| NMR-STAR tag name | _Entity_natural_src.ID |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.ID An integer value that uniquely identifies the natural source provided. |
| Database field name | EntityNaturalSrcID |
| SQL Database type | INTEGER |
| Part of primary Key | yes |
| Foreign Key on table, column | , |
| Saveframe ID | yes: This tag contains the identifier for this saveframe in the entry. |
| Row Index | yes: This tag contains the index of this row in the loop, which is used when the data is loaded into a database which has a relational model in which ordering doesn't matter |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | yes |
| Prompt | Natural source list ID |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Entity_ID |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Entity_ID Pointer to '_Entity.ID' |
| Database field name | EntityID |
| SQL Database type | INTEGER |
| Part of primary Key | no |
| Foreign Key on table, column | Entity, ID |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | yes |
| Prompt | Entity ID |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Entity_label |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Entity_label This is the label assigned to the molecular entity by the author when completing the molecular entity portion of the deposition. A selection can be made from the pulled down menu that should contain a list of the names assigned to molecular entities in the section where each molecular entity is described. |
| Database field name | EntityLabel |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | Entity, Sf_framecode |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | yes |
| Prompt | Label assigned to the molecular entity |
| Examples | lysozyme |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Entity_chimera_segment_ID |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Entity_chimera_segment_ID Pointer to '_Entity_chimera_segment.ID' |
| Database field name | EntityChimeraSegmentID |
| SQL Database type | INTEGER |
| Part of primary Key | no |
| Foreign Key on table, column | Entity_chimera_segment, ID |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Entity chimera segment ID |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.NCBI_taxonomy_ID |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.NCBI_taxonomy_ID After entering an NCBI taxonomy ID, click on the save button and no additional information will need to be entered. NCBI taxonomy IDs can be obtained from the NCBI Taxonomy Browser. |
| Database field name | NCBITaxonomyID |
| SQL Database type | CHAR(12) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | yes |
| Prompt | NCBI Taxonomy ID (If available, all that is needed.) |
| Examples | 9606 |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Type |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Type Enter the type of natural source for the biopolymers studied. In most cases, an organism will be the natural source. For chimeric polymers with fragments obtained from more than one natural source, create additional columns and enter the names of all applicable natural sources. |
| Database field name | Type |
| SQL Database type | VARCHAR(31) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Enumerations | [click for a list of enumerations] This is an open enumeration. The list of values are only suggestions. They are not enforced. |
| Prompt | Type of natural source |
| Examples | organism |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Common |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Common The molecular entity of biopolymer is common to more than one natural source. |
| Database field name | Common |
| SQL Database type | VARCHAR(3) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Enumerations | [click for a list of enumerations] This is a closed enumeration. The list of values are the only ones allowed. |
| Prompt | Many natural sources |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Organism_name_scientific |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Organism_name_scientific Scientific name for the organism. Usually a combination of the genus and species for the organism. |
| Database field name | OrganismNameScientific |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Enumerations | [click for a list of enumerations] This is an open enumeration. The list of values are only suggestions. They are not enforced. |
| Prompt | Scientific name for the natural source (i.e., genus and species) |
| Examples | Homo sapiens |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Organism_name_common |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Organism_name_common Common name used for the biological organism. |
| Database field name | OrganismNameCommon |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | yes |
| Prompt | Common name for the organism |
| Examples | baker's yeast |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Organism_acronym |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Organism_acronym A common acronym used to identify the organism. |
| Database field name | OrganismAcronym |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Organism acronym |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.ICTVdb_decimal_code |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.ICTVdb_decimal_code ICTV database decimal code for a virus |
| Database field name | ICTVdbDecimalCode |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | ICTVdb decimal code |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Superkingdom |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Superkingdom Scientific superkingdom classification for an organism as defined by NCBI taxonomists. |
| Database field name | Superkingdom |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | yes |
| Enumerations | [click for a list of enumerations] This is an open enumeration. The list of values are only suggestions. They are not enforced. |
| Prompt | Superkingdom |
| Examples | Eukaryota |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Kingdom |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Kingdom Kingdom classifications for an organism as defined by NCBI taxonomists. |
| Database field name | Kingdom |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | yes |
| Enumerations | [click for a list of enumerations] This is an open enumeration. The list of values are only suggestions. They are not enforced. |
| Prompt | Kingdom |
| Examples | Metazoa |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Genus |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Genus Genus for the natural organism |
| Database field name | Genus |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | yes |
| Prompt | Genus |
| Examples | Saccharomyces |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Species |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Species Scientific name for the species of the organism as defined by NCBI taxonomists whenever possible. |
| Database field name | Species |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | yes |
| Prompt | Species |
| Examples | cerevisiae |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Strain |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Strain The strain of the natural organism from which the gene was obtained, if relevant. |
| Database field name | Strain |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Strain |
| Examples | gm3c2; BH10 isolate |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Variant |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Variant Name used to classify the variant of an organism. |
| Database field name | Variant |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Variant |
| Examples | BRU isolate |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Subvariant |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Subvariant Name used to define a subvariant of an organism. |
| Database field name | Subvariant |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Subvariant |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Organ |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Organ The organ of a higher organism where the biopolymer is found in nature. |
