NMR-STAR dictionary: detail of PDBXPolySeqScheme table

NMR-STAR dictionary: database table: PDBXPolySeqScheme

Detailed description of the fields

_PDBX_poly_seq_scheme.Entity_assembly_ID (EntityAssemblyID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Entity_assembly_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Entity_assembly_ID Pointer to '_Entity_assembly.ID'
Database field name	EntityAssemblyID
SQL Database type	INTEGER
Part of primary Key	yes
Foreign Key on table, column	Entity_assembly, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Entity assembly ID
Examples	?
Help text

_PDBX_poly_seq_scheme.Entity_ID (EntityID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Entity_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Entity_ID Pointer to '_Entity.ID'
Database field name	EntityID
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Entity, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Entity ID
Examples	?
Help text

_PDBX_poly_seq_scheme.Comp_index_ID (CompIndexID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Comp_index_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Comp_index_ID Pointer to '_Entity_comp_index.ID'
Database field name	CompIndexID
SQL Database type	INTEGER
Part of primary Key	yes
Foreign Key on table, column	Entity_comp_index, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Comp index ID
Examples	?
Help text

_PDBX_poly_seq_scheme.Comp_ID (CompID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Comp_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Comp_ID Pointer to '_Chem_comp.ID'
Database field name	CompID
SQL Database type	CHAR(12)
Part of primary Key	no
Foreign Key on table, column	Chem_comp, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Comp ID
Examples	?
Help text

_PDBX_poly_seq_scheme.Comp_label (CompLabel)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Comp_label
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Comp_label Pointer to a saveframe of the category chem_comp.
Database field name	CompLabel
SQL Database type	VARCHAR(127)
Part of primary Key	no
Foreign Key on table, column	Chem_comp, Sf_framecode
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Chem comp label
Examples	?
Help text

_PDBX_poly_seq_scheme.Asym_ID (AsymID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Asym_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Asym_ID Pointer to '_Struct_asym.ID'
Database field name	AsymID
SQL Database type	CHAR(12)
Part of primary Key	no
Foreign Key on table, column	Struct_asym, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Asym ID
Examples	1;A:2B3
Help text

_PDBX_poly_seq_scheme.Seq_ID (SeqID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Seq_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Seq_ID Pointer to '_Entity_poly_seq.Num'.
Database field name	SeqID
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Entity_poly_seq, Num
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Seq ID
Examples	?
Help text

_PDBX_poly_seq_scheme.Mon_ID (MonID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Mon_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Mon_ID Pointer to '_Entity_poly_seq.Mon_ID'
Database field name	MonID
SQL Database type	CHAR(12)
Part of primary Key	no
Foreign Key on table, column	Entity_poly_seq, Mon_ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Mon ID
Examples	?
Help text

_PDBX_poly_seq_scheme.Hetero (Hetero)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Hetero
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Hetero Flag indicating if the sequence is heterogeneous at the position.
Database field name	Hetero
SQL Database type	VARCHAR(3)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Enumerations	[click for a list of enumerations] This is a closed enumeration. The list of values are the only ones allowed.
Prompt	Hetero
Examples	no
Help text

_PDBX_poly_seq_scheme.PDB_seq_num (PDBSeqNum)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.PDB_seq_num
Description	NMR-STAR name: _PDBX_poly_seq_scheme.PDB_seq_num PDB residue number.
Database field name	PDBSeqNum
SQL Database type	CHAR(12)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	PDB seq num
Examples	?
Help text

_PDBX_poly_seq_scheme.PDB_mon_ID (PDBMonID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.PDB_mon_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.PDB_mon_ID PDB residue name.
Database field name	PDBMonID
SQL Database type	CHAR(12)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	PDB mon ID
Examples	?
Help text

_PDBX_poly_seq_scheme.PDB_chain_ID (PDBChainID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.PDB_chain_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.PDB_chain_ID PDB strand/chain id.
Database field name	PDBChainID
SQL Database type	CHAR(12)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	PDB chain ID
Examples	?
Help text

_PDBX_poly_seq_scheme.PDB_ins_code (PDBInsCode)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.PDB_ins_code
Description	NMR-STAR name: _PDBX_poly_seq_scheme.PDB_ins_code PDB insertion code.
Database field name	PDBInsCode
SQL Database type	CHAR(12)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	PDB ins code
Examples	?
Help text

_PDBX_poly_seq_scheme.Auth_seq_num (AuthSeqNum)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Auth_seq_num
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Auth_seq_num Pointer to '_Atom_site.Auth_seq_ID'
Database field name	AuthSeqNum
SQL Database type	CHAR(12)
Part of primary Key	no
Foreign Key on table, column	Atom_site, Auth_seq_ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Auth seq num
Examples	?
Help text

_PDBX_poly_seq_scheme.Auth_mon_ID (AuthMonID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Auth_mon_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Auth_mon_ID Pointer to '_Atom_site.Auth_comp_ID'
Database field name	AuthMonID
SQL Database type	VARCHAR(15)
Part of primary Key	no
Foreign Key on table, column	Atom_site, Auth_comp_ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Auth mon ID
Examples	?
Help text

_PDBX_poly_seq_scheme.Sf_ID (SfID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Sf_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Sf_ID Pointer to '_Assembly.Sf_ID'
Database field name	SfID
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Assembly, Sf_ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	yes This field's data is for internal use only and should be hidden in public versiond of the data.
Nulls allowed in database?	yes
Prompt	Sf ID
Examples	?
Help text

_PDBX_poly_seq_scheme.Entry_ID (EntryID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Entry_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Entry_ID Pointer to '_Entry.ID'
Database field name	EntryID
SQL Database type	CHAR(12)
Part of primary Key	yes
Foreign Key on table, column	Assembly, Entry_ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Entry ID
Examples	?
Help text

_PDBX_poly_seq_scheme.Assembly_ID (AssemblyID)

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NMR-STAR tag name	_PDBX_poly_seq_scheme.Assembly_ID
Description	NMR-STAR name: _PDBX_poly_seq_scheme.Assembly_ID Pointer to '_Assembly.ID'
Database field name	AssemblyID
SQL Database type	INTEGER
Part of primary Key	yes
Foreign Key on table, column	Assembly, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Assembly ID
Examples	?
Help text