NMR-STAR dictionary: detail of TertiaryStruct table

NMR-STAR dictionary: database table: TertiaryStruct

Detailed description of the fields

_Tertiary_struct.ID (TertiaryStructID)

NMR-STAR tag name	_Tertiary_struct.ID
Description	NMR-STAR name: _Tertiary_struct.ID Unique identifier for the reported tertiary structure element.
Database field name	TertiaryStructID
SQL Database type	INTEGER
Part of primary Key	yes
Foreign Key on table, column	,
Saveframe ID	yes: This tag contains the identifier for this saveframe in the entry.
Row Index	yes: This tag contains the index of this row in the loop, which is used when the data is loaded into a database which has a relational model in which ordering doesn't matter
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	ID
Examples	8
Help text

_Tertiary_struct.Tertiary_struct_code (TertiaryStructCode)

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NMR-STAR tag name	_Tertiary_struct.Tertiary_struct_code
Description	NMR-STAR name: _Tertiary_struct.Tertiary_struct_code A word or very brief phrase that defines a specific type of local region of a biopolymer's tertiary structure.
Database field name	TertiaryStructCode
SQL Database type	VARCHAR(15)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Tertiary struct code
Examples	?
Help text

_Tertiary_struct.Tertiary_struct_name (TertiaryStructName)

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NMR-STAR tag name	_Tertiary_struct.Tertiary_struct_name
Description	NMR-STAR name: _Tertiary_struct.Tertiary_struct_name An author defined name for the tertiary structure element.
Database field name	TertiaryStructName
SQL Database type	VARCHAR(127)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Tertiary struct name
Examples	NADP binding site
Help text

_Tertiary_struct.Assembly_atom_ID (AssemblyAtomID)

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NMR-STAR tag name	_Tertiary_struct.Assembly_atom_ID
Description	NMR-STAR name: _Tertiary_struct.Assembly_atom_ID Pointer to '_Atom.Assembly_atom_ID'
Database field name	AssemblyAtomID
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Atom, Assembly_atom_ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Assembly atom ID
Examples	?
Help text

_Tertiary_struct.Entity_assembly_ID (EntityAssemblyID)

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NMR-STAR tag name	_Tertiary_struct.Entity_assembly_ID
Description	NMR-STAR name: _Tertiary_struct.Entity_assembly_ID Pointer to '_Entity_assembly.ID'
Database field name	EntityAssemblyID
SQL Database type	INTEGER
Part of primary Key	yes
Foreign Key on table, column	Entity_assembly, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Entity assembly ID
Examples	?
Help text

_Tertiary_struct.Entity_ID (EntityID)

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NMR-STAR tag name	_Tertiary_struct.Entity_ID
Description	NMR-STAR name: _Tertiary_struct.Entity_ID Pointer to '_Entity.ID'
Database field name	EntityID
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Entity, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Entity ID
Examples	?
Help text

_Tertiary_struct.Entity_label (EntityLabel)

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NMR-STAR tag name	_Tertiary_struct.Entity_label
Description	NMR-STAR name: _Tertiary_struct.Entity_label Pointer to a saveframe of the category 'entity'
Database field name	EntityLabel
SQL Database type	VARCHAR(127)
Part of primary Key	no
Foreign Key on table, column	Entity, Sf_framecode
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Entity label
Examples	?
Help text

_Tertiary_struct.Comp_index_ID (CompIndexID)

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NMR-STAR tag name	_Tertiary_struct.Comp_index_ID
Description	NMR-STAR name: _Tertiary_struct.Comp_index_ID Pointer to '_Entity_comp_index.ID'
Database field name	CompIndexID
SQL Database type	INTEGER
Part of primary Key	yes
Foreign Key on table, column	Entity_comp_index, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Comp index ID
Examples	24
Help text

_Tertiary_struct.Seq_ID (SeqID)

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NMR-STAR tag name	_Tertiary_struct.Seq_ID
Description	NMR-STAR name: _Tertiary_struct.Seq_ID Pointer to '_PDBX_poly_seq_scheme.Seq_ID'
Database field name	SeqID
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Entity_poly_seq, Num
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Seq ID
Examples	24
Help text

_Tertiary_struct.Comp_ID (CompID)

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NMR-STAR tag name	_Tertiary_struct.Comp_ID
Description	NMR-STAR name: _Tertiary_struct.Comp_ID Pointer to '_Chem_comp.ID'
Database field name	CompID
SQL Database type	CHAR(12)
Part of primary Key	no
Foreign Key on table, column	Chem_comp, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Comp ID
Examples	ALA
Help text

_Tertiary_struct.Atom_ID (AtomID)

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NMR-STAR tag name	_Tertiary_struct.Atom_ID
Description	NMR-STAR name: _Tertiary_struct.Atom_ID Pointer to '_Chem_comp_atom.Atom_ID'
Database field name	AtomID
SQL Database type	CHAR(12)
Part of primary Key	yes
Foreign Key on table, column	Chem_comp_atom, Atom_ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Atom ID
Examples	HA
Help text

