3.910 0.002 . 2 . . . A 14 GLY HA3 . 25749 1 86 . 1 1 15 15 LYS H H 1 8.187 0.003 . 1 . . . A 15 LYS H . 25749 1 87 . 1 1 15 15 LYS HA H 1 4.375 0.002 . 1 . . . A 15 LYS HA . 25749 1 88 . 1 1 15 15 LYS HB2 H 1 1.897 0.001 . 2 . . . A 15 LYS HB2 . 25749 1 89 . 1 1 15 15 LYS HB3 H 1 1.897 0.001 . 2 . . . A 15 LYS HB3 . 25749 1 90 . 1 1 15 15 LYS HG2 H 1 1.424 0.002 . 2 . . . A 15 LYS HG2 . 25749 1 91 . 1 1 15 15 LYS HG3 H 1 1.424 0.002 . 2 . . . A 15 LYS HG3 . 25749 1 92 . 1 1 15 15 LYS HD2 H 1 1.778 0.002 . 2 . . . A 15 LYS HD2 . 25749 1 93 . 1 1 15 15 LYS HD3 H 1 1.778 0.002 . 2 . . . A 15 LYS HD3 . 25749 1 94 . 1 1 15 15 LYS HE2 H 1 2.987 0.002 . 2 . . . A 15 LYS HE2 . 25749 1 95 . 1 1 15 15 LYS HE3 H 1 2.987 0.002 . 2 . . . A 15 LYS HE3 . 25749 1 96 . 1 1 16 16 GLY H H 1 8.487 0.003 . 1 . . . A 16 GLY H . 25749 1 97 . 1 1 16 16 GLY HA2 H 1 3.965 0.002 . 2 . . . A 16 GLY HA2 . 25749 1 98 . 1 1 16 16 GLY HA3 H 1 3.965 0.002 . 2 . . . A 16 GLY HA3 . 25749 1 99 . 1 1 17 17 GLY H H 1 7.921 0.003 . 1 . . . A 17 GLY H . 25749 1 100 . 1 1 17 17 GLY HA2 H 1 3.759 0.002 . 2 . . . A 17 GLY HA2 . 25749 1 101 . 1 1 17 17 GLY HA3 H 1 3.759 0.002 . 2 . . . A 17 GLY HA3 . 25749 1 stop_ save_