NMR-STAR dictionary: detail of LocalStructureQuality table

NMR-STAR dictionary: database table: LocalStructureQuality

Detailed description of the fields

_Local_structure_quality.ID (LocalStructureQualityID)

(go to parent tag category listing)

NMR-STAR tag name	_Local_structure_quality.ID
Description	NMR-STAR name: _Local_structure_quality.ID A numeric identifier for the segment of a molecule for which a quality value is reported.
Database field name	LocalStructureQualityID
SQL Database type	INTEGER
Part of primary Key	yes
Foreign Key on table, column	,
Saveframe ID	yes: This tag contains the identifier for this saveframe in the entry.
Row Index	yes: This tag contains the index of this row in the loop, which is used when the data is loaded into a database which has a relational model in which ordering doesn't matter
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	ID
Examples	?
Help text

_Local_structure_quality.Type (Type)

(go to parent tag category listing)

NMR-STAR tag name	_Local_structure_quality.Type
Description	NMR-STAR name: _Local_structure_quality.Type Select a value from the pull down list that best describes the quality of structural conformation observed for this segment of the biopolymer. If an appropriate value is not available from the list, please enter a very brief descriptor of your own choosing.
Database field name	Type
SQL Database type	VARCHAR(255)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Enumerations	[click for a list of enumerations] This is an open enumeration. The list of values are only suggestions. They are not enforced.
Prompt	Quality description for the molecule segment
Examples	not well defined
Help text

_Local_structure_quality.Entity_assembly_ID (EntityAssemblyID)

(go to parent tag category listing)

NMR-STAR tag name	_Local_structure_quality.Entity_assembly_ID
Description	NMR-STAR name: _Local_structure_quality.Entity_assembly_ID ?
Database field name	EntityAssemblyID
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Entity_assembly, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Entity assembly ID
Examples	1
Help text

_Local_structure_quality.Asym_ID (AsymID)

(go to parent tag category listing)

NMR-STAR tag name	_Local_structure_quality.Asym_ID
Description	NMR-STAR name: _Local_structure_quality.Asym_ID Enter the chain ID for the biopolymer of the segment for which a quality description is being provided.
Database field name	AsymID
SQL Database type	CHAR(12)
Part of primary Key	no
Foreign Key on table, column	Struct_asym, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Molecule chain ID
Examples	A
Help text

_Local_structure_quality.Entity_ID (EntityID)

(go to parent tag category listing)

NMR-STAR tag name	_Local_structure_quality.Entity_ID
Description	NMR-STAR name: _Local_structure_quality.Entity_ID Pointer to '_Entity.ID'
Database field name	EntityID
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Entity, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Entity ID
Examples	1
Help text

_Local_structure_quality.Entity_label (EntityLabel)

(go to parent tag category listing)

NMR-STAR tag name	_Local_structure_quality.Entity_label
Description	NMR-STAR name: _Local_structure_quality.Entity_label Name of the biopolymer where the segment is located.
Database field name	EntityLabel
SQL Database type	VARCHAR(127)
Part of primary Key	no
Foreign Key on table, column	Entity, Sf_framecode
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Molecule name
Examples	ubiquitin
Help text

_Local_structure_quality.Comp_index_ID_begin (CompIndexIDBegin)

(go to parent tag category listing)

NMR-STAR tag name	_Local_structure_quality.Comp_index_ID_begin
Description	NMR-STAR name: _Local_structure_quality.Comp_index_ID_begin The starting sequence position for the segment that is being described.
Database field name	CompIndexIDBegin
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Entity_comp_index, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Segment starting sequence position
Examples	46
Help text

_Local_structure_quality.Comp_index_ID_end (CompIndexIDEnd)

(go to parent tag category listing)

NMR-STAR tag name	_Local_structure_quality.Comp_index_ID_end
Description	NMR-STAR name: _Local_structure_quality.Comp_index_ID_end The ending sequence position for the segment that is being described.
Database field name	CompIndexIDEnd
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Entity_comp_index, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Segment ending sequence position
Examples	52
Help text

_Local_structure_quality.Sf_ID (SfID)

(go to parent tag category listing)

NMR-STAR tag name	_Local_structure_quality.Sf_ID
Description	NMR-STAR name: _Local_structure_quality.Sf_ID ?
Database field name	SfID
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Conformer_family_coord_set, Sf_ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Sf ID
Examples	?
Help text

_Local_structure_quality.Entry_ID (EntryID)

(go to parent tag category listing)

NMR-STAR tag name	_Local_structure_quality.Entry_ID
Description	NMR-STAR name: _Local_structure_quality.Entry_ID ?
Database field name	EntryID
SQL Database type	CHAR(12)
Part of primary Key	yes
Foreign Key on table, column	Entry, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Entry ID
Examples	?
Help text

_Local_structure_quality.Conformer_family_coord_set_ID (ConformerFamilyCoordSetID)

(go to parent tag category listing)

NMR-STAR tag name	_Local_structure_quality.Conformer_family_coord_set_ID
Description	NMR-STAR name: _Local_structure_quality.Conformer_family_coord_set_ID ?
Database field name	ConformerFamilyCoordSetID
SQL Database type	INTEGER
Part of primary Key	yes
Foreign Key on table, column	Conformer_family_coord_set, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Conformer family coord set ID
Examples	?
Help text