_Tertiary_struct.Atom_type (AtomType)

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NMR-STAR tag name	_Tertiary_struct.Atom_type
Description	NMR-STAR name: _Tertiary_struct.Atom_type The value for this tag is a standard IUPAC abbreviation for a chemical element (i.e., H, C, P, etc).
Database field name	AtomType
SQL Database type	VARCHAR(15)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Atom type
Examples	H
Help text

_Tertiary_struct.Tertiary_struct_element_code (TertiaryStructElementCode)

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NMR-STAR tag name	_Tertiary_struct.Tertiary_struct_element_code
Description	NMR-STAR name: _Tertiary_struct.Tertiary_struct_element_code Code defining the type of tertiary structure element that is being defined.
Database field name	TertiaryStructElementCode
SQL Database type	VARCHAR(15)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Tertiary struct element code
Examples	?
Help text

_Tertiary_struct.Details (Details)

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NMR-STAR tag name	_Tertiary_struct.Details
Description	NMR-STAR name: _Tertiary_struct.Details Text providing additional information concerning the reported tertiary structure element.
Database field name	Details
SQL Database type	TEXT
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Details
Examples	?
Help text

_Tertiary_struct.Auth_entity_assembly_ID (AuthEntityAssemblyID)

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NMR-STAR tag name	_Tertiary_struct.Auth_entity_assembly_ID
Description	NMR-STAR name: _Tertiary_struct.Auth_entity_assembly_ID ?
Database field name	AuthEntityAssemblyID
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Auth entity assembly ID
Examples	2
Help text

_Tertiary_struct.Auth_seq_ID (AuthSeqID)

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NMR-STAR tag name	_Tertiary_struct.Auth_seq_ID
Description	NMR-STAR name: _Tertiary_struct.Auth_seq_ID An alternative identifier for Seq_id that may be provided by an author in order to match that used in the publication that describes the experimental data. Note that the value is not required to be a number and does not need to correspond to the value for Seq_ID or Comp_index_ID.
Database field name	AuthSeqID
SQL Database type	VARCHAR(15)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Auth seq ID
Examples	-3
Help text

_Tertiary_struct.Auth_comp_ID (AuthCompID)

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NMR-STAR tag name	_Tertiary_struct.Auth_comp_ID
Description	NMR-STAR name: _Tertiary_struct.Auth_comp_ID An alternative identifier for Comp_id that may be provided by an author in order to match that used in the publication that describes the experimental data.
Database field name	AuthCompID
SQL Database type	VARCHAR(15)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Auth comp ID
Examples	DPN
Help text

_Tertiary_struct.Auth_atom_ID (AuthAtomID)

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NMR-STAR tag name	_Tertiary_struct.Auth_atom_ID
Description	NMR-STAR name: _Tertiary_struct.Auth_atom_ID An alternative identifier for Atom_id that may be provided by an author in order to match that used in the publication that describes the experimental data.
Database field name	AuthAtomID
SQL Database type	VARCHAR(15)
Part of primary Key	no
Foreign Key on table, column	,
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	no
Prompt	Auth atom ID
Examples	HB1
Help text

_Tertiary_struct.Sf_ID (SfID)

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NMR-STAR tag name	_Tertiary_struct.Sf_ID
Description	NMR-STAR name: _Tertiary_struct.Sf_ID Pointer to '_Tertiary_struct_element_list.Sf_ID'
Database field name	SfID
SQL Database type	INTEGER
Part of primary Key	no
Foreign Key on table, column	Tertiary_struct_element_list, Sf_ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	yes This field's data is for internal use only and should be hidden in public versiond of the data.
Nulls allowed in database?	yes
Prompt	Sf ID
Examples	?
Help text

_Tertiary_struct.Entry_ID (EntryID)

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NMR-STAR tag name	_Tertiary_struct.Entry_ID
Description	NMR-STAR name: _Tertiary_struct.Entry_ID Pointer to '_Entry.ID'
Database field name	EntryID
SQL Database type	CHAR(12)
Part of primary Key	yes
Foreign Key on table, column	Entry, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Entry ID
Examples	?
Help text

_Tertiary_struct.Tertiary_struct_element_list_ID (TertiaryStructElementListID)

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NMR-STAR tag name	_Tertiary_struct.Tertiary_struct_element_list_ID
Description	NMR-STAR name: _Tertiary_struct.Tertiary_struct_element_list_ID Pointer to '_Tertiary_struct_element_list.ID'
Database field name	TertiaryStructElementListID
SQL Database type	INTEGER
Part of primary Key	yes
Foreign Key on table, column	Tertiary_struct_element_list, ID
Saveframe ID	no
Row Index	no
Secondary Index	no
Internal Flag	no
Nulls allowed in database?	yes
Prompt	Tertiary struct element list ID
Examples	1
Help text