| Database field name | Organ |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Enumerations | [click for a list of enumerations] This is an open enumeration. The list of values are only suggestions. They are not enforced. |
| Prompt | Organ |
| Examples | pancreas |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Tissue |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Tissue The tissue from an organism that is the natural or experimental source of the molecule. |
| Database field name | Tissue |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Enumerations | [click for a list of enumerations] This is an open enumeration. The list of values are only suggestions. They are not enforced. |
| Prompt | Tissue |
| Examples | muscle |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Tissue_fraction |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Tissue_fraction The fraction of the tissue that was used as the source of the molecular entity. |
| Database field name | TissueFraction |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Tissue fraction |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Cell_line |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Cell_line Name the specific line of cells used in the experiment. |
| Database field name | CellLine |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Cell line |
| Examples | 4-4-20 murine-murine hybridoma |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Cell_type |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Cell_type Identify the particular kind of cell. |
| Database field name | CellType |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Cell type |
| Examples | B-lymphocyte |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.ATCC_number |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.ATCC_number Organism culture number defined in the American Type Culture Collection. |
| Database field name | ATCCNumber |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | ATCC number |
| Examples | 27355 |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Organelle |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Organelle Organized structure within a cell. |
| Database field name | Organelle |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Enumerations | [click for a list of enumerations] This is an open enumeration. The list of values are only suggestions. They are not enforced. |
| Prompt | Organelle |
| Examples | mitochondria |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Cellular_location |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Cellular_location The cellular location where the molecular entity is found with in the natural source for the molecular entity. |
| Database field name | CellularLocation |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Cellular location |
| Examples | cytoplasm |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Fragment |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Fragment A domain or fragment of the molecule. |
| Database field name | Fragment |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Fragment |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Fraction |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Fraction Indicate cellular location here such as cytoplasm periplasm extracellular etc. |
| Database field name | Fraction |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Fraction |
| Examples | cytoplasm |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Secretion |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Secretion If the molecule was isolated from a particular secretion such as saliva urine or venom this is stated here. |
| Database field name | Secretion |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Enumerations | [click for a list of enumerations] This is an open enumeration. The list of values are only suggestions. They are not enforced. |
| Prompt | Secretion |
| Examples | venom |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Plasmid |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Plasmid The name for a plasmid that naturally contains the gene for the biopolymer. |
| Database field name | Plasmid |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Plasmid (if natural source) |
| Examples | PPED5-399 |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Plasmid_details |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Plasmid_details Text details describing the plasmid that is the natural source for the molecular entity. |
| Database field name | PlasmidDetails |
| SQL Database type | TEXT |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Plasmid details |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Gene_mnemonic |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Gene_mnemonic The name of the gene which codes the protein in the organism from which the protein originates. |
| Database field name | GeneMnemonic |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Gene name |
| Examples | tmoC |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Dev_stage |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Dev_stage For molecular entities that are present in an organism only at a define stage in the development of the organism, the stage they are present. |
| Database field name | DevStage |
| SQL Database type | TEXT |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Development stage details |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Details |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Details Give any other remarks or comments on the biological source which may be relevant. |
| Database field name | Details |
| SQL Database type | TEXT |
| Part of primary Key | no |
| Foreign Key on table, column | , |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Details |
| Examples | German collection of microorganisms (DSM) |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Citation_ID |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Citation_ID Pointer to '_Citation.ID' |
| Database field name | CitationID |
| SQL Database type | INTEGER |
| Part of primary Key | no |
| Foreign Key on table, column | Citation, ID |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Citation ID |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Citation_label |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Citation_label Pointer to a saveframe of the category citation. |
| Database field name | CitationLabel |
| SQL Database type | VARCHAR(127) |
| Part of primary Key | no |
| Foreign Key on table, column | Citation, Sf_framecode |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | no |
| Prompt | Citation label |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Sf_ID |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Sf_ID Pointer to '_Entity_natural_src_list.Sf_ID' |
| Database field name | SfID |
| SQL Database type | INTEGER |
| Part of primary Key | no |
| Foreign Key on table, column | Entity_natural_src_list, Sf_ID |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | yes This field's data is for internal use only and should be hidden in public versiond of the data. |
| Nulls allowed in database? | yes |
| Prompt | Sf ID |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Entry_ID |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Entry_ID Pointer to '_Entry.ID' |
| Database field name | EntryID |
| SQL Database type | CHAR(12) |
| Part of primary Key | yes |
| Foreign Key on table, column | Entry, ID |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | yes |
| Prompt | Entry ID |
| Examples | ? |
| Help text |
| NMR-STAR tag name | _Entity_natural_src.Entity_natural_src_list_ID |
|---|---|
| Description | NMR-STAR name: _Entity_natural_src.Entity_natural_src_list_ID Pointer to '_Entity_natural_src_list.ID' |
| Database field name | EntityNaturalSrcListID |
| SQL Database type | INTEGER |
| Part of primary Key | yes |
| Foreign Key on table, column | Entity_natural_src_list, ID |
| Saveframe ID | no |
| Row Index | no |
| Secondary Index | no |
| Internal Flag | no |
| Nulls allowed in database? | yes |
| Prompt | Entity natural src list ID |
| Examples | ? |
| Help